RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 IFFO2Q5TF58 517 aa15.9■□□□□ 0.14
PCMTD1-208ENST00000544451 ATP6V1DQ9Y5K8 247 aa15.9■□□□□ 0.14
PCMTD1-208ENST00000544451 MAP3K4Q9Y6R4 1608 aa15.9■□□□□ 0.14
PCMTD1-208ENST00000544451 JARID2Q92833 1246 aaPredicted RBP15.9■□□□□ 0.14
PCMTD1-208ENST00000544451 PHAXQ9H814 394 aaKnown RBP15.9■□□□□ 0.14
PCMTD1-208ENST00000544451 TFIP11Q9UBB9 837 aaKnown RBP15.89■□□□□ 0.13
PCMTD1-208ENST00000544451 SPHKAPQ2M3C7 1700 aa15.89■□□□□ 0.13
PCMTD1-208ENST00000544451 CKAP2LQ8IYA6 745 aa15.89■□□□□ 0.13
PCMTD1-208ENST00000544451 FSD1Q9BTV5 496 aa15.89■□□□□ 0.13
PCMTD1-208ENST00000544451 RIMS2Q9UQ26 1411 aa15.88■□□□□ 0.13
PCMTD1-208ENST00000544451 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.88■□□□□ 0.13
PCMTD1-208ENST00000544451 NLRP1Q9C000 1473 aa15.88■□□□□ 0.13
PCMTD1-208ENST00000544451 CHD1O14646 1710 aa15.88■□□□□ 0.13
PCMTD1-208ENST00000544451 UNC5CLQ8IV45 518 aa15.88■□□□□ 0.13
PCMTD1-208ENST00000544451 CCDC8Q9H0W5 538 aaPredicted RBP15.88■□□□□ 0.13
PCMTD1-208ENST00000544451 ZCCHC11Q5TAX3 1644 aaKnown RBP15.88■□□□□ 0.13
PCMTD1-208ENST00000544451 NPHP1O15259 732 aa15.88■□□□□ 0.13
PCMTD1-208ENST00000544451 RUFY2Q8WXA3 655 aa15.88■□□□□ 0.13
PCMTD1-208ENST00000544451 CLASP1Q7Z460 1538 aa15.88■□□□□ 0.13
PCMTD1-208ENST00000544451 GNAT3A8MTJ3 354 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 ADCY5O95622 1261 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 G3BP1Q13283 466 aaKnown RBP eCLIP15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 FAM173BQ6P4H8 233 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 AACSQ86V21 672 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 AK9Q5TCS8 1911 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 PTPRCP08575 1304 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 MYOM2P54296 1465 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 PI4KAP2A4QPH2 592 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 LARP1BQ659C4 914 aaKnown RBP15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 PI4KAP1Q8N8J0 262 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 PUS7Q96PZ0 661 aaKnown RBP15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 KIF1BO60333 1816 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 CSB-PGBD3P0DP91 1061 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 CHMLP26374 656 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 FAM184AQ8NB25 1140 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 DDX11Q96FC9 970 aa15.87■□□□□ 0.13
PCMTD1-208ENST00000544451 TTC21BQ7Z4L5 1316 aa15.86■□□□□ 0.13
PCMTD1-208ENST00000544451 OFD1O75665 1012 aa15.86■□□□□ 0.13
PCMTD1-208ENST00000544451 MYL6BP14649 208 aa15.86■□□□□ 0.13
PCMTD1-208ENST00000544451 MPRIPQ6WCQ1 1025 aa15.86■□□□□ 0.13
PCMTD1-208ENST00000544451 TRIM5Q9C035 493 aa15.86■□□□□ 0.13
PCMTD1-208ENST00000544451 ZKSCAN5Q9Y2L8 839 aa15.86■□□□□ 0.13
PCMTD1-208ENST00000544451 C1orf141Q5JVX7 400 aa15.86■□□□□ 0.13
PCMTD1-208ENST00000544451 BOLA2Q9H3K6 86 aa15.86■□□□□ 0.13
PCMTD1-208ENST00000544451 PDRG1Q9NUG6 133 aa15.86■□□□□ 0.13
PCMTD1-208ENST00000544451 PA2G4Q9UQ80 394 aaKnown RBP15.86■□□□□ 0.13
PCMTD1-208ENST00000544451 DNAJC2Q99543 621 aaKnown RBP15.85■□□□□ 0.13
PCMTD1-208ENST00000544451 GOLGA6L6A8MZA4 724 aa15.85■□□□□ 0.13
PCMTD1-208ENST00000544451 CHL1O00533 1208 aa15.85■□□□□ 0.13
PCMTD1-208ENST00000544451 CBX1P83916 185 aa15.85■□□□□ 0.13
PCMTD1-208ENST00000544451 PDCL3Q9H2J4 239 aa15.85■□□□□ 0.13
PCMTD1-208ENST00000544451 CYP46A1Q9Y6A2 500 aa15.85■□□□□ 0.13
PCMTD1-208ENST00000544451 IQGAP1P46940 1657 aa15.85■□□□□ 0.13
PCMTD1-208ENST00000544451 LAMC1P11047 1609 aa15.84■□□□□ 0.13
PCMTD1-208ENST00000544451 DNM1Q05193 864 aaKnown RBP15.84■□□□□ 0.13
PCMTD1-208ENST00000544451 PSME1Q06323 249 aa15.84■□□□□ 0.13
PCMTD1-208ENST00000544451 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
PCMTD1-208ENST00000544451 POGZQ7Z3K3 1410 aa15.84■□□□□ 0.13
PCMTD1-208ENST00000544451 RIC3Q7Z5B4 369 aa15.84■□□□□ 0.13
PCMTD1-208ENST00000544451 EYA1Q99502 592 aa15.84■□□□□ 0.13
PCMTD1-208ENST00000544451 STX6O43752 255 aa15.83■□□□□ 0.13
PCMTD1-208ENST00000544451 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.83■□□□□ 0.13
PCMTD1-208ENST00000544451 GJB2P29033 226 aa15.83■□□□□ 0.12
PCMTD1-208ENST00000544451 ZNF530Q6P9A1 599 aaPredicted RBP15.83■□□□□ 0.12
PCMTD1-208ENST00000544451 RHPN1Q8TCX5 695 aa15.83■□□□□ 0.12
PCMTD1-208ENST00000544451 MAP3K19Q56UN5 1328 aa15.83■□□□□ 0.12
PCMTD1-208ENST00000544451 BECN2A8MW95 431 aa15.83■□□□□ 0.12
PCMTD1-208ENST00000544451 NEUROD6Q96NK8 337 aa15.83■□□□□ 0.12
PCMTD1-208ENST00000544451 FMNL2Q96PY5 1086 aa15.83■□□□□ 0.12
PCMTD1-208ENST00000544451 TET3O43151 1660 aa15.82■□□□□ 0.12
PCMTD1-208ENST00000544451 GOLGA6L19H0YKK7 550 aa15.82■□□□□ 0.12
PCMTD1-208ENST00000544451 AK2P54819 239 aa15.82■□□□□ 0.12
PCMTD1-208ENST00000544451 ZNF445P59923 1031 aa15.82■□□□□ 0.12
PCMTD1-208ENST00000544451 ZHX1Q9UKY1 873 aaPredicted RBP15.82■□□□□ 0.12
PCMTD1-208ENST00000544451 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
PCMTD1-208ENST00000544451 CHPF2Q9P2E5 772 aa15.82■□□□□ 0.12
PCMTD1-208ENST00000544451 RAB11FIP3O75154 756 aa15.81■□□□□ 0.12
PCMTD1-208ENST00000544451 PIP4K2AP48426 406 aaPredicted RBP15.81■□□□□ 0.12
PCMTD1-208ENST00000544451 LIMCH1Q9UPQ0 1083 aa15.81■□□□□ 0.12
PCMTD1-208ENST00000544451 IGSF3O75054 1194 aa15.81■□□□□ 0.12
PCMTD1-208ENST00000544451 ATP8B2P98198 1209 aa15.81■□□□□ 0.12
PCMTD1-208ENST00000544451 KIF1BPQ96EK5 621 aa15.81■□□□□ 0.12
PCMTD1-208ENST00000544451 CEP152O94986 1710 aa15.81■□□□□ 0.12
PCMTD1-208ENST00000544451 SASS6Q6UVJ0 657 aa15.81■□□□□ 0.12
PCMTD1-208ENST00000544451 IQSEC2Q5JU85 1478 aa15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 YEATS2Q9ULM3 1422 aa15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 ZNF853P0CG23 659 aa15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 CCDC183Q5T5S1 534 aa15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 ZDHHC9Q9Y397 364 aa15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 ZMYM3Q14202 1370 aa15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 BTBD11A6QL63 1104 aa15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 NBPF7P0C2Y1 421 aaPredicted RBP15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 SF3A1Q15459 793 aaKnown RBP15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 LRRC2Q9BYS8 371 aa15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 NOL7Q9UMY1 257 aaKnown RBP15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 AMOTL2Q9Y2J4 779 aa15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 PPP1R9BQ96SB3 815 aa15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 TNMDQ9H2S6 317 aa15.8■□□□□ 0.12
PCMTD1-208ENST00000544451 RNF17Q9BXT8 1623 aaKnown RBP15.79■□□□□ 0.12
PCMTD1-208ENST00000544451 ESCO1Q5FWF5 840 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms