RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 ADAM23O75077 832 aa7.61□□□□□ -1.19
CCDC170-203ENST00000544131 UBTFP17480 764 aaKnown RBP7.61□□□□□ -1.19
CCDC170-203ENST00000544131 MX2P20592 715 aa7.61□□□□□ -1.19
CCDC170-203ENST00000544131 SEMA3FQ13275 785 aa7.61□□□□□ -1.19
CCDC170-203ENST00000544131 RNF135Q8IUD6 432 aa7.61□□□□□ -1.19
CCDC170-203ENST00000544131 GRIP2Q9C0E4 1043 aa7.61□□□□□ -1.19
CCDC170-203ENST00000544131 OSBPL3Q9H4L5 887 aa7.61□□□□□ -1.19
CCDC170-203ENST00000544131 LRRC4BQ9NT99 713 aa7.61□□□□□ -1.19
CCDC170-203ENST00000544131 MYCP01106 439 aaPredicted RBP7.6□□□□□ -1.19
CCDC170-203ENST00000544131 PROCP04070 461 aa7.6□□□□□ -1.19
CCDC170-203ENST00000544131 CYP2U1Q7Z449 544 aa7.6□□□□□ -1.19
CCDC170-203ENST00000544131 PHTF2Q8N3S3 785 aa7.6□□□□□ -1.19
CCDC170-203ENST00000544131 SPATA31C2B4DYI2 1134 aa7.59□□□□□ -1.19
CCDC170-203ENST00000544131 XP32Q5T750 250 aa7.59□□□□□ -1.19
CCDC170-203ENST00000544131 WWC1Q8IX03 1113 aa7.59□□□□□ -1.19
CCDC170-203ENST00000544131 NUCKS1Q9H1E3 243 aaKnown RBP7.59□□□□□ -1.19
CCDC170-203ENST00000544131 ARHGEF10LQ9HCE6 1279 aa7.59□□□□□ -1.19
CCDC170-203ENST00000544131 NSFL1CQ9UNZ2 370 aaKnown RBP7.59□□□□□ -1.19
CCDC170-203ENST00000544131 DOLKQ9UPQ8 538 aa7.59□□□□□ -1.19
CCDC170-203ENST00000544131 WASLO00401 505 aaPredicted RBP7.58□□□□□ -1.2
CCDC170-203ENST00000544131 OIP5O43482 229 aa7.58□□□□□ -1.2
CCDC170-203ENST00000544131 TRAK2O60296 914 aa7.58□□□□□ -1.2
CCDC170-203ENST00000544131 OXLD1Q5BKU9 147 aa7.58□□□□□ -1.2
CCDC170-203ENST00000544131 WDR44Q5JSH3 913 aa7.58□□□□□ -1.2
CCDC170-203ENST00000544131 TAS1R3Q7RTX0 852 aa7.58□□□□□ -1.2
CCDC170-203ENST00000544131 GALNT6Q8NCL4 622 aa7.58□□□□□ -1.2
CCDC170-203ENST00000544131 TIMMDC1Q9NPL8 285 aa7.58□□□□□ -1.2
CCDC170-203ENST00000544131 RAB6BQ9NRW1 208 aa7.58□□□□□ -1.2
CCDC170-203ENST00000544131 F11P03951 625 aa7.57□□□□□ -1.2
CCDC170-203ENST00000544131 SOX11P35716 441 aa7.57□□□□□ -1.2
CCDC170-203ENST00000544131 USP4Q13107 963 aa7.57□□□□□ -1.2
CCDC170-203ENST00000544131 OXCT2Q9BYC2 517 aaPredicted RBP7.57□□□□□ -1.2
CCDC170-203ENST00000544131 THBS1P07996 1170 aa7.56□□□□□ -1.2
CCDC170-203ENST00000544131 GPAMQ9HCL2 828 aa7.56□□□□□ -1.2
CCDC170-203ENST00000544131 GNRH1P01148 92 aa7.55□□□□□ -1.2
CCDC170-203ENST00000544131 MAP2K3P46734 347 aa7.55□□□□□ -1.2
CCDC170-203ENST00000544131 SNRPNP63162 240 aaKnown RBP7.55□□□□□ -1.2
CCDC170-203ENST00000544131 SHISA8B8ZZ34 492 aa7.54□□□□□ -1.2
CCDC170-203ENST00000544131 PIK3CDO00329 1044 aa7.54□□□□□ -1.2
CCDC170-203ENST00000544131 PLPP7Q8NBV4 271 aa7.54□□□□□ -1.2
CCDC170-203ENST00000544131 CNKSR1Q969H4 720 aa7.54□□□□□ -1.2
CCDC170-203ENST00000544131 CHIC2Q9UKJ5 165 aa7.54□□□□□ -1.2
CCDC170-203ENST00000544131 POM121CA8CG34 1229 aa7.53□□□□□ -1.2
CCDC170-203ENST00000544131 STAU1O95793 577 aaKnown RBP7.53□□□□□ -1.2
CCDC170-203ENST00000544131 IL2RAP01589 272 aa7.53□□□□□ -1.2
CCDC170-203ENST00000544131 CENPCQ03188 943 aa7.53□□□□□ -1.2
CCDC170-203ENST00000544131 CLUAP1Q96AJ1 413 aa7.53□□□□□ -1.2
CCDC170-203ENST00000544131 SIRT1Q96EB6 747 aa7.53□□□□□ -1.2
CCDC170-203ENST00000544131 ESYT1Q9BSJ8 1104 aa7.53□□□□□ -1.2
CCDC170-203ENST00000544131 CFHR5Q9BXR6 569 aa7.53□□□□□ -1.2
CCDC170-203ENST00000544131 ALG2Q9H553 416 aa7.53□□□□□ -1.2
CCDC170-203ENST00000544131 KRBA1A5PL33 1030 aa7.52□□□□□ -1.21
CCDC170-203ENST00000544131 SKIP12755 728 aa7.52□□□□□ -1.21
CCDC170-203ENST00000544131 PHKA2P46019 1235 aa7.52□□□□□ -1.21
CCDC170-203ENST00000544131 MAP7D1Q3KQU3 841 aa7.52□□□□□ -1.21
CCDC170-203ENST00000544131 C1orf229Q6ZS94 237 aaPredicted RBP7.52□□□□□ -1.21
CCDC170-203ENST00000544131 KLRG1Q96E93 195 aa7.52□□□□□ -1.21
CCDC170-203ENST00000544131 XAGE2Q96GT9 111 aa7.52□□□□□ -1.21
CCDC170-203ENST00000544131 MKL2Q9ULH7 1088 aa7.52□□□□□ -1.21
CCDC170-203ENST00000544131 A0A1B0GTH6 734 aa7.51□□□□□ -1.21
CCDC170-203ENST00000544131 K7ELQ4 463 aaPredicted RBP7.51□□□□□ -1.21
CCDC170-203ENST00000544131 COL8A1P27658 744 aa7.51□□□□□ -1.21
CCDC170-203ENST00000544131 PHF24Q9UPV7 400 aa7.51□□□□□ -1.21
CCDC170-203ENST00000544131 BAG6P46379 1132 aa7.5□□□□□ -1.21
CCDC170-203ENST00000544131 UBAP2LQ14157 1087 aaKnown RBP7.5□□□□□ -1.21
CCDC170-203ENST00000544131 ESCO1Q5FWF5 840 aa7.5□□□□□ -1.21
CCDC170-203ENST00000544131 HDGFL1Q5TGJ6 251 aa7.5□□□□□ -1.21
CCDC170-203ENST00000544131 ZSCAN10Q96SZ4 725 aaPredicted RBP7.5□□□□□ -1.21
CCDC170-203ENST00000544131 RRAGCQ9HB90 399 aa7.5□□□□□ -1.21
CCDC170-203ENST00000544131 ETNK1Q9HBU6 452 aa7.5□□□□□ -1.21
CCDC170-203ENST00000544131 GDF2Q9UK05 429 aaPredicted RBP7.5□□□□□ -1.21
CCDC170-203ENST00000544131 GTF2E1P29083 439 aaPredicted RBP7.49□□□□□ -1.21
CCDC170-203ENST00000544131 HRH3Q9Y5N1 445 aa7.49□□□□□ -1.21
CCDC170-203ENST00000544131 EML3Q32P44 896 aa7.48□□□□□ -1.21
CCDC170-203ENST00000544131 GNASQ5JWF2 1037 aa7.48□□□□□ -1.21
CCDC170-203ENST00000544131 TMEM214Q6NUQ4 689 aaKnown RBP7.48□□□□□ -1.21
CCDC170-203ENST00000544131 ALYREFQ86V81 257 aaKnown RBP7.48□□□□□ -1.21
CCDC170-203ENST00000544131 DEPDC4Q8N2C3 294 aa7.48□□□□□ -1.21
CCDC170-203ENST00000544131 GOLGA6L1Q8N7Z2 621 aa7.48□□□□□ -1.21
CCDC170-203ENST00000544131 ADAMTS19Q8TE59 1207 aa7.48□□□□□ -1.21
CCDC170-203ENST00000544131 EDARADDQ8WWZ3 215 aa7.48□□□□□ -1.21
CCDC170-203ENST00000544131 FHDC1Q9C0D6 1143 aaPredicted RBP7.48□□□□□ -1.21
CCDC170-203ENST00000544131 RUBCNLQ9H714 662 aa7.48□□□□□ -1.21
CCDC170-203ENST00000544131 CSB-PGBD3P0DP91 1061 aa7.47□□□□□ -1.21
CCDC170-203ENST00000544131 GDF10P55107 478 aa7.47□□□□□ -1.21
CCDC170-203ENST00000544131 LBRQ14739 615 aaKnown RBP7.47□□□□□ -1.21
CCDC170-203ENST00000544131 C4orf17Q53FE4 359 aa7.47□□□□□ -1.21
CCDC170-203ENST00000544131 PROSER2Q86WR7 435 aaPredicted RBP7.47□□□□□ -1.21
CCDC170-203ENST00000544131 PGBD3Q8N328 593 aa7.47□□□□□ -1.21
CCDC170-203ENST00000544131 ABHD17AQ96GS6 310 aa7.47□□□□□ -1.21
CCDC170-203ENST00000544131 ATXN7L1Q9ULK2 861 aaPredicted RBP7.47□□□□□ -1.21
CCDC170-203ENST00000544131 C2CD2LO14523 706 aa7.46□□□□□ -1.22
CCDC170-203ENST00000544131 FURINP09958 794 aa7.46□□□□□ -1.22
CCDC170-203ENST00000544131 BMP4P12644 408 aa7.46□□□□□ -1.22
CCDC170-203ENST00000544131 HOXB4P17483 251 aaPredicted RBP7.46□□□□□ -1.22
CCDC170-203ENST00000544131 NCOA4Q13772 614 aa7.46□□□□□ -1.22
CCDC170-203ENST00000544131 GRIN2CQ14957 1233 aa7.46□□□□□ -1.22
CCDC170-203ENST00000544131 TLR1Q15399 786 aa7.46□□□□□ -1.22
CCDC170-203ENST00000544131 SLCO4C1Q6ZQN7 724 aa7.46□□□□□ -1.22
CCDC170-203ENST00000544131 NFATC2IPQ8NCF5 419 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms