RNA–Protein interactions for RNA: ENST00000544050.1

DYRK4-215, Transcript of dual specificity tyrosine phosphorylation regulated kinase 4, human

TSL 2

Gene DYRK4, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DYRK4-215	ENST00000544050	UTRN	P46939	3433 aa		13.87	□□□□□ -0.19
DYRK4-215	ENST00000544050	GPR162	Q16538	588 aa		13.87	□□□□□ -0.19
DYRK4-215	ENST00000544050	PLEKHF1	Q96S99	279 aa		13.87	□□□□□ -0.19
DYRK4-215	ENST00000544050	TAF1L	Q8IZX4	1826 aa		13.87	□□□□□ -0.19
DYRK4-215	ENST00000544050	MAPK8IP3	Q9UPT6	1336 aa		13.87	□□□□□ -0.19
DYRK4-215	ENST00000544050	PLEKHG2	Q9H7P9	1386 aa		13.86	□□□□□ -0.19
DYRK4-215	ENST00000544050	ITGB4	P16144	1822 aa		13.86	□□□□□ -0.19
DYRK4-215	ENST00000544050	KLHL34	Q8N239	644 aa		13.86	□□□□□ -0.19
DYRK4-215	ENST00000544050	EYA1	Q99502	592 aa		13.86	□□□□□ -0.19
DYRK4-215	ENST00000544050	PCDH11X	Q9BZA7	1347 aa		13.86	□□□□□ -0.19
DYRK4-215	ENST00000544050	PCDH11Y	Q9BZA8	1340 aa		13.86	□□□□□ -0.19
DYRK4-215	ENST00000544050	KCNQ4	P56696	695 aa		13.85	□□□□□ -0.19
DYRK4-215	ENST00000544050	CCDC146	Q8IYE0	955 aa		13.85	□□□□□ -0.19
DYRK4-215	ENST00000544050	C5	P01031	1676 aa		13.85	□□□□□ -0.19
DYRK4-215	ENST00000544050	APAF1	O14727	1248 aa		13.84	□□□□□ -0.19
DYRK4-215	ENST00000544050	PRKAR2B	P31323	418 aa		13.84	□□□□□ -0.19
DYRK4-215	ENST00000544050	SULT6B1	Q6IMI4	303 aa		13.84	□□□□□ -0.19
DYRK4-215	ENST00000544050	USHBP1	Q8N6Y0	703 aa		13.84	□□□□□ -0.19
DYRK4-215	ENST00000544050	FLAD1	Q8NFF5	587 aa		13.84	□□□□□ -0.19
DYRK4-215	ENST00000544050	MSH5	O43196	834 aa		13.83	□□□□□ -0.2
DYRK4-215	ENST00000544050	HMOX1	P09601	288 aa		13.83	□□□□□ -0.2
DYRK4-215	ENST00000544050	CCDC27	Q2M243	656 aa		13.83	□□□□□ -0.2
DYRK4-215	ENST00000544050	SMARCC1	Q92922	1105 aa	Predicted RBP	13.82	□□□□□ -0.2
DYRK4-215	ENST00000544050	PKD1L3	Q7Z443	1732 aa		13.81	□□□□□ -0.2
DYRK4-215	ENST00000544050	MPRIP	Q6WCQ1	1025 aa		13.81	□□□□□ -0.2
DYRK4-215	ENST00000544050	COL23A1	Q86Y22	540 aa	Predicted RBP	13.81	□□□□□ -0.2
DYRK4-215	ENST00000544050	AEBP1	Q8IUX7	1158 aa		13.81	□□□□□ -0.2
DYRK4-215	ENST00000544050	PELP1	Q8IZL8	1130 aa	Known RBP	13.81	□□□□□ -0.2
DYRK4-215	ENST00000544050	GRIN3B	O60391	1043 aa		13.8	□□□□□ -0.2
DYRK4-215	ENST00000544050	TMPO	P42166	694 aa	Known RBP	13.8	□□□□□ -0.2
DYRK4-215	ENST00000544050	NFE2L2	Q16236	605 aa		13.8	□□□□□ -0.2
DYRK4-215	ENST00000544050	ZNF521	Q96K83	1311 aa		13.8	□□□□□ -0.2
DYRK4-215	ENST00000544050	PALLD	Q8WX93	1383 aa		13.8	□□□□□ -0.2
DYRK4-215	ENST00000544050	LMOD3	Q0VAK6	560 aa		13.79	□□□□□ -0.2
DYRK4-215	ENST00000544050	SPG7	Q9UQ90	795 aa		13.79	□□□□□ -0.2
DYRK4-215	ENST00000544050	TOGARAM1	Q9Y4F4	1720 aa		13.78	□□□□□ -0.2
DYRK4-215	ENST00000544050	UBR3	Q6ZT12	1888 aa		13.78	□□□□□ -0.2
DYRK4-215	ENST00000544050	CYP27B1	O15528	508 aa		13.78	□□□□□ -0.2
DYRK4-215	ENST00000544050	NLGN2	Q8NFZ4	835 aa		13.78	□□□□□ -0.2
DYRK4-215	ENST00000544050	GAS2L2	Q8NHY3	880 aa		13.78	□□□□□ -0.2
DYRK4-215	ENST00000544050	C4B	P0C0L5	1744 aa		13.78	□□□□□ -0.2
DYRK4-215	ENST00000544050	C1QTNF8	P60827	252 aa		13.77	□□□□□ -0.21
DYRK4-215	ENST00000544050	NKX1-1	Q15270	411 aa	Predicted RBP	13.77	□□□□□ -0.21
DYRK4-215	ENST00000544050	WDR63	Q8IWG1	891 aa		13.77	□□□□□ -0.21
DYRK4-215	ENST00000544050	WWC1	Q8IX03	1113 aa		13.77	□□□□□ -0.21
DYRK4-215	ENST00000544050	PHACTR3	Q96KR7	559 aa		13.77	□□□□□ -0.21
DYRK4-215	ENST00000544050	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
DYRK4-215	ENST00000544050	CD2AP	Q9Y5K6	639 aa		13.77	□□□□□ -0.21
DYRK4-215	ENST00000544050	GOLGA2	Q08379	1002 aa		13.76	□□□□□ -0.21
DYRK4-215	ENST00000544050	AMOT	Q4VCS5	1084 aa		13.76	□□□□□ -0.21
DYRK4-215	ENST00000544050	AK7	Q96M32	723 aa		13.76	□□□□□ -0.21
DYRK4-215	ENST00000544050	IL16	Q14005	1332 aa		13.75	□□□□□ -0.21
DYRK4-215	ENST00000544050	RIPK4	P57078	832 aa		13.75	□□□□□ -0.21
DYRK4-215	ENST00000544050	CALD1	Q05682	793 aa	Known RBP	13.75	□□□□□ -0.21
DYRK4-215	ENST00000544050	MSL1	Q68DK7	614 aa		13.75	□□□□□ -0.21
DYRK4-215	ENST00000544050	PIGB	Q92521	554 aa		13.75	□□□□□ -0.21
DYRK4-215	ENST00000544050	RRP7A	Q9Y3A4	280 aa	Known RBP	13.75	□□□□□ -0.21
DYRK4-215	ENST00000544050	HTATSF1	O43719	755 aa	Known RBP	13.74	□□□□□ -0.21
DYRK4-215	ENST00000544050	GIGYF1	O75420	1035 aa	Predicted RBP	13.74	□□□□□ -0.21
DYRK4-215	ENST00000544050	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.74	□□□□□ -0.21
DYRK4-215	ENST00000544050	SALL2	Q9Y467	1007 aa	Predicted RBP	13.74	□□□□□ -0.21
DYRK4-215	ENST00000544050	SENP3-EIF4A1	A0A087X0R7	540 aa		13.73	□□□□□ -0.21
DYRK4-215	ENST00000544050		E9PSI1	815 aa		13.73	□□□□□ -0.21
DYRK4-215	ENST00000544050	NEUROD2	Q15784	382 aa		13.73	□□□□□ -0.21
DYRK4-215	ENST00000544050	IFNL2	Q8IZJ0	200 aa		13.73	□□□□□ -0.21
DYRK4-215	ENST00000544050	TMOD3	Q9NYL9	352 aa		13.73	□□□□□ -0.21
DYRK4-215	ENST00000544050	TRIM35	Q9UPQ4	493 aa		13.73	□□□□□ -0.21
DYRK4-215	ENST00000544050	LOC102724428	A0A0B4J2F2	783 aa		13.72	□□□□□ -0.21
DYRK4-215	ENST00000544050	YBX3	P16989	372 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
DYRK4-215	ENST00000544050	SSFA2	P28290	1259 aa		13.72	□□□□□ -0.21
DYRK4-215	ENST00000544050	SIK1	P57059	783 aa		13.72	□□□□□ -0.21
DYRK4-215	ENST00000544050	MTHFSD	Q2M296	383 aa	Known RBP	13.72	□□□□□ -0.21
DYRK4-215	ENST00000544050	GOLGB1	Q14789	3259 aa	Known RBP	13.72	□□□□□ -0.21
DYRK4-215	ENST00000544050	SLFN5	Q08AF3	891 aa		13.71	□□□□□ -0.21
DYRK4-215	ENST00000544050	DLG5	Q8TDM6	1919 aa		13.7	□□□□□ -0.22
DYRK4-215	ENST00000544050	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.7	□□□□□ -0.22
DYRK4-215	ENST00000544050	GNAT3	A8MTJ3	354 aa		13.7	□□□□□ -0.22
DYRK4-215	ENST00000544050	PHF14	O94880	888 aa		13.7	□□□□□ -0.22
DYRK4-215	ENST00000544050	PHKG2	P15735	406 aa		13.7	□□□□□ -0.22
DYRK4-215	ENST00000544050	TRMT2A	Q8IZ69	625 aa	Known RBP	13.7	□□□□□ -0.22
DYRK4-215	ENST00000544050	RTF1	Q92541	710 aa	Known RBP	13.7	□□□□□ -0.22
DYRK4-215	ENST00000544050	MYH16	Q9H6N6	1097 aa		13.7	□□□□□ -0.22
DYRK4-215	ENST00000544050	HSP90AB1	P08238	724 aa	Known RBP	13.69	□□□□□ -0.22
DYRK4-215	ENST00000544050	ATP6V1A	P38606	617 aa		13.69	□□□□□ -0.22
DYRK4-215	ENST00000544050	AKAP4	Q5JQC9	854 aa		13.69	□□□□□ -0.22
DYRK4-215	ENST00000544050	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.69	□□□□□ -0.22
DYRK4-215	ENST00000544050	C1orf141	Q5JVX7	400 aa		13.68	□□□□□ -0.22
DYRK4-215	ENST00000544050	LINC00116	Q8NCU8	138 aa		13.68	□□□□□ -0.22
DYRK4-215	ENST00000544050	ASAP1	Q9ULH1	1129 aa		13.68	□□□□□ -0.22
DYRK4-215	ENST00000544050	ZNF831	Q5JPB2	1677 aa		13.68	□□□□□ -0.22
DYRK4-215	ENST00000544050	ERVV-2	B6SEH9	535 aa		13.67	□□□□□ -0.22
DYRK4-215	ENST00000544050	GNPAT	O15228	680 aa		13.67	□□□□□ -0.22
DYRK4-215	ENST00000544050	GNAI1	P63096	354 aa		13.67	□□□□□ -0.22
DYRK4-215	ENST00000544050	DUSP27	Q5VZP5	1158 aa		13.67	□□□□□ -0.22
DYRK4-215	ENST00000544050	CDCA7L	Q96GN5	454 aa		13.67	□□□□□ -0.22
DYRK4-215	ENST00000544050	IFT57	Q9NWB7	429 aa		13.67	□□□□□ -0.22
DYRK4-215	ENST00000544050	ITPK1	Q13572	414 aa		13.66	□□□□□ -0.22
DYRK4-215	ENST00000544050	AMIGO3	Q86WK7	504 aa		13.66	□□□□□ -0.22
DYRK4-215	ENST00000544050	ATG3	Q9NT62	314 aa		13.66	□□□□□ -0.22
DYRK4-215	ENST00000544050	CEMIP	Q8WUJ3	1361 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms