RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 TXNRD1Q16881 649 aa19.97■□□□□ 0.79
CD9-210ENST00000543916 SLC52A2Q9HAB3 445 aa19.97■□□□□ 0.79
CD9-210ENST00000543916 ASAP1Q9ULH1 1129 aa19.97■□□□□ 0.79
CD9-210ENST00000543916 DCTN1Q14203 1278 aa19.96■□□□□ 0.79
CD9-210ENST00000543916 MCM10Q7L590 875 aa19.96■□□□□ 0.79
CD9-210ENST00000543916 TAF1LQ8IZX4 1826 aa19.96■□□□□ 0.79
CD9-210ENST00000543916 C5P01031 1676 aa19.96■□□□□ 0.79
CD9-210ENST00000543916 UBR2Q8IWV8 1755 aa19.95■□□□□ 0.78
CD9-210ENST00000543916 TMPOP42166 694 aaKnown RBP19.95■□□□□ 0.78
CD9-210ENST00000543916 ATG3Q9NT62 314 aa19.95■□□□□ 0.78
CD9-210ENST00000543916 ZNF831Q5JPB2 1677 aa19.94■□□□□ 0.78
CD9-210ENST00000543916 HTATSF1O43719 755 aaKnown RBP19.94■□□□□ 0.78
CD9-210ENST00000543916 MIER1Q8N108 512 aa19.94■□□□□ 0.78
CD9-210ENST00000543916 RTF1Q92541 710 aaKnown RBP19.94■□□□□ 0.78
CD9-210ENST00000543916 SMARCC1Q92922 1105 aaPredicted RBP19.94■□□□□ 0.78
CD9-210ENST00000543916 LRRC4BQ9NT99 713 aa19.94■□□□□ 0.78
CD9-210ENST00000543916 RRP7AQ9Y3A4 280 aaKnown RBP19.94■□□□□ 0.78
CD9-210ENST00000543916 KCNQ4P56696 695 aa19.93■□□□□ 0.78
CD9-210ENST00000543916 TEFQ10587 303 aa19.93■□□□□ 0.78
CD9-210ENST00000543916 CCER2I3L3R5 266 aa19.92■□□□□ 0.78
CD9-210ENST00000543916 RIPK4P57078 832 aa19.92■□□□□ 0.78
CD9-210ENST00000543916 TJP1Q07157 1748 aa19.92■□□□□ 0.78
CD9-210ENST00000543916 KCPQ6ZWJ8 1503 aa19.92■□□□□ 0.78
CD9-210ENST00000543916 CICQ96RK0 1608 aaPredicted RBP19.91■□□□□ 0.78
CD9-210ENST00000543916 NEUROD2Q15784 382 aa19.91■□□□□ 0.78
CD9-210ENST00000543916 SLC27A3Q5K4L6 730 aa19.91■□□□□ 0.78
CD9-210ENST00000543916 FAM9BQ8IZU0 186 aa19.91■□□□□ 0.78
CD9-210ENST00000543916 THUMPD2Q9BTF0 503 aaKnown RBP19.91■□□□□ 0.78
CD9-210ENST00000543916 CCNL1Q9UK58 526 aaPredicted RBP19.91■□□□□ 0.78
CD9-210ENST00000543916 KDM3BQ7LBC6 1761 aa19.9■□□□□ 0.78
CD9-210ENST00000543916 TUBGCP6Q96RT7 1819 aa19.9■□□□□ 0.78
CD9-210ENST00000543916 APAF1O14727 1248 aa19.9■□□□□ 0.78
CD9-210ENST00000543916 COL5A3P25940 1745 aaPredicted RBP19.9■□□□□ 0.78
CD9-210ENST00000543916 SLC39A6Q13433 755 aa19.89■□□□□ 0.77
CD9-210ENST00000543916 ANO8Q9HCE9 1232 aaPredicted RBP19.89■□□□□ 0.77
CD9-210ENST00000543916 C4BP0C0L5 1744 aa19.88■□□□□ 0.77
CD9-210ENST00000543916 LOC102724428A0A0B4J2F2 783 aa19.88■□□□□ 0.77
CD9-210ENST00000543916 SIK1P57059 783 aa19.88■□□□□ 0.77
CD9-210ENST00000543916 SLC4A9Q96Q91 983 aa19.88■□□□□ 0.77
CD9-210ENST00000543916 TRIM35Q9UPQ4 493 aa19.88■□□□□ 0.77
CD9-210ENST00000543916 RBM42Q9BTD8 480 aaKnown RBP19.87■□□□□ 0.77
CD9-210ENST00000543916 QSER1Q2KHR3 1735 aa19.86■□□□□ 0.77
CD9-210ENST00000543916 SENP3-EIF4A1A0A087X0R7 540 aa19.86■□□□□ 0.77
CD9-210ENST00000543916 PTCD1O75127 700 aaKnown RBP19.86■□□□□ 0.77
CD9-210ENST00000543916 LMOD3Q0VAK6 560 aa19.86■□□□□ 0.77
CD9-210ENST00000543916 BTBD11A6QL63 1104 aa19.85■□□□□ 0.77
CD9-210ENST00000543916 ITPK1Q13572 414 aa19.85■□□□□ 0.77
CD9-210ENST00000543916 ATP6V1AP38606 617 aa19.84■□□□□ 0.77
CD9-210ENST00000543916 TAF7Q15545 349 aaPredicted RBP19.84■□□□□ 0.77
CD9-210ENST00000543916 ZNF827Q17R98 1081 aa19.84■□□□□ 0.77
CD9-210ENST00000543916 NBPF14Q5TI25 921 aa19.84■□□□□ 0.77
CD9-210ENST00000543916 ZNF790Q6PG37 636 aa19.84■□□□□ 0.77
CD9-210ENST00000543916 PSDA5PKW4 1024 aaPredicted RBP19.83■□□□□ 0.77
CD9-210ENST00000543916 KCNQ3O43525 872 aa19.83■□□□□ 0.77
CD9-210ENST00000543916 R3HDM1Q15032 1099 aaKnown RBP19.83■□□□□ 0.77
CD9-210ENST00000543916 CASZ1Q86V15 1759 aa19.83■□□□□ 0.76
CD9-210ENST00000543916 UBR3Q6ZT12 1888 aa19.82■□□□□ 0.76
CD9-210ENST00000543916 TTC5Q8N0Z6 440 aa19.82■□□□□ 0.76
CD9-210ENST00000543916 LINC00116Q8NCU8 138 aa19.82■□□□□ 0.76
CD9-210ENST00000543916 AKT1S1Q96B36 256 aa19.82■□□□□ 0.76
CD9-210ENST00000543916 STK32BQ9NY57 414 aa19.82■□□□□ 0.76
CD9-210ENST00000543916 MIS18AQ9NYP9 233 aa19.82■□□□□ 0.76
CD9-210ENST00000543916 SLC15A2Q16348 729 aa19.81■□□□□ 0.76
CD9-210ENST00000543916 ZNF496Q96IT1 587 aaPredicted RBP19.81■□□□□ 0.76
CD9-210ENST00000543916 LAMB4A4D0S4 1761 aa19.79■□□□□ 0.76
CD9-210ENST00000543916 HEG1Q9ULI3 1381 aa19.79■□□□□ 0.76
CD9-210ENST00000543916 MYH14Q7Z406 1995 aaKnown RBP19.79■□□□□ 0.76
CD9-210ENST00000543916 CCDC27Q2M243 656 aa19.77■□□□□ 0.76
CD9-210ENST00000543916 DNAJC10Q8IXB1 793 aa19.77■□□□□ 0.76
CD9-210ENST00000543916 VSIG10Q8N0Z9 540 aa19.77■□□□□ 0.76
CD9-210ENST00000543916 FMNL2Q96PY5 1086 aa19.77■□□□□ 0.76
CD9-210ENST00000543916 TSPYL4Q9UJ04 414 aa19.76■□□□□ 0.75
CD9-210ENST00000543916 NCBP3Q53F19 620 aaKnown RBP19.75■□□□□ 0.75
CD9-210ENST00000543916 AMIGO3Q86WK7 504 aa19.75■□□□□ 0.75
CD9-210ENST00000543916 WWC1Q8IX03 1113 aa19.75■□□□□ 0.75
CD9-210ENST00000543916 AK7Q96M32 723 aa19.75■□□□□ 0.75
CD9-210ENST00000543916 PDGFDQ9GZP0 370 aaPredicted RBP19.75■□□□□ 0.75
CD9-210ENST00000543916 TFCP2L1Q9NZI6 479 aa19.75■□□□□ 0.75
CD9-210ENST00000543916 SALL2Q9Y467 1007 aaPredicted RBP19.75■□□□□ 0.75
CD9-210ENST00000543916 LAS1LQ9Y4W2 734 aaKnown RBP19.75■□□□□ 0.75
CD9-210ENST00000543916 PNPLA7Q6ZV29 1317 aa19.75■□□□□ 0.75
CD9-210ENST00000543916 CNTNAP4Q9C0A0 1308 aa19.75■□□□□ 0.75
CD9-210ENST00000543916 HMGB2P26583 209 aaKnown RBP19.74■□□□□ 0.75
CD9-210ENST00000543916 BABAM1Q9NWV8 329 aa19.74■□□□□ 0.75
CD9-210ENST00000543916 C4AP0C0L4 1744 aa19.73■□□□□ 0.75
CD9-210ENST00000543916 PRAMEF22A3QJZ6 481 aa19.73■□□□□ 0.75
CD9-210ENST00000543916 CHL1O00533 1208 aa19.73■□□□□ 0.75
CD9-210ENST00000543916 CYP19A1P11511 503 aaPredicted RBP19.73■□□□□ 0.75
CD9-210ENST00000543916 CRKLP46109 303 aaKnown RBP19.73■□□□□ 0.75
CD9-210ENST00000543916 EIF4A1P60842 406 aaKnown RBP19.73■□□□□ 0.75
CD9-210ENST00000543916 SMIM5Q71RC9 77 aa19.73■□□□□ 0.75
CD9-210ENST00000543916 GNPATO15228 680 aa19.72■□□□□ 0.75
CD9-210ENST00000543916 ZNF853P0CG23 659 aa19.72■□□□□ 0.75
CD9-210ENST00000543916 RC3H1Q5TC82 1133 aaKnown RBP19.72■□□□□ 0.75
CD9-210ENST00000543916 CFAP44Q96MT7 982 aa19.72■□□□□ 0.75
CD9-210ENST00000543916 CALD1Q05682 793 aaKnown RBP19.71■□□□□ 0.75
CD9-210ENST00000543916 INTS5Q6P9B9 1019 aaKnown RBP19.71■□□□□ 0.75
CD9-210ENST00000543916 SNRPA1P09661 255 aaKnown RBP19.7■□□□□ 0.74
CD9-210ENST00000543916 MBIPQ9NS73 344 aa19.7■□□□□ 0.74
CD9-210ENST00000543916 CCDC87Q9NVE4 849 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms