RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 MCM4P33991 863 aa21.97■■□□□ 1.11
PTPN6-222ENST00000543744 XPCQ01831 940 aaPredicted RBP21.97■■□□□ 1.11
PTPN6-222ENST00000543744 LRRC59Q96AG4 307 aaKnown RBP21.97■■□□□ 1.11
PTPN6-222ENST00000543744 PHRF1Q9P1Y6 1649 aaKnown RBP21.97■■□□□ 1.11
PTPN6-222ENST00000543744 PXDNLA1KZ92 1463 aa21.97■■□□□ 1.11
PTPN6-222ENST00000543744 CACNA1FO60840 1977 aa21.97■■□□□ 1.11
PTPN6-222ENST00000543744 ATP8B2P98198 1209 aa21.97■■□□□ 1.11
PTPN6-222ENST00000543744 PLEKHO1Q53GL0 409 aaPredicted RBP21.97■■□□□ 1.11
PTPN6-222ENST00000543744 DDIT3P35638 169 aa21.96■■□□□ 1.11
PTPN6-222ENST00000543744 AKAP4Q5JQC9 854 aa21.96■■□□□ 1.11
PTPN6-222ENST00000543744 ARHGEF25Q86VW2 580 aa21.96■■□□□ 1.11
PTPN6-222ENST00000543744 CHMP4AQ9BY43 222 aa21.96■■□□□ 1.11
PTPN6-222ENST00000543744 OSBPL3Q9H4L5 887 aa21.96■■□□□ 1.11
PTPN6-222ENST00000543744 EXOC6BQ9Y2D4 811 aa21.96■■□□□ 1.11
PTPN6-222ENST00000543744 EIF4A1P60842 406 aaKnown RBP21.96■■□□□ 1.11
PTPN6-222ENST00000543744 LMOD2Q6P5Q4 547 aa21.96■■□□□ 1.11
PTPN6-222ENST00000543744 ZNF530Q6P9A1 599 aaPredicted RBP21.96■■□□□ 1.11
PTPN6-222ENST00000543744 K7ELQ4 463 aaPredicted RBP21.95■■□□□ 1.1
PTPN6-222ENST00000543744 HOXB7P09629 217 aa21.95■■□□□ 1.1
PTPN6-222ENST00000543744 TEFQ10587 303 aa21.95■■□□□ 1.1
PTPN6-222ENST00000543744 AMOTQ4VCS5 1084 aa21.95■■□□□ 1.1
PTPN6-222ENST00000543744 RBM42Q9BTD8 480 aaKnown RBP21.95■■□□□ 1.1
PTPN6-222ENST00000543744 USP26Q9BXU7 913 aa21.95■■□□□ 1.1
PTPN6-222ENST00000543744 MED1Q15648 1581 aaPredicted RBP21.95■■□□□ 1.1
PTPN6-222ENST00000543744 PDE1AP54750 535 aa21.94■■□□□ 1.1
PTPN6-222ENST00000543744 LRRCC1Q9C099 1032 aa21.94■■□□□ 1.1
PTPN6-222ENST00000543744 PHAXQ9H814 394 aaKnown RBP21.94■■□□□ 1.1
PTPN6-222ENST00000543744 PNMA6EA0A0J9YXQ4 647 aa21.94■■□□□ 1.1
PTPN6-222ENST00000543744 PLEKHG5O94827 1062 aa21.94■■□□□ 1.1
PTPN6-222ENST00000543744 CD2BP2O95400 341 aaKnown RBP21.94■■□□□ 1.1
PTPN6-222ENST00000543744 EIF2S2P20042 333 aaKnown RBP21.94■■□□□ 1.1
PTPN6-222ENST00000543744 USP44Q9H0E7 712 aa21.94■■□□□ 1.1
PTPN6-222ENST00000543744 CIZ1Q9ULV3 898 aaPredicted RBP21.94■■□□□ 1.1
PTPN6-222ENST00000543744 LRRFIP2Q9Y608 721 aaKnown RBP21.94■■□□□ 1.1
PTPN6-222ENST00000543744 SLIT3O75094 1523 aa21.93■■□□□ 1.1
PTPN6-222ENST00000543744 HSP90AA1P07900 732 aaKnown RBP21.93■■□□□ 1.1
PTPN6-222ENST00000543744 UBTFL1P0CB47 393 aaPredicted RBP21.93■■□□□ 1.1
PTPN6-222ENST00000543744 RABEP1Q15276 862 aa21.92■■□□□ 1.1
PTPN6-222ENST00000543744 PROSER2Q86WR7 435 aaPredicted RBP21.92■■□□□ 1.1
PTPN6-222ENST00000543744 BTBD11A6QL63 1104 aa21.92■■□□□ 1.1
PTPN6-222ENST00000543744 C1orf141Q5JVX7 400 aa21.91■■□□□ 1.1
PTPN6-222ENST00000543744 MPRIPQ6WCQ1 1025 aa21.91■■□□□ 1.1
PTPN6-222ENST00000543744 ANKRD24Q8TF21 1146 aa21.91■■□□□ 1.1
PTPN6-222ENST00000543744 REC8O95072 547 aa21.9■■□□□ 1.1
PTPN6-222ENST00000543744 KRT28Q7Z3Y7 464 aa21.9■■□□□ 1.1
PTPN6-222ENST00000543744 SRCIN1Q9C0H9 1055 aa21.9■■□□□ 1.1
PTPN6-222ENST00000543744 RGPD2P0DJD1 1756 aa21.9■■□□□ 1.1
PTPN6-222ENST00000543744 N4BP2Q86UW6 1770 aaPredicted RBP21.9■■□□□ 1.1
PTPN6-222ENST00000543744 IBTKQ9P2D0 1353 aaPredicted RBP21.9■■□□□ 1.1
PTPN6-222ENST00000543744 CHPF2Q9P2E5 772 aa21.9■■□□□ 1.1
PTPN6-222ENST00000543744 LMO7Q8WWI1 1683 aa21.9■■□□□ 1.1
PTPN6-222ENST00000543744 KDM3BQ7LBC6 1761 aa21.89■■□□□ 1.09
PTPN6-222ENST00000543744 NCAPD2Q15021 1401 aa21.89■■□□□ 1.09
PTPN6-222ENST00000543744 KCNQ3O43525 872 aa21.89■■□□□ 1.09
PTPN6-222ENST00000543744 SALL3Q9BXA9 1300 aa21.88■■□□□ 1.09
PTPN6-222ENST00000543744 ERC2O15083 957 aa21.88■■□□□ 1.09
PTPN6-222ENST00000543744 RNMTO43148 476 aaKnown RBP21.88■■□□□ 1.09
PTPN6-222ENST00000543744 MX1P20591 662 aa21.88■■□□□ 1.09
PTPN6-222ENST00000543744 C19orf44Q9H6X5 657 aa21.87■■□□□ 1.09
PTPN6-222ENST00000543744 DDX11L8A8MPP1 907 aa21.87■■□□□ 1.09
PTPN6-222ENST00000543744 SSH3Q8TE77 659 aa21.86■■□□□ 1.09
PTPN6-222ENST00000543744 FOXD4L1Q9NU39 408 aa21.86■■□□□ 1.09
PTPN6-222ENST00000543744 C1orf167Q5SNV9 1468 aa21.86■■□□□ 1.09
PTPN6-222ENST00000543744 DNAAF4Q8WXU2 420 aa21.85■■□□□ 1.09
PTPN6-222ENST00000543744 TNPO1Q92973 898 aaKnown RBP21.85■■□□□ 1.09
PTPN6-222ENST00000543744 AXIN2Q9Y2T1 843 aa21.85■■□□□ 1.09
PTPN6-222ENST00000543744 RAB3GAP1Q15042 981 aa21.85■■□□□ 1.09
PTPN6-222ENST00000543744 TSHZ3Q63HK5 1081 aa21.85■■□□□ 1.09
PTPN6-222ENST00000543744 OVOS2A0A0G2JMS6 1433 aa21.85■■□□□ 1.09
PTPN6-222ENST00000543744 PXDNQ92626 1479 aa21.85■■□□□ 1.09
PTPN6-222ENST00000543744 TRPM3Q9HCF6 1732 aaPredicted RBP21.84■■□□□ 1.09
PTPN6-222ENST00000543744 PI4KAP2A4QPH2 592 aa21.84■■□□□ 1.09
PTPN6-222ENST00000543744 PI4KAP1Q8N8J0 262 aa21.84■■□□□ 1.09
PTPN6-222ENST00000543744 TRAK2O60296 914 aa21.84■■□□□ 1.09
PTPN6-222ENST00000543744 KIF1AQ12756 1690 aa21.84■■□□□ 1.09
PTPN6-222ENST00000543744 BEND3Q5T5X7 828 aa21.84■■□□□ 1.09
PTPN6-222ENST00000543744 PPP1R42Q7Z4L9 355 aa21.84■■□□□ 1.09
PTPN6-222ENST00000543744 STAP2Q9UGK3 403 aa21.84■■□□□ 1.09
PTPN6-222ENST00000543744 BRPF3Q9ULD4 1205 aa21.84■■□□□ 1.09
PTPN6-222ENST00000543744 IL27Q8NEV9 243 aa21.83■■□□□ 1.09
PTPN6-222ENST00000543744 GBP4Q96PP9 640 aa21.83■■□□□ 1.09
PTPN6-222ENST00000543744 DBF4Q9UBU7 674 aaPredicted RBP21.83■■□□□ 1.09
PTPN6-222ENST00000543744 RAB11FIP3O75154 756 aa21.82■■□□□ 1.08
PTPN6-222ENST00000543744 POLA2Q14181 598 aa21.82■■□□□ 1.08
PTPN6-222ENST00000543744 ANXA1P04083 346 aa21.81■■□□□ 1.08
PTPN6-222ENST00000543744 NBPF7P0C2Y1 421 aaPredicted RBP21.81■■□□□ 1.08
PTPN6-222ENST00000543744 ST18O60284 1047 aa21.8■■□□□ 1.08
PTPN6-222ENST00000543744 SURF6O75683 361 aaKnown RBP21.8■■□□□ 1.08
PTPN6-222ENST00000543744 MST1RQ04912 1400 aa21.8■■□□□ 1.08
PTPN6-222ENST00000543744 AOX1Q06278 1338 aa21.8■■□□□ 1.08
PTPN6-222ENST00000543744 TRIM6-TRIM34B2RNG4 842 aa21.8■■□□□ 1.08
PTPN6-222ENST00000543744 SRGAP3O43295 1099 aa21.8■■□□□ 1.08
PTPN6-222ENST00000543744 GIGYF1O75420 1035 aaPredicted RBP21.8■■□□□ 1.08
PTPN6-222ENST00000543744 ZC3H6P61129 1189 aaKnown RBP21.8■■□□□ 1.08
PTPN6-222ENST00000543744 CAMTA1Q9Y6Y1 1673 aa21.8■■□□□ 1.08
PTPN6-222ENST00000543744 ADCY9O60503 1353 aa21.79■■□□□ 1.08
PTPN6-222ENST00000543744 ERBB3P21860 1342 aa21.79■■□□□ 1.08
PTPN6-222ENST00000543744 L1TD1Q5T7N2 865 aaKnown RBP21.79■■□□□ 1.08
PTPN6-222ENST00000543744 RILPL2Q969X0 211 aa21.79■■□□□ 1.08
PTPN6-222ENST00000543744 ESYT1Q9BSJ8 1104 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms