RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 PXDNQ92626 1479 aa9.94□□□□□ -0.82
TRIM59-208ENST00000543469 TCERG1O14776 1098 aaKnown RBP9.94□□□□□ -0.82
TRIM59-208ENST00000543469 UBTFL1P0CB47 393 aaPredicted RBP9.94□□□□□ -0.82
TRIM59-208ENST00000543469 GTF2E1P29083 439 aaPredicted RBP9.94□□□□□ -0.82
TRIM59-208ENST00000543469 CLUAP1Q96AJ1 413 aa9.94□□□□□ -0.82
TRIM59-208ENST00000543469 AHDC1Q5TGY3 1603 aaPredicted RBP9.94□□□□□ -0.82
TRIM59-208ENST00000543469 VPS72Q15906 364 aa9.94□□□□□ -0.82
TRIM59-208ENST00000543469 BARGINQ6ZT62 677 aa9.94□□□□□ -0.82
TRIM59-208ENST00000543469 DDX17Q92841 729 aaKnown RBP9.94□□□□□ -0.82
TRIM59-208ENST00000543469 ZNF330Q9Y3S2 320 aaPredicted RBP9.93□□□□□ -0.82
TRIM59-208ENST00000543469 MVPQ14764 893 aaKnown RBP9.93□□□□□ -0.82
TRIM59-208ENST00000543469 GNAI2P04899 355 aa9.93□□□□□ -0.82
TRIM59-208ENST00000543469 ANP32AP39687 249 aaKnown RBP9.93□□□□□ -0.82
TRIM59-208ENST00000543469 RPAP2Q8IXW5 612 aaPredicted RBP9.93□□□□□ -0.82
TRIM59-208ENST00000543469 GCC1Q96CN9 775 aa9.93□□□□□ -0.82
TRIM59-208ENST00000543469 FAM208AQ9UK61 1670 aaKnown RBP9.93□□□□□ -0.82
TRIM59-208ENST00000543469 COL3A1P02461 1466 aaPredicted RBP9.93□□□□□ -0.82
TRIM59-208ENST00000543469 ALDH1L1O75891 902 aa9.92□□□□□ -0.82
TRIM59-208ENST00000543469 PHACTR3Q96KR7 559 aa9.92□□□□□ -0.82
TRIM59-208ENST00000543469 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
TRIM59-208ENST00000543469 NOB1Q9ULX3 412 aaKnown RBP9.92□□□□□ -0.82
TRIM59-208ENST00000543469 TRIM35Q9UPQ4 493 aa9.92□□□□□ -0.82
TRIM59-208ENST00000543469 BRPF1P55201 1214 aaPredicted RBP9.92□□□□□ -0.82
TRIM59-208ENST00000543469 IRX6P78412 446 aaPredicted RBP9.92□□□□□ -0.82
TRIM59-208ENST00000543469 FBLN1P23142 703 aa9.92□□□□□ -0.82
TRIM59-208ENST00000543469 NRKQ7Z2Y5 1582 aa9.92□□□□□ -0.82
TRIM59-208ENST00000543469 CRBNQ96SW2 442 aa9.91□□□□□ -0.82
TRIM59-208ENST00000543469 ZNF521Q96K83 1311 aa9.91□□□□□ -0.82
TRIM59-208ENST00000543469 VSIG10Q8N0Z9 540 aa9.9□□□□□ -0.82
TRIM59-208ENST00000543469 COG6Q9Y2V7 657 aa9.9□□□□□ -0.82
TRIM59-208ENST00000543469 ZNF790Q6PG37 636 aa9.9□□□□□ -0.83
TRIM59-208ENST00000543469 TRMT2AQ8IZ69 625 aaKnown RBP9.9□□□□□ -0.83
TRIM59-208ENST00000543469 SSH1Q8WYL5 1049 aa9.9□□□□□ -0.83
TRIM59-208ENST00000543469 FAM83GA6ND36 823 aa9.89□□□□□ -0.83
TRIM59-208ENST00000543469 FAM196AQ6ZSG2 479 aa9.89□□□□□ -0.83
TRIM59-208ENST00000543469 DNAAF4Q8WXU2 420 aa9.89□□□□□ -0.83
TRIM59-208ENST00000543469 MAP2P11137 1827 aaKnown RBP9.89□□□□□ -0.83
TRIM59-208ENST00000543469 COL14A1Q05707 1796 aaKnown RBP9.89□□□□□ -0.83
TRIM59-208ENST00000543469 G3BP1Q13283 466 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRIM59-208ENST00000543469 DCTN1Q14203 1278 aa9.89□□□□□ -0.83
TRIM59-208ENST00000543469 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
TRIM59-208ENST00000543469 BCL2L13Q9BXK5 485 aa9.89□□□□□ -0.83
TRIM59-208ENST00000543469 PIK3C2AO00443 1686 aa9.89□□□□□ -0.83
TRIM59-208ENST00000543469 PHLPP1O60346 1717 aa9.89□□□□□ -0.83
TRIM59-208ENST00000543469 DDX21Q9NR30 783 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRIM59-208ENST00000543469 FLIIQ13045 1269 aa9.89□□□□□ -0.83
TRIM59-208ENST00000543469 FLAD1Q8NFF5 587 aa9.89□□□□□ -0.83
TRIM59-208ENST00000543469 STRCQ7RTU9 1775 aa9.88□□□□□ -0.83
TRIM59-208ENST00000543469 ZNF853P0CG23 659 aa9.88□□□□□ -0.83
TRIM59-208ENST00000543469 MCCP23508 829 aa9.88□□□□□ -0.83
TRIM59-208ENST00000543469 MRPL50Q8N5N7 158 aaKnown RBP9.88□□□□□ -0.83
TRIM59-208ENST00000543469 NFAT5O94916 1531 aa9.88□□□□□ -0.83
TRIM59-208ENST00000543469 VAMP4O75379 141 aa9.88□□□□□ -0.83
TRIM59-208ENST00000543469 THUMPD2Q9BTF0 503 aaKnown RBP9.88□□□□□ -0.83
TRIM59-208ENST00000543469 USP54Q70EL1 1684 aa9.88□□□□□ -0.83
TRIM59-208ENST00000543469 ZPR1O75312 459 aa9.87□□□□□ -0.83
TRIM59-208ENST00000543469 RBM6P78332 1123 aaKnown RBP9.87□□□□□ -0.83
TRIM59-208ENST00000543469 RAB11FIP3O75154 756 aa9.87□□□□□ -0.83
TRIM59-208ENST00000543469 KSR2Q6VAB6 950 aa9.87□□□□□ -0.83
TRIM59-208ENST00000543469 AK7Q96M32 723 aa9.87□□□□□ -0.83
TRIM59-208ENST00000543469 QTRT2Q9H974 415 aaKnown RBP9.87□□□□□ -0.83
TRIM59-208ENST00000543469 SPATA31A1Q5TZJ5 1347 aa9.87□□□□□ -0.83
TRIM59-208ENST00000543469 RXRBP28702 533 aa9.87□□□□□ -0.83
TRIM59-208ENST00000543469 SPATA31A5Q5VU36 1347 aa9.87□□□□□ -0.83
TRIM59-208ENST00000543469 SPATA31A7Q8IWB4 1347 aa9.87□□□□□ -0.83
TRIM59-208ENST00000543469 ERC2O15083 957 aa9.86□□□□□ -0.83
TRIM59-208ENST00000543469 PPP1R42Q7Z4L9 355 aa9.86□□□□□ -0.83
TRIM59-208ENST00000543469 NFATC2IPQ8NCF5 419 aa9.86□□□□□ -0.83
TRIM59-208ENST00000543469 EXOC6Q8TAG9 804 aa9.86□□□□□ -0.83
TRIM59-208ENST00000543469 CHMP3Q9Y3E7 222 aa9.86□□□□□ -0.83
TRIM59-208ENST00000543469 AFF2P51816 1311 aa9.86□□□□□ -0.83
TRIM59-208ENST00000543469 EIF4A1P60842 406 aaKnown RBP9.86□□□□□ -0.83
TRIM59-208ENST00000543469 AIMP1Q12904 312 aaKnown RBP9.86□□□□□ -0.83
TRIM59-208ENST00000543469 GORABQ5T7V8 394 aa9.86□□□□□ -0.83
TRIM59-208ENST00000543469 FBXO41Q8TF61 875 aa9.86□□□□□ -0.83
TRIM59-208ENST00000543469 NYXQ9GZU5 481 aa9.86□□□□□ -0.83
TRIM59-208ENST00000543469 ROBO1Q9Y6N7 1651 aa9.86□□□□□ -0.83
TRIM59-208ENST00000543469 COL5A2P05997 1499 aaPredicted RBP9.86□□□□□ -0.83
TRIM59-208ENST00000543469 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
TRIM59-208ENST00000543469 BECN1Q14457 450 aa9.85□□□□□ -0.83
TRIM59-208ENST00000543469 PARP10Q53GL7 1025 aa9.85□□□□□ -0.83
TRIM59-208ENST00000543469 NECTIN2Q92692 538 aa9.85□□□□□ -0.83
TRIM59-208ENST00000543469 BCAR3O75815 825 aa9.85□□□□□ -0.83
TRIM59-208ENST00000543469 FAM98CQ17RN3 349 aaKnown RBP9.85□□□□□ -0.83
TRIM59-208ENST00000543469 HSPA1LP34931 641 aa9.85□□□□□ -0.83
TRIM59-208ENST00000543469 IL17REQ8NFR9 667 aa9.85□□□□□ -0.83
TRIM59-208ENST00000543469 ATP6V1AP38606 617 aa9.84□□□□□ -0.83
TRIM59-208ENST00000543469 LINS1Q8NG48 757 aa9.84□□□□□ -0.83
TRIM59-208ENST00000543469 CWC25Q9NXE8 425 aaPredicted RBP9.84□□□□□ -0.83
TRIM59-208ENST00000543469 ANKRD13DQ6ZTN6 518 aa9.84□□□□□ -0.83
TRIM59-208ENST00000543469 LTBP4Q8N2S1 1624 aa9.84□□□□□ -0.83
TRIM59-208ENST00000543469 PANK1Q8TE04 598 aa9.84□□□□□ -0.83
TRIM59-208ENST00000543469 PTCD1O75127 700 aaKnown RBP9.84□□□□□ -0.83
TRIM59-208ENST00000543469 B4GALNT3Q6L9W6 998 aa9.84□□□□□ -0.83
TRIM59-208ENST00000543469 GJD4Q96KN9 370 aaPredicted RBP9.84□□□□□ -0.83
TRIM59-208ENST00000543469 NHSL1Q5SYE7 1610 aa9.84□□□□□ -0.83
TRIM59-208ENST00000543469 MSH5O43196 834 aa9.84□□□□□ -0.83
TRIM59-208ENST00000543469 NBPF14Q5TI25 921 aa9.84□□□□□ -0.83
TRIM59-208ENST00000543469 PLBD2Q8NHP8 589 aa9.84□□□□□ -0.83
TRIM59-208ENST00000543469 PLIN1O60240 522 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms