RNA–Protein interactions for RNA: ENST00000543303.6

MTHFSD-203, Transcript of methenyltetrahydrofolate synthetase domain containing, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTHFSD, Length 1,207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFSD-203ENST00000543303 SLC4A9Q96Q91 983 aa23.24■■□□□ 1.31
MTHFSD-203ENST00000543303 VIRMAQ69YN4 1812 aaKnown RBP23.24■■□□□ 1.31
MTHFSD-203ENST00000543303 SLC15A2Q16348 729 aa23.23■■□□□ 1.31
MTHFSD-203ENST00000543303 LOC102724428A0A0B4J2F2 783 aa23.22■■□□□ 1.31
MTHFSD-203ENST00000543303 SIK1P57059 783 aa23.22■■□□□ 1.31
MTHFSD-203ENST00000543303 AKT1S1Q96B36 256 aa23.22■■□□□ 1.31
MTHFSD-203ENST00000543303 PDGFDQ9GZP0 370 aaPredicted RBP23.22■■□□□ 1.31
MTHFSD-203ENST00000543303 CEMIPQ8WUJ3 1361 aa23.22■■□□□ 1.31
MTHFSD-203ENST00000543303 DCTN1Q14203 1278 aa23.21■■□□□ 1.31
MTHFSD-203ENST00000543303 CCDC146Q8IYE0 955 aa23.21■■□□□ 1.31
MTHFSD-203ENST00000543303 SLC39A6Q13433 755 aa23.2■■□□□ 1.3
MTHFSD-203ENST00000543303 ITPK1Q13572 414 aa23.2■■□□□ 1.3
MTHFSD-203ENST00000543303 WDR43Q15061 677 aaKnown RBP eCLIP23.2■■□□□ 1.3
MTHFSD-203ENST00000543303 NFE2L2Q16236 605 aa23.2■■□□□ 1.3
MTHFSD-203ENST00000543303 MCM10Q7L590 875 aa23.2■■□□□ 1.3
MTHFSD-203ENST00000543303 STK32BQ9NY57 414 aa23.2■■□□□ 1.3
MTHFSD-203ENST00000543303 PNNQ9H307 717 aaKnown RBP23.18■■□□□ 1.3
MTHFSD-203ENST00000543303 MAPK8IP3Q9UPT6 1336 aa23.17■■□□□ 1.3
MTHFSD-203ENST00000543303 LINC00116Q8NCU8 138 aa23.17■■□□□ 1.3
MTHFSD-203ENST00000543303 DLG5Q8TDM6 1919 aa23.16■■□□□ 1.3
MTHFSD-203ENST00000543303 HTATSF1O43719 755 aaKnown RBP23.16■■□□□ 1.3
MTHFSD-203ENST00000543303 PTCD1O75127 700 aaKnown RBP23.16■■□□□ 1.3
MTHFSD-203ENST00000543303 NEFMP07197 916 aa23.16■■□□□ 1.3
MTHFSD-203ENST00000543303 ATP6V1AP38606 617 aa23.16■■□□□ 1.3
MTHFSD-203ENST00000543303 PNISRQ8TF01 805 aaKnown RBP23.16■■□□□ 1.3
MTHFSD-203ENST00000543303 RBM42Q9BTD8 480 aaKnown RBP23.16■■□□□ 1.3
MTHFSD-203ENST00000543303 TAF1LQ8IZX4 1826 aa23.16■■□□□ 1.3
MTHFSD-203ENST00000543303 SIPA1L3O60292 1781 aaPredicted RBP23.15■■□□□ 1.3
MTHFSD-203ENST00000543303 C5P01031 1676 aa23.15■■□□□ 1.3
MTHFSD-203ENST00000543303 TMPOP42166 694 aaKnown RBP23.14■■□□□ 1.29
MTHFSD-203ENST00000543303 TEFQ10587 303 aa23.14■■□□□ 1.29
MTHFSD-203ENST00000543303 AMIGO3Q86WK7 504 aa23.14■■□□□ 1.29
MTHFSD-203ENST00000543303 RTF1Q92541 710 aaKnown RBP23.14■■□□□ 1.29
MTHFSD-203ENST00000543303 RUNDC1Q96C34 613 aa23.14■■□□□ 1.29
MTHFSD-203ENST00000543303 THUMPD2Q9BTF0 503 aaKnown RBP23.14■■□□□ 1.29
MTHFSD-203ENST00000543303 MRS2Q9HD23 443 aa23.14■■□□□ 1.29
MTHFSD-203ENST00000543303 RRP7AQ9Y3A4 280 aaKnown RBP23.14■■□□□ 1.29
MTHFSD-203ENST00000543303 KCNQ3O43525 872 aa23.13■■□□□ 1.29
MTHFSD-203ENST00000543303 KCPQ6ZWJ8 1503 aa23.13■■□□□ 1.29
MTHFSD-203ENST00000543303 CASZ1Q86V15 1759 aa23.12■■□□□ 1.29
MTHFSD-203ENST00000543303 RIPK4P57078 832 aa23.12■■□□□ 1.29
MTHFSD-203ENST00000543303 SMIM5Q71RC9 77 aa23.12■■□□□ 1.29
MTHFSD-203ENST00000543303 PNPLA7Q6ZV29 1317 aa23.11■■□□□ 1.29
MTHFSD-203ENST00000543303 TUBGCP6Q96RT7 1819 aa23.11■■□□□ 1.29
MTHFSD-203ENST00000543303 C4BP0C0L5 1744 aa23.11■■□□□ 1.29
MTHFSD-203ENST00000543303 ZNF831Q5JPB2 1677 aa23.1■■□□□ 1.29
MTHFSD-203ENST00000543303 TFCP2L1Q9NZI6 479 aa23.1■■□□□ 1.29
MTHFSD-203ENST00000543303 NEUROD2Q15784 382 aa23.09■■□□□ 1.29
MTHFSD-203ENST00000543303 ZNF790Q6PG37 636 aa23.09■■□□□ 1.29
MTHFSD-203ENST00000543303 BTBD11A6QL63 1104 aa23.08■■□□□ 1.29
MTHFSD-203ENST00000543303 DNAJC10Q8IXB1 793 aa23.08■■□□□ 1.29
MTHFSD-203ENST00000543303 ZNF496Q96IT1 587 aaPredicted RBP23.08■■□□□ 1.29
MTHFSD-203ENST00000543303 MIS18AQ9NYP9 233 aa23.08■■□□□ 1.29
MTHFSD-203ENST00000543303 TRIM35Q9UPQ4 493 aa23.08■■□□□ 1.29
MTHFSD-203ENST00000543303 UBR2Q8IWV8 1755 aa23.08■■□□□ 1.29
MTHFSD-203ENST00000543303 TJP1Q07157 1748 aa23.08■■□□□ 1.28
MTHFSD-203ENST00000543303 COL23A1Q86Y22 540 aaPredicted RBP23.07■■□□□ 1.28
MTHFSD-203ENST00000543303 COL5A3P25940 1745 aaPredicted RBP23.06■■□□□ 1.28
MTHFSD-203ENST00000543303 QSER1Q2KHR3 1735 aa23.06■■□□□ 1.28
MTHFSD-203ENST00000543303 APAF1O14727 1248 aa23.06■■□□□ 1.28
MTHFSD-203ENST00000543303 ZBTB7AO95365 584 aa23.06■■□□□ 1.28
MTHFSD-203ENST00000543303 TAF7Q15545 349 aaPredicted RBP23.06■■□□□ 1.28
MTHFSD-203ENST00000543303 AK7Q96M32 723 aa23.05■■□□□ 1.28
MTHFSD-203ENST00000543303 SRCAPQ6ZRS2 3230 aa23.05■■□□□ 1.28
MTHFSD-203ENST00000543303 MYH14Q7Z406 1995 aaKnown RBP23.05■■□□□ 1.28
MTHFSD-203ENST00000543303 CICQ96RK0 1608 aaPredicted RBP23.04■■□□□ 1.28
MTHFSD-203ENST00000543303 TTC5Q8N0Z6 440 aa23.04■■□□□ 1.28
MTHFSD-203ENST00000543303 UBR3Q6ZT12 1888 aa23.03■■□□□ 1.28
MTHFSD-203ENST00000543303 SENP3-EIF4A1A0A087X0R7 540 aa23.03■■□□□ 1.28
MTHFSD-203ENST00000543303 RC3H1Q5TC82 1133 aaKnown RBP23.03■■□□□ 1.28
MTHFSD-203ENST00000543303 INTS5Q6P9B9 1019 aaKnown RBP23.03■■□□□ 1.28
MTHFSD-203ENST00000543303 CNTNAP4Q9C0A0 1308 aa23.03■■□□□ 1.28
MTHFSD-203ENST00000543303 HEG1Q9ULI3 1381 aa23.02■■□□□ 1.28
MTHFSD-203ENST00000543303 GNPATO15228 680 aa23.02■■□□□ 1.28
MTHFSD-203ENST00000543303 CYP19A1P11511 503 aaPredicted RBP23.02■■□□□ 1.28
MTHFSD-203ENST00000543303 HMGB2P26583 209 aaKnown RBP23.02■■□□□ 1.28
MTHFSD-203ENST00000543303 VSIG10Q8N0Z9 540 aa23.02■■□□□ 1.28
MTHFSD-203ENST00000543303 ATF5Q9Y2D1 282 aaPredicted RBP23.02■■□□□ 1.28
MTHFSD-203ENST00000543303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.01■■□□□ 1.27
MTHFSD-203ENST00000543303 PHF14O94880 888 aa23.01■■□□□ 1.27
MTHFSD-203ENST00000543303 CRKLP46109 303 aaKnown RBP23.01■■□□□ 1.27
MTHFSD-203ENST00000543303 PRAMEF22A3QJZ6 481 aa23■■□□□ 1.27
MTHFSD-203ENST00000543303 PTGER2P43116 358 aa23■■□□□ 1.27
MTHFSD-203ENST00000543303 FMNL2Q96PY5 1086 aa23■■□□□ 1.27
MTHFSD-203ENST00000543303 LRP5O75197 1615 aa23■■□□□ 1.27
MTHFSD-203ENST00000543303 LMOD3Q0VAK6 560 aa22.99■■□□□ 1.27
MTHFSD-203ENST00000543303 MTFR1LQ9H019 292 aa22.99■■□□□ 1.27
MTHFSD-203ENST00000543303 SPON1Q9HCB6 807 aa22.99■■□□□ 1.27
MTHFSD-203ENST00000543303 RPS6KA4O75676 772 aa22.98■■□□□ 1.27
MTHFSD-203ENST00000543303 SSFA2P28290 1259 aa22.98■■□□□ 1.27
MTHFSD-203ENST00000543303 DIEXFQ68CQ4 756 aaKnown RBP22.98■■□□□ 1.27
MTHFSD-203ENST00000543303 SGIP1Q9BQI5 828 aa22.98■■□□□ 1.27
MTHFSD-203ENST00000543303 KDM3BQ7LBC6 1761 aa22.97■■□□□ 1.27
MTHFSD-203ENST00000543303 FAM9BQ8IZU0 186 aa22.97■■□□□ 1.27
MTHFSD-203ENST00000543303 SLC16A10Q8TF71 515 aa22.97■■□□□ 1.27
MTHFSD-203ENST00000543303 MSH5O43196 834 aa22.96■■□□□ 1.27
MTHFSD-203ENST00000543303 FLAD1Q8NFF5 587 aa22.96■■□□□ 1.27
MTHFSD-203ENST00000543303 CCDC87Q9NVE4 849 aa22.96■■□□□ 1.27
MTHFSD-203ENST00000543303 ZBTB1Q9Y2K1 713 aa22.96■■□□□ 1.27
MTHFSD-203ENST00000543303 RTCBQ9Y3I0 505 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms