RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 MPRIPQ6WCQ1 1025 aa25.69■■□□□ 1.7
ME3-212ENST00000543262 BMP2KLQ5H9B9 411 aa25.69■■□□□ 1.7
ME3-212ENST00000543262 KDM3BQ7LBC6 1761 aa25.68■■□□□ 1.7
ME3-212ENST00000543262 CADPS2Q86UW7 1296 aa25.68■■□□□ 1.7
ME3-212ENST00000543262 MFAP1P55081 439 aaKnown RBP25.67■■□□□ 1.7
ME3-212ENST00000543262 EIF4A1P60842 406 aaKnown RBP25.67■■□□□ 1.7
ME3-212ENST00000543262 TEFQ10587 303 aa25.67■■□□□ 1.7
ME3-212ENST00000543262 HDGFL1Q5TGJ6 251 aa25.67■■□□□ 1.7
ME3-212ENST00000543262 PXDNQ92626 1479 aa25.67■■□□□ 1.7
ME3-212ENST00000543262 C1orf141Q5JVX7 400 aa25.66■■□□□ 1.7
ME3-212ENST00000543262 ERBB3P21860 1342 aa25.65■■□□□ 1.7
ME3-212ENST00000543262 RNMTO43148 476 aaKnown RBP25.64■■□□□ 1.7
ME3-212ENST00000543262 KCNQ3O43525 872 aa25.64■■□□□ 1.7
ME3-212ENST00000543262 NPHP3Q7Z494 1330 aa25.64■■□□□ 1.7
ME3-212ENST00000543262 BTBD11A6QL63 1104 aa25.64■■□□□ 1.69
ME3-212ENST00000543262 C22orf23Q9BZE7 217 aa25.64■■□□□ 1.69
ME3-212ENST00000543262 EIF2S2P20042 333 aaKnown RBP25.62■■□□□ 1.69
ME3-212ENST00000543262 BECN1Q14457 450 aa25.62■■□□□ 1.69
ME3-212ENST00000543262 PHAXQ9H814 394 aaKnown RBP25.62■■□□□ 1.69
ME3-212ENST00000543262 PLEKHM2Q8IWE5 1019 aa25.61■■□□□ 1.69
ME3-212ENST00000543262 CABLES1Q8TDN4 633 aa25.61■■□□□ 1.69
ME3-212ENST00000543262 XIRP1Q702N8 1843 aaKnown RBP25.61■■□□□ 1.69
ME3-212ENST00000543262 GNAI2P04899 355 aa25.6■■□□□ 1.69
ME3-212ENST00000543262 HOXB7P09629 217 aa25.6■■□□□ 1.69
ME3-212ENST00000543262 N4BP2Q86UW6 1770 aaPredicted RBP25.6■■□□□ 1.69
ME3-212ENST00000543262 HMMRO75330 724 aa25.59■■□□□ 1.69
ME3-212ENST00000543262 RTL5Q5HYW3 569 aaPredicted RBP25.59■■□□□ 1.69
ME3-212ENST00000543262 C16orf71Q8IYS4 520 aaPredicted RBP25.59■■□□□ 1.69
ME3-212ENST00000543262 OVOS2A0A0G2JMS6 1433 aa25.59■■□□□ 1.69
ME3-212ENST00000543262 TNS3Q68CZ2 1445 aa25.59■■□□□ 1.69
ME3-212ENST00000543262 GNAI3P08754 354 aa25.58■■□□□ 1.69
ME3-212ENST00000543262 NLRP2Q9NX02 1062 aa25.58■■□□□ 1.69
ME3-212ENST00000543262 COL18A1P39060 1754 aa25.58■■□□□ 1.69
ME3-212ENST00000543262 APBB1O00213 710 aa25.57■■□□□ 1.68
ME3-212ENST00000543262 PXDNLA1KZ92 1463 aa25.57■■□□□ 1.68
ME3-212ENST00000543262 CHPF2Q9P2E5 772 aa25.57■■□□□ 1.68
ME3-212ENST00000543262 SMARCA5O60264 1052 aaPredicted RBP25.56■■□□□ 1.68
ME3-212ENST00000543262 CHMP4AQ9BY43 222 aa25.56■■□□□ 1.68
ME3-212ENST00000543262 SPATA31A3Q5VYP0 1347 aa25.56■■□□□ 1.68
ME3-212ENST00000543262 CRYBG1Q9Y4K1 1723 aa25.56■■□□□ 1.68
ME3-212ENST00000543262 RAPGEF4Q8WZA2 1011 aa25.55■■□□□ 1.68
ME3-212ENST00000543262 SIPA1L3O60292 1781 aaPredicted RBP25.55■■□□□ 1.68
ME3-212ENST00000543262 GSPT1P15170 499 aaKnown RBP25.54■■□□□ 1.68
ME3-212ENST00000543262 OTUD7AQ8TE49 926 aaPredicted RBP25.54■■□□□ 1.68
ME3-212ENST00000543262 STRCQ7RTU9 1775 aa25.54■■□□□ 1.68
ME3-212ENST00000543262 TBC1D9Q6ZT07 1266 aa25.54■■□□□ 1.68
ME3-212ENST00000543262 CHRNA2Q15822 529 aa25.53■■□□□ 1.68
ME3-212ENST00000543262 TBC1D2Q9BYX2 928 aa25.53■■□□□ 1.68
ME3-212ENST00000543262 USP44Q9H0E7 712 aa25.53■■□□□ 1.68
ME3-212ENST00000543262 ADAMTS7Q9UKP4 1686 aa25.53■■□□□ 1.68
ME3-212ENST00000543262 TTC22Q5TAA0 569 aa25.52■■□□□ 1.68
ME3-212ENST00000543262 USP35Q9P2H5 1018 aa25.52■■□□□ 1.68
ME3-212ENST00000543262 LMTK3Q96Q04 1460 aa25.52■■□□□ 1.68
ME3-212ENST00000543262 CSB-PGBD3P0DP91 1061 aa25.51■■□□□ 1.67
ME3-212ENST00000543262 ATP8B2P98198 1209 aa25.51■■□□□ 1.67
ME3-212ENST00000543262 BRINP3Q76B58 766 aa25.51■■□□□ 1.67
ME3-212ENST00000543262 RBM25P49756 843 aaKnown RBP25.51■■□□□ 1.67
ME3-212ENST00000543262 LRRFIP2Q9Y608 721 aaKnown RBP25.51■■□□□ 1.67
ME3-212ENST00000543262 KDM4FA0A1W2PPD8 638 aa25.5■■□□□ 1.67
ME3-212ENST00000543262 GIGYF1O75420 1035 aaPredicted RBP25.5■■□□□ 1.67
ME3-212ENST00000543262 ANXA1P04083 346 aa25.5■■□□□ 1.67
ME3-212ENST00000543262 TATP17735 454 aaPredicted RBP25.5■■□□□ 1.67
ME3-212ENST00000543262 HEG1Q9ULI3 1381 aa25.5■■□□□ 1.67
ME3-212ENST00000543262 PNMA6EA0A0J9YXQ4 647 aa25.49■■□□□ 1.67
ME3-212ENST00000543262 CDC45O75419 566 aa25.49■■□□□ 1.67
ME3-212ENST00000543262 SRCIN1Q9C0H9 1055 aa25.49■■□□□ 1.67
ME3-212ENST00000543262 UBTFL1P0CB47 393 aaPredicted RBP25.48■■□□□ 1.67
ME3-212ENST00000543262 DBF4Q9UBU7 674 aaPredicted RBP25.48■■□□□ 1.67
ME3-212ENST00000543262 EXOC6BQ9Y2D4 811 aa25.48■■□□□ 1.67
ME3-212ENST00000543262 MEGF6O75095 1541 aa25.48■■□□□ 1.67
ME3-212ENST00000543262 PI4KAP2A4QPH2 592 aa25.48■■□□□ 1.67
ME3-212ENST00000543262 NFKBIBQ15653 356 aa25.48■■□□□ 1.67
ME3-212ENST00000543262 PI4KAP1Q8N8J0 262 aa25.48■■□□□ 1.67
ME3-212ENST00000543262 SPG7Q9UQ90 795 aa25.48■■□□□ 1.67
ME3-212ENST00000543262 SCN11AQ9UI33 1791 aa25.47■■□□□ 1.67
ME3-212ENST00000543262 DNAAF4Q8WXU2 420 aa25.47■■□□□ 1.67
ME3-212ENST00000543262 ABCC6O95255 1503 aa25.46■■□□□ 1.67
ME3-212ENST00000543262 PRAMEF22A3QJZ6 481 aa25.46■■□□□ 1.67
ME3-212ENST00000543262 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.46■■□□□ 1.67
ME3-212ENST00000543262 CPDO75976 1380 aa25.46■■□□□ 1.67
ME3-212ENST00000543262 PHKG2P15735 406 aa25.46■■□□□ 1.67
ME3-212ENST00000543262 KDM6AO15550 1401 aaPredicted RBP25.45■■□□□ 1.66
ME3-212ENST00000543262 BEND3Q5T5X7 828 aa25.45■■□□□ 1.66
ME3-212ENST00000543262 ZNF335Q9H4Z2 1342 aaPredicted RBP25.45■■□□□ 1.66
ME3-212ENST00000543262 ADCY9O60503 1353 aa25.44■■□□□ 1.66
ME3-212ENST00000543262 SLKQ9H2G2 1235 aaPredicted RBP25.43■■□□□ 1.66
ME3-212ENST00000543262 SLC52A2Q9HAB3 445 aa25.43■■□□□ 1.66
ME3-212ENST00000543262 SLAIN2Q9P270 581 aa25.43■■□□□ 1.66
ME3-212ENST00000543262 PROSER3Q2NL68 480 aa25.43■■□□□ 1.66
ME3-212ENST00000543262 SDSP20132 328 aa25.42■■□□□ 1.66
ME3-212ENST00000543262 IFNL2Q8IZJ0 200 aa25.42■■□□□ 1.66
ME3-212ENST00000543262 LRRCC1Q9C099 1032 aa25.42■■□□□ 1.66
ME3-212ENST00000543262 SLC39A6Q13433 755 aa25.41■■□□□ 1.66
ME3-212ENST00000543262 NFATC2IPQ8NCF5 419 aa25.41■■□□□ 1.66
ME3-212ENST00000543262 IBTKQ9P2D0 1353 aaPredicted RBP25.41■■□□□ 1.66
ME3-212ENST00000543262 NBPF7P0C2Y1 421 aaPredicted RBP25.41■■□□□ 1.66
ME3-212ENST00000543262 ZNF790Q6PG37 636 aa25.41■■□□□ 1.66
ME3-212ENST00000543262 OSBPL3Q9H4L5 887 aa25.41■■□□□ 1.66
ME3-212ENST00000543262 ANTXR1Q9H6X2 564 aa25.41■■□□□ 1.66
ME3-212ENST00000543262 PDE1AP54750 535 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms