RNA–Protein interactions for RNA: ENST00000542953.1

NPIPB3-211, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-211ENST00000542953 ANKRD13DQ6ZTN6 518 aa7.22□□□□□ -1.25
NPIPB3-211ENST00000542953 ABTB2Q8N961 1025 aa7.22□□□□□ -1.25
NPIPB3-211ENST00000542953 TRPM1Q7Z4N2 1603 aa7.22□□□□□ -1.25
NPIPB3-211ENST00000542953 ACEP12821 1306 aa7.22□□□□□ -1.25
NPIPB3-211ENST00000542953 ZNF316A6NFI3 1004 aaPredicted RBP7.21□□□□□ -1.26
NPIPB3-211ENST00000542953 TOM1L2Q6ZVM7 507 aa7.21□□□□□ -1.26
NPIPB3-211ENST00000542953 NLRP13Q86W25 1043 aa7.21□□□□□ -1.26
NPIPB3-211ENST00000542953 KLRG1Q96E93 195 aa7.21□□□□□ -1.26
NPIPB3-211ENST00000542953 MS4A4AQ96JQ5 239 aa7.21□□□□□ -1.26
NPIPB3-211ENST00000542953 CARD10Q9BWT7 1032 aa7.21□□□□□ -1.26
NPIPB3-211ENST00000542953 TRAK1Q9UPV9 953 aa7.21□□□□□ -1.26
NPIPB3-211ENST00000542953 SLIT3O75094 1523 aa7.21□□□□□ -1.26
NPIPB3-211ENST00000542953 ABCC6O95255 1503 aa7.21□□□□□ -1.26
NPIPB3-211ENST00000542953 ARHGEF28Q8N1W1 1705 aaKnown RBP7.21□□□□□ -1.26
NPIPB3-211ENST00000542953 COL18A1P39060 1754 aa7.2□□□□□ -1.26
NPIPB3-211ENST00000542953 USP6P35125 1406 aa7.2□□□□□ -1.26
NPIPB3-211ENST00000542953 TOMM70O94826 608 aa7.2□□□□□ -1.26
NPIPB3-211ENST00000542953 LSM11P83369 360 aaKnown RBP eCLIP7.2□□□□□ -1.26
NPIPB3-211ENST00000542953 SLC27A3Q5K4L6 730 aa7.2□□□□□ -1.26
NPIPB3-211ENST00000542953 ZNF526Q8TF50 670 aaPredicted RBP7.2□□□□□ -1.26
NPIPB3-211ENST00000542953 EXOC5O00471 708 aa7.19□□□□□ -1.26
NPIPB3-211ENST00000542953 RIOK3O14730 519 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-211ENST00000542953 PBX2P40425 430 aa7.19□□□□□ -1.26
NPIPB3-211ENST00000542953 AXIN2Q9Y2T1 843 aa7.19□□□□□ -1.26
NPIPB3-211ENST00000542953 CD2APQ9Y5K6 639 aa7.19□□□□□ -1.26
NPIPB3-211ENST00000542953 CCDC7Q96M83 1385 aa7.19□□□□□ -1.26
NPIPB3-211ENST00000542953 CPSF1Q10570 1443 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-211ENST00000542953 CICQ96RK0 1608 aaPredicted RBP7.18□□□□□ -1.26
NPIPB3-211ENST00000542953 WDR90Q96KV7 1748 aa7.18□□□□□ -1.26
NPIPB3-211ENST00000542953 PPIP5K1Q6PFW1 1433 aa7.18□□□□□ -1.26
NPIPB3-211ENST00000542953 BTAF1O14981 1849 aa7.17□□□□□ -1.26
NPIPB3-211ENST00000542953 ACSBG1Q96GR2 724 aa7.17□□□□□ -1.26
NPIPB3-211ENST00000542953 TFCP2L1Q9NZI6 479 aa7.17□□□□□ -1.26
NPIPB3-211ENST00000542953 TUBGCP6Q96RT7 1819 aa7.17□□□□□ -1.26
NPIPB3-211ENST00000542953 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-211ENST00000542953 ARHGEF25Q86VW2 580 aa7.16□□□□□ -1.26
NPIPB3-211ENST00000542953 RBM46Q8TBY0 533 aaKnown RBP7.16□□□□□ -1.26
NPIPB3-211ENST00000542953 ZFP91Q96JP5 570 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-211ENST00000542953 CDK19Q9BWU1 502 aa7.16□□□□□ -1.26
NPIPB3-211ENST00000542953 NLRP6P59044 892 aa7.15□□□□□ -1.26
NPIPB3-211ENST00000542953 WWC3Q9ULE0 1092 aa7.15□□□□□ -1.26
NPIPB3-211ENST00000542953 HTRA3P83110 453 aa7.14□□□□□ -1.27
NPIPB3-211ENST00000542953 FSTL1Q12841 308 aa7.14□□□□□ -1.27
NPIPB3-211ENST00000542953 MPHOSPH9Q99550 1183 aa7.14□□□□□ -1.27
NPIPB3-211ENST00000542953 HCSTQ9UBK5 93 aa7.14□□□□□ -1.27
NPIPB3-211ENST00000542953 PIK3C2AO00443 1686 aa7.13□□□□□ -1.27
NPIPB3-211ENST00000542953 IGSF1Q8N6C5 1336 aa7.13□□□□□ -1.27
NPIPB3-211ENST00000542953 ZBTB7CA1YPR0 619 aa7.13□□□□□ -1.27
NPIPB3-211ENST00000542953 CSB-PGBD3P0DP91 1061 aa7.13□□□□□ -1.27
NPIPB3-211ENST00000542953 COL23A1Q86Y22 540 aaPredicted RBP7.13□□□□□ -1.27
NPIPB3-211ENST00000542953 PPARGC1BQ86YN6 1023 aaKnown RBP7.13□□□□□ -1.27
NPIPB3-211ENST00000542953 KHSRPQ92945 711 aaKnown RBP eCLIP7.13□□□□□ -1.27
NPIPB3-211ENST00000542953 RNF25Q96BH1 459 aaPredicted RBP7.13□□□□□ -1.27
NPIPB3-211ENST00000542953 NFAT5O94916 1531 aa7.12□□□□□ -1.27
NPIPB3-211ENST00000542953 C10orf71Q711Q0 1435 aa7.12□□□□□ -1.27
NPIPB3-211ENST00000542953 NSD2O96028 1365 aa7.12□□□□□ -1.27
NPIPB3-211ENST00000542953 IL2RBP14784 551 aa7.12□□□□□ -1.27
NPIPB3-211ENST00000542953 MSL1Q68DK7 614 aa7.12□□□□□ -1.27
NPIPB3-211ENST00000542953 KCNH5Q8NCM2 988 aa7.12□□□□□ -1.27
NPIPB3-211ENST00000542953 STAC3Q96MF2 364 aa7.12□□□□□ -1.27
NPIPB3-211ENST00000542953 NMRK2Q9NPI5 230 aa7.12□□□□□ -1.27
NPIPB3-211ENST00000542953 PLA2G2EQ9NZK7 142 aa7.12□□□□□ -1.27
NPIPB3-211ENST00000542953 TAOK2Q9UL54 1235 aa7.12□□□□□ -1.27
NPIPB3-211ENST00000542953 LY75O60449 1722 aa7.11□□□□□ -1.27
NPIPB3-211ENST00000542953 HSPA1AP0DMV8 641 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-211ENST00000542953 HSPA1BP0DMV9 641 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-211ENST00000542953 KCNQ4P56696 695 aa7.11□□□□□ -1.27
NPIPB3-211ENST00000542953 FBXO22Q8NEZ5 403 aa7.11□□□□□ -1.27
NPIPB3-211ENST00000542953 ANKRD36BQ8N2N9 1353 aa7.1□□□□□ -1.27
NPIPB3-211ENST00000542953 NUDT7P0C024 238 aa7.1□□□□□ -1.27
NPIPB3-211ENST00000542953 FLAD1Q8NFF5 587 aa7.1□□□□□ -1.27
NPIPB3-211ENST00000542953 CCNL1Q9UK58 526 aaPredicted RBP7.09□□□□□ -1.27
NPIPB3-211ENST00000542953 RGPD5Q99666 1765 aa7.09□□□□□ -1.27
NPIPB3-211ENST00000542953 QRICH2Q9H0J4 1663 aa7.09□□□□□ -1.27
NPIPB3-211ENST00000542953 PLEKHG2Q9H7P9 1386 aa7.08□□□□□ -1.28
NPIPB3-211ENST00000542953 PRIM1P49642 420 aaKnown RBP7.08□□□□□ -1.28
NPIPB3-211ENST00000542953 C16orf71Q8IYS4 520 aaPredicted RBP7.08□□□□□ -1.28
NPIPB3-211ENST00000542953 LHX6Q9UPM6 363 aa7.08□□□□□ -1.28
NPIPB3-211ENST00000542953 PXDNLA1KZ92 1463 aa7.08□□□□□ -1.28
NPIPB3-211ENST00000542953 TTC21BQ7Z4L5 1316 aa7.07□□□□□ -1.28
NPIPB3-211ENST00000542953 USP54Q70EL1 1684 aa7.07□□□□□ -1.28
NPIPB3-211ENST00000542953 C2orf72A6NCS6 295 aa7.07□□□□□ -1.28
NPIPB3-211ENST00000542953 HMGB2P26583 209 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-211ENST00000542953 SRPK2P78362 688 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-211ENST00000542953 POTEEQ6S8J3 1075 aa7.07□□□□□ -1.28
NPIPB3-211ENST00000542953 NLRP2Q9NX02 1062 aa7.07□□□□□ -1.28
NPIPB3-211ENST00000542953 CABP1Q9NZU7 370 aa7.07□□□□□ -1.28
NPIPB3-211ENST00000542953 TTC21AQ8NDW8 1320 aa7.06□□□□□ -1.28
NPIPB3-211ENST00000542953 ARHGAP33O14559 1287 aa7.06□□□□□ -1.28
NPIPB3-211ENST00000542953 SMC1BQ8NDV3 1235 aa7.06□□□□□ -1.28
NPIPB3-211ENST00000542953 PRDM10Q9NQV6 1147 aa7.06□□□□□ -1.28
NPIPB3-211ENST00000542953 PCDHGA4Q9Y5G9 962 aa7.06□□□□□ -1.28
NPIPB3-211ENST00000542953 USP47Q96K76 1375 aa7.06□□□□□ -1.28
NPIPB3-211ENST00000542953 DOT1LQ8TEK3 1739 aa7.05□□□□□ -1.28
NPIPB3-211ENST00000542953 KIAA1551Q9HCM1 1747 aa7.05□□□□□ -1.28
NPIPB3-211ENST00000542953 FAM161AQ3B820 660 aa7.05□□□□□ -1.28
NPIPB3-211ENST00000542953 ADGRD1Q6QNK2 874 aa7.05□□□□□ -1.28
NPIPB3-211ENST00000542953 DDX54Q8TDD1 881 aaKnown RBP7.05□□□□□ -1.28
NPIPB3-211ENST00000542953 DCAF11Q8TEB1 546 aa7.05□□□□□ -1.28
NPIPB3-211ENST00000542953 SYTL4Q96C24 671 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms