RNA–Protein interactions for RNA: ENST00000542933.5

LINC01089-209, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 1,220 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-209ENST00000542933 ASAP1Q9ULH1 1129 aa20.5■□□□□ 0.87
LINC01089-209ENST00000542933 HMGB2P26583 209 aaKnown RBP20.49■□□□□ 0.87
LINC01089-209ENST00000542933 R3HDM1Q15032 1099 aaKnown RBP20.49■□□□□ 0.87
LINC01089-209ENST00000542933 NFATC2IPQ8NCF5 419 aa20.49■□□□□ 0.87
LINC01089-209ENST00000542933 ATG3Q9NT62 314 aa20.49■□□□□ 0.87
LINC01089-209ENST00000542933 CEMIPQ8WUJ3 1361 aa20.48■□□□□ 0.87
LINC01089-209ENST00000542933 SRCAPQ6ZRS2 3230 aa20.48■□□□□ 0.87
LINC01089-209ENST00000542933 PSDA5PKW4 1024 aaPredicted RBP20.48■□□□□ 0.87
LINC01089-209ENST00000542933 STK32BQ9NY57 414 aa20.48■□□□□ 0.87
LINC01089-209ENST00000542933 QSER1Q2KHR3 1735 aa20.47■□□□□ 0.87
LINC01089-209ENST00000542933 LOC102724428A0A0B4J2F2 783 aa20.46■□□□□ 0.87
LINC01089-209ENST00000542933 HTATSF1O43719 755 aaKnown RBP20.46■□□□□ 0.87
LINC01089-209ENST00000542933 SIK1P57059 783 aa20.46■□□□□ 0.87
LINC01089-209ENST00000542933 IL17REQ8NFR9 667 aa20.46■□□□□ 0.87
LINC01089-209ENST00000542933 RTF1Q92541 710 aaKnown RBP20.46■□□□□ 0.87
LINC01089-209ENST00000542933 CICQ96RK0 1608 aaPredicted RBP20.45■□□□□ 0.87
LINC01089-209ENST00000542933 KCNQ4P56696 695 aa20.45■□□□□ 0.86
LINC01089-209ENST00000542933 TEFQ10587 303 aa20.45■□□□□ 0.86
LINC01089-209ENST00000542933 NFE2L2Q16236 605 aa20.45■□□□□ 0.86
LINC01089-209ENST00000542933 SLC15A2Q16348 729 aa20.45■□□□□ 0.86
LINC01089-209ENST00000542933 DIEXFQ68CQ4 756 aaKnown RBP20.45■□□□□ 0.86
LINC01089-209ENST00000542933 TUBGCP6Q96RT7 1819 aa20.45■□□□□ 0.86
LINC01089-209ENST00000542933 C4BP0C0L5 1744 aa20.44■□□□□ 0.86
LINC01089-209ENST00000542933 CASZ1Q86V15 1759 aa20.44■□□□□ 0.86
LINC01089-209ENST00000542933 UBR2Q8IWV8 1755 aa20.44■□□□□ 0.86
LINC01089-209ENST00000542933 ADAMTS8Q9UP79 889 aa20.44■□□□□ 0.86
LINC01089-209ENST00000542933 ZNF827Q17R98 1081 aa20.43■□□□□ 0.86
LINC01089-209ENST00000542933 AKT1S1Q96B36 256 aa20.43■□□□□ 0.86
LINC01089-209ENST00000542933 COL5A3P25940 1745 aaPredicted RBP20.43■□□□□ 0.86
LINC01089-209ENST00000542933 CCDC184Q52MB2 194 aa20.42■□□□□ 0.86
LINC01089-209ENST00000542933 RUNDC1Q96C34 613 aa20.42■□□□□ 0.86
LINC01089-209ENST00000542933 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
LINC01089-209ENST00000542933 MCM10Q7L590 875 aa20.41■□□□□ 0.86
LINC01089-209ENST00000542933 RBM42Q9BTD8 480 aaKnown RBP20.41■□□□□ 0.86
LINC01089-209ENST00000542933 KCPQ6ZWJ8 1503 aa20.41■□□□□ 0.86
LINC01089-209ENST00000542933 ATP6V1AP38606 617 aa20.4■□□□□ 0.86
LINC01089-209ENST00000542933 TJP1Q07157 1748 aa20.4■□□□□ 0.86
LINC01089-209ENST00000542933 CCDC146Q8IYE0 955 aa20.4■□□□□ 0.86
LINC01089-209ENST00000542933 LRP5O75197 1615 aa20.39■□□□□ 0.86
LINC01089-209ENST00000542933 PTCD1O75127 700 aaKnown RBP20.39■□□□□ 0.85
LINC01089-209ENST00000542933 TMPOP42166 694 aaKnown RBP20.38■□□□□ 0.85
LINC01089-209ENST00000542933 SLC39A6Q13433 755 aa20.38■□□□□ 0.85
LINC01089-209ENST00000542933 ITPK1Q13572 414 aa20.38■□□□□ 0.85
LINC01089-209ENST00000542933 DCTN1Q14203 1278 aa20.38■□□□□ 0.85
LINC01089-209ENST00000542933 TTC5Q8N0Z6 440 aa20.38■□□□□ 0.85
LINC01089-209ENST00000542933 SLC4A9Q96Q91 983 aa20.38■□□□□ 0.85
LINC01089-209ENST00000542933 UBR3Q6ZT12 1888 aa20.38■□□□□ 0.85
LINC01089-209ENST00000542933 RIPK4P57078 832 aa20.37■□□□□ 0.85
LINC01089-209ENST00000542933 LMOD3Q0VAK6 560 aa20.37■□□□□ 0.85
LINC01089-209ENST00000542933 LINC00116Q8NCU8 138 aa20.37■□□□□ 0.85
LINC01089-209ENST00000542933 TFCP2L1Q9NZI6 479 aa20.37■□□□□ 0.85
LINC01089-209ENST00000542933 ZNF790Q6PG37 636 aa20.36■□□□□ 0.85
LINC01089-209ENST00000542933 PNISRQ8TF01 805 aaKnown RBP20.36■□□□□ 0.85
LINC01089-209ENST00000542933 AK7Q96M32 723 aa20.36■□□□□ 0.85
LINC01089-209ENST00000542933 BTBD11A6QL63 1104 aa20.35■□□□□ 0.85
LINC01089-209ENST00000542933 KDM3BQ7LBC6 1761 aa20.34■□□□□ 0.85
LINC01089-209ENST00000542933 PNPLA7Q6ZV29 1317 aa20.34■□□□□ 0.85
LINC01089-209ENST00000542933 CNTNAP4Q9C0A0 1308 aa20.33■□□□□ 0.85
LINC01089-209ENST00000542933 VSIG10Q8N0Z9 540 aa20.33■□□□□ 0.85
LINC01089-209ENST00000542933 RRP7AQ9Y3A4 280 aaKnown RBP20.33■□□□□ 0.85
LINC01089-209ENST00000542933 MYH14Q7Z406 1995 aaKnown RBP20.33■□□□□ 0.84
LINC01089-209ENST00000542933 TAF7Q15545 349 aaPredicted RBP20.32■□□□□ 0.84
LINC01089-209ENST00000542933 PDGFDQ9GZP0 370 aaPredicted RBP20.32■□□□□ 0.84
LINC01089-209ENST00000542933 NEUROD2Q15784 382 aa20.31■□□□□ 0.84
LINC01089-209ENST00000542933 RC3H1Q5TC82 1133 aaKnown RBP20.31■□□□□ 0.84
LINC01089-209ENST00000542933 FLAD1Q8NFF5 587 aa20.31■□□□□ 0.84
LINC01089-209ENST00000542933 ZNF496Q96IT1 587 aaPredicted RBP20.31■□□□□ 0.84
LINC01089-209ENST00000542933 THUMPD2Q9BTF0 503 aaKnown RBP20.31■□□□□ 0.84
LINC01089-209ENST00000542933 HEG1Q9ULI3 1381 aa20.31■□□□□ 0.84
LINC01089-209ENST00000542933 SSFA2P28290 1259 aa20.3■□□□□ 0.84
LINC01089-209ENST00000542933 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
LINC01089-209ENST00000542933 APAF1O14727 1248 aa20.29■□□□□ 0.84
LINC01089-209ENST00000542933 GNPATO15228 680 aa20.29■□□□□ 0.84
LINC01089-209ENST00000542933 DNAJC10Q8IXB1 793 aa20.29■□□□□ 0.84
LINC01089-209ENST00000542933 SLC16A10Q8TF71 515 aa20.29■□□□□ 0.84
LINC01089-209ENST00000542933 MTFR1LQ9H019 292 aa20.29■□□□□ 0.84
LINC01089-209ENST00000542933 SPON1Q9HCB6 807 aa20.29■□□□□ 0.84
LINC01089-209ENST00000542933 COL24A1Q17RW2 1714 aa20.28■□□□□ 0.84
LINC01089-209ENST00000542933 CRKLP46109 303 aaKnown RBP20.28■□□□□ 0.84
LINC01089-209ENST00000542933 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
LINC01089-209ENST00000542933 KCNQ3O43525 872 aa20.27■□□□□ 0.84
LINC01089-209ENST00000542933 ZBTB7AO95365 584 aa20.27■□□□□ 0.84
LINC01089-209ENST00000542933 AMIGO3Q86WK7 504 aa20.27■□□□□ 0.84
LINC01089-209ENST00000542933 COL23A1Q86Y22 540 aaPredicted RBP20.27■□□□□ 0.84
LINC01089-209ENST00000542933 RTCBQ9Y3I0 505 aaKnown RBP20.27■□□□□ 0.84
LINC01089-209ENST00000542933 LAMB4A4D0S4 1761 aa20.26■□□□□ 0.83
LINC01089-209ENST00000542933 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.26■□□□□ 0.83
LINC01089-209ENST00000542933 PHF14O94880 888 aa20.26■□□□□ 0.83
LINC01089-209ENST00000542933 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
LINC01089-209ENST00000542933 C4AP0C0L4 1744 aa20.26■□□□□ 0.83
LINC01089-209ENST00000542933 MSH5O43196 834 aa20.25■□□□□ 0.83
LINC01089-209ENST00000542933 RPS6KA4O75676 772 aa20.25■□□□□ 0.83
LINC01089-209ENST00000542933 CYP19A1P11511 503 aaPredicted RBP20.25■□□□□ 0.83
LINC01089-209ENST00000542933 ADRA2BP18089 450 aa20.25■□□□□ 0.83
LINC01089-209ENST00000542933 CCDC87Q9NVE4 849 aa20.25■□□□□ 0.83
LINC01089-209ENST00000542933 BABAM1Q9NWV8 329 aa20.25■□□□□ 0.83
LINC01089-209ENST00000542933 STARD3NLO95772 234 aa20.24■□□□□ 0.83
LINC01089-209ENST00000542933 MIS18AQ9NYP9 233 aa20.24■□□□□ 0.83
LINC01089-209ENST00000542933 CCER2I3L3R5 266 aa20.23■□□□□ 0.83
LINC01089-209ENST00000542933 FAM9BQ8IZU0 186 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms