RNA–Protein interactions for RNA: ENST00000542675.1

PDE3A-202, Transcript of phosphodiesterase 3A, humanhuman

TSL 3

Gene PDE3A, Length 685 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-202ENST00000542675 GRIN3BO60391 1043 aa16.67■□□□□ 0.26
PDE3A-202ENST00000542675 MPRIPQ6WCQ1 1025 aa16.66■□□□□ 0.26
PDE3A-202ENST00000542675 PKD1L3Q7Z443 1732 aa16.66■□□□□ 0.26
PDE3A-202ENST00000542675 RAPGEF4Q8WZA2 1011 aa16.66■□□□□ 0.26
PDE3A-202ENST00000542675 PALLDQ8WX93 1383 aa16.65■□□□□ 0.26
PDE3A-202ENST00000542675 CYP27B1O15528 508 aa16.65■□□□□ 0.26
PDE3A-202ENST00000542675 TATP17735 454 aaPredicted RBP16.65■□□□□ 0.26
PDE3A-202ENST00000542675 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
PDE3A-202ENST00000542675 MIER1Q8N108 512 aa16.63■□□□□ 0.25
PDE3A-202ENST00000542675 PHF14O94880 888 aa16.62■□□□□ 0.25
PDE3A-202ENST00000542675 IFFO2Q5TF58 517 aa16.62■□□□□ 0.25
PDE3A-202ENST00000542675 CD2APQ9Y5K6 639 aa16.62■□□□□ 0.25
PDE3A-202ENST00000542675 CGNL1Q0VF96 1302 aa16.62■□□□□ 0.25
PDE3A-202ENST00000542675 PCDH11XQ9BZA7 1347 aa16.62■□□□□ 0.25
PDE3A-202ENST00000542675 PCDH11YQ9BZA8 1340 aa16.62■□□□□ 0.25
PDE3A-202ENST00000542675 ADCY9O60503 1353 aa16.62■□□□□ 0.25
PDE3A-202ENST00000542675 INSRP06213 1382 aa16.62■□□□□ 0.25
PDE3A-202ENST00000542675 SMG6Q86US8 1419 aaKnown RBP16.62■□□□□ 0.25
PDE3A-202ENST00000542675 N4BP2Q86UW6 1770 aaPredicted RBP16.61■□□□□ 0.25
PDE3A-202ENST00000542675 PIGBQ92521 554 aa16.6■□□□□ 0.25
PDE3A-202ENST00000542675 EMILIN1Q9Y6C2 1016 aa16.6■□□□□ 0.25
PDE3A-202ENST00000542675 AK7Q96M32 723 aa16.59■□□□□ 0.25
PDE3A-202ENST00000542675 GPBP1L1Q9HC44 474 aaPredicted RBP16.59■□□□□ 0.25
PDE3A-202ENST00000542675 IGSF1Q8N6C5 1336 aa16.59■□□□□ 0.25
PDE3A-202ENST00000542675 FLT4P35916 1363 aa16.59■□□□□ 0.25
PDE3A-202ENST00000542675 KIAA1551Q9HCM1 1747 aa16.59■□□□□ 0.25
PDE3A-202ENST00000542675 LINC00116Q8NCU8 138 aa16.58■□□□□ 0.24
PDE3A-202ENST00000542675 FLAD1Q8NFF5 587 aa16.58■□□□□ 0.24
PDE3A-202ENST00000542675 ANKRD26Q9UPS8 1709 aa16.58■□□□□ 0.24
PDE3A-202ENST00000542675 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.57■□□□□ 0.24
PDE3A-202ENST00000542675 CARD14Q9BXL6 1004 aa16.57■□□□□ 0.24
PDE3A-202ENST00000542675 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
PDE3A-202ENST00000542675 ITPK1Q13572 414 aa16.56■□□□□ 0.24
PDE3A-202ENST00000542675 TMF1P82094 1093 aa16.55■□□□□ 0.24
PDE3A-202ENST00000542675 PLCD3Q8N3E9 789 aa16.55■□□□□ 0.24
PDE3A-202ENST00000542675 SMARCC1Q92922 1105 aaPredicted RBP16.55■□□□□ 0.24
PDE3A-202ENST00000542675 ASAP1Q9ULH1 1129 aa16.55■□□□□ 0.24
PDE3A-202ENST00000542675 NCAPD2Q15021 1401 aa16.54■□□□□ 0.24
PDE3A-202ENST00000542675 LOC102724428A0A0B4J2F2 783 aa16.54■□□□□ 0.24
PDE3A-202ENST00000542675 PPM1GO15355 546 aaPredicted RBP16.54■□□□□ 0.24
PDE3A-202ENST00000542675 HSPA6P17066 643 aa16.54■□□□□ 0.24
PDE3A-202ENST00000542675 SIK1P57059 783 aa16.54■□□□□ 0.24
PDE3A-202ENST00000542675 MYH14Q7Z406 1995 aaKnown RBP16.54■□□□□ 0.24
PDE3A-202ENST00000542675 NKX1-1Q15270 411 aaPredicted RBP16.53■□□□□ 0.24
PDE3A-202ENST00000542675 NSD3Q9BZ95 1437 aa16.53■□□□□ 0.24
PDE3A-202ENST00000542675 BRCA1P38398 1863 aaKnown RBP16.52■□□□□ 0.24
PDE3A-202ENST00000542675 GABBR2O75899 941 aa16.52■□□□□ 0.24
PDE3A-202ENST00000542675 EYA1Q99502 592 aa16.52■□□□□ 0.24
PDE3A-202ENST00000542675 KIF24Q5T7B8 1368 aa16.51■□□□□ 0.23
PDE3A-202ENST00000542675 KIF3CO14782 793 aa16.51■□□□□ 0.23
PDE3A-202ENST00000542675 GNPATO15228 680 aa16.51■□□□□ 0.23
PDE3A-202ENST00000542675 SSFA2P28290 1259 aa16.51■□□□□ 0.23
PDE3A-202ENST00000542675 CICQ96RK0 1608 aaPredicted RBP16.51■□□□□ 0.23
PDE3A-202ENST00000542675 COL5A3P25940 1745 aaPredicted RBP16.5■□□□□ 0.23
PDE3A-202ENST00000542675 ATP6V1AP38606 617 aa16.5■□□□□ 0.23
PDE3A-202ENST00000542675 TMOD3Q9NYL9 352 aa16.5■□□□□ 0.23
PDE3A-202ENST00000542675 FBXO3Q9UK99 471 aa16.5■□□□□ 0.23
PDE3A-202ENST00000542675 PXDNLA1KZ92 1463 aa16.49■□□□□ 0.23
PDE3A-202ENST00000542675 SLC24A1O60721 1099 aa16.49■□□□□ 0.23
PDE3A-202ENST00000542675 MMP10P09238 476 aa16.49■□□□□ 0.23
PDE3A-202ENST00000542675 C4AP0C0L4 1744 aa16.49■□□□□ 0.23
PDE3A-202ENST00000542675 ATG3Q9NT62 314 aa16.49■□□□□ 0.23
PDE3A-202ENST00000542675 SPG7Q9UQ90 795 aa16.49■□□□□ 0.23
PDE3A-202ENST00000542675 PHKG2P15735 406 aa16.48■□□□□ 0.23
PDE3A-202ENST00000542675 SLC4A9Q96Q91 983 aa16.48■□□□□ 0.23
PDE3A-202ENST00000542675 WASHC2AQ641Q2 1341 aa16.47■□□□□ 0.23
PDE3A-202ENST00000542675 A0A0G2JLW4 131 aa16.47■□□□□ 0.23
PDE3A-202ENST00000542675 ZNF579Q8NAF0 562 aaKnown RBP16.46■□□□□ 0.23
PDE3A-202ENST00000542675 ARFGEF1Q9Y6D6 1849 aa16.45■□□□□ 0.22
PDE3A-202ENST00000542675 HMGB2P26583 209 aaKnown RBP16.45■□□□□ 0.22
PDE3A-202ENST00000542675 IFNL2Q8IZJ0 200 aa16.45■□□□□ 0.22
PDE3A-202ENST00000542675 POLKQ9UBT6 870 aa16.45■□□□□ 0.22
PDE3A-202ENST00000542675 BCS1LQ9Y276 419 aa16.45■□□□□ 0.22
PDE3A-202ENST00000542675 KDRP35968 1356 aa16.45■□□□□ 0.22
PDE3A-202ENST00000542675 ZNF831Q5JPB2 1677 aa16.44■□□□□ 0.22
PDE3A-202ENST00000542675 TNNT2P45379 298 aaPredicted RBP16.44■□□□□ 0.22
PDE3A-202ENST00000542675 SBF1O95248 1867 aa16.44■□□□□ 0.22
PDE3A-202ENST00000542675 DPEP1P16444 411 aa16.43■□□□□ 0.22
PDE3A-202ENST00000542675 VASPP50552 380 aaPredicted RBP16.43■□□□□ 0.22
PDE3A-202ENST00000542675 EIF4A2Q14240 407 aaKnown RBP16.43■□□□□ 0.22
PDE3A-202ENST00000542675 PHF12Q96QT6 1004 aa16.43■□□□□ 0.22
PDE3A-202ENST00000542675 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.22
PDE3A-202ENST00000542675 C10orf71Q711Q0 1435 aa16.43■□□□□ 0.22
PDE3A-202ENST00000542675 CDCA8Q53HL2 280 aa16.42■□□□□ 0.22
PDE3A-202ENST00000542675 TRAPPC3LQ5T215 181 aa16.42■□□□□ 0.22
PDE3A-202ENST00000542675 ARHGEF1Q92888 912 aaKnown RBP16.42■□□□□ 0.22
PDE3A-202ENST00000542675 NMRK2Q9NPI5 230 aa16.42■□□□□ 0.22
PDE3A-202ENST00000542675 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
PDE3A-202ENST00000542675 WDR90Q96KV7 1748 aa16.42■□□□□ 0.22
PDE3A-202ENST00000542675 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
PDE3A-202ENST00000542675 RASEFQ8IZ41 740 aa16.41■□□□□ 0.22
PDE3A-202ENST00000542675 RTCBQ9Y3I0 505 aaKnown RBP16.41■□□□□ 0.22
PDE3A-202ENST00000542675 GYS1P13807 737 aa16.4■□□□□ 0.22
PDE3A-202ENST00000542675 TSPYL2Q9H2G4 693 aaPredicted RBP16.4■□□□□ 0.22
PDE3A-202ENST00000542675 CCDC88AQ3V6T2 1871 aa16.39■□□□□ 0.22
PDE3A-202ENST00000542675 TJP1Q07157 1748 aa16.39■□□□□ 0.21
PDE3A-202ENST00000542675 KDM6AO15550 1401 aaPredicted RBP16.39■□□□□ 0.21
PDE3A-202ENST00000542675 TGFB2P61812 414 aa16.39■□□□□ 0.21
PDE3A-202ENST00000542675 DNAJC5GQ8N7S2 189 aa16.39■□□□□ 0.21
PDE3A-202ENST00000542675 POLR3GLQ9BT43 218 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms