RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 ITPK1Q13572 414 aa12.37□□□□□ -0.43
UBC-211ENST00000542416 ATG3Q9NT62 314 aa12.37□□□□□ -0.43
UBC-211ENST00000542416 CCDC87Q9NVE4 849 aa12.37□□□□□ -0.43
UBC-211ENST00000542416 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
UBC-211ENST00000542416 SMIM5Q71RC9 77 aa12.36□□□□□ -0.43
UBC-211ENST00000542416 DCAF5Q96JK2 942 aa12.36□□□□□ -0.43
UBC-211ENST00000542416 RFC4P35249 363 aa12.35□□□□□ -0.43
UBC-211ENST00000542416 ARHGAP27Q6ZUM4 889 aa12.35□□□□□ -0.43
UBC-211ENST00000542416 POLKQ9UBT6 870 aa12.35□□□□□ -0.43
UBC-211ENST00000542416 PARP3Q9Y6F1 533 aa12.35□□□□□ -0.43
UBC-211ENST00000542416 RGPD2P0DJD1 1756 aa12.34□□□□□ -0.43
UBC-211ENST00000542416 A0A0G2JLW4 131 aa12.34□□□□□ -0.43
UBC-211ENST00000542416 RPS6KA4O75676 772 aa12.34□□□□□ -0.43
UBC-211ENST00000542416 FCHSD2O94868 740 aa12.34□□□□□ -0.43
UBC-211ENST00000542416 PLEKHO1Q53GL0 409 aaPredicted RBP12.34□□□□□ -0.43
UBC-211ENST00000542416 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
UBC-211ENST00000542416 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
UBC-211ENST00000542416 CNTNAP4Q9C0A0 1308 aa12.34□□□□□ -0.43
UBC-211ENST00000542416 AMOTQ4VCS5 1084 aa12.33□□□□□ -0.44
UBC-211ENST00000542416 C16orf71Q8IYS4 520 aaPredicted RBP12.33□□□□□ -0.44
UBC-211ENST00000542416 PXDNLA1KZ92 1463 aa12.33□□□□□ -0.44
UBC-211ENST00000542416 GYS1P13807 737 aa12.32□□□□□ -0.44
UBC-211ENST00000542416 DPEP1P16444 411 aa12.32□□□□□ -0.44
UBC-211ENST00000542416 CABP4P57796 275 aa12.32□□□□□ -0.44
UBC-211ENST00000542416 EIF4A2Q14240 407 aaKnown RBP12.32□□□□□ -0.44
UBC-211ENST00000542416 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
UBC-211ENST00000542416 PIM2Q9P1W9 311 aa12.32□□□□□ -0.44
UBC-211ENST00000542416 TIMELESSQ9UNS1 1208 aa12.32□□□□□ -0.44
UBC-211ENST00000542416 C10orf71Q711Q0 1435 aa12.31□□□□□ -0.44
UBC-211ENST00000542416 FSTL1Q12841 308 aa12.31□□□□□ -0.44
UBC-211ENST00000542416 DNAJC5GQ8N7S2 189 aa12.31□□□□□ -0.44
UBC-211ENST00000542416 TAF1LQ8IZX4 1826 aa12.31□□□□□ -0.44
UBC-211ENST00000542416 PKD1L3Q7Z443 1732 aa12.31□□□□□ -0.44
UBC-211ENST00000542416 KDRP35968 1356 aa12.3□□□□□ -0.44
UBC-211ENST00000542416 CICQ96RK0 1608 aaPredicted RBP12.3□□□□□ -0.44
UBC-211ENST00000542416 DALRD3Q5D0E6 543 aaKnown RBP12.3□□□□□ -0.44
UBC-211ENST00000542416 C1orf141Q5JVX7 400 aa12.3□□□□□ -0.44
UBC-211ENST00000542416 C9orf131Q5VYM1 1079 aa12.3□□□□□ -0.44
UBC-211ENST00000542416 KDM2BQ8NHM5 1336 aa12.3□□□□□ -0.44
UBC-211ENST00000542416 UBR3Q6ZT12 1888 aa12.29□□□□□ -0.44
UBC-211ENST00000542416 MTHFSP49914 203 aa12.29□□□□□ -0.44
UBC-211ENST00000542416 ZNF530Q6P9A1 599 aaPredicted RBP12.29□□□□□ -0.44
UBC-211ENST00000542416 SLC4A9Q96Q91 983 aa12.29□□□□□ -0.44
UBC-211ENST00000542416 NMRK2Q9NPI5 230 aa12.29□□□□□ -0.44
UBC-211ENST00000542416 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
UBC-211ENST00000542416 KCNA3P22001 575 aa12.27□□□□□ -0.45
UBC-211ENST00000542416 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.45
UBC-211ENST00000542416 CRKLP46109 303 aaKnown RBP12.27□□□□□ -0.45
UBC-211ENST00000542416 MAP2P11137 1827 aaKnown RBP12.27□□□□□ -0.45
UBC-211ENST00000542416 ITGB4P16144 1822 aa12.26□□□□□ -0.45
UBC-211ENST00000542416 KIF20BQ96Q89 1820 aa12.26□□□□□ -0.45
UBC-211ENST00000542416 PTCD1O75127 700 aaKnown RBP12.26□□□□□ -0.45
UBC-211ENST00000542416 KLRG1Q96E93 195 aa12.26□□□□□ -0.45
UBC-211ENST00000542416 USP42Q9H9J4 1324 aaKnown RBP12.26□□□□□ -0.45
UBC-211ENST00000542416 ZC3H4Q9UPT8 1303 aaKnown RBP12.26□□□□□ -0.45
UBC-211ENST00000542416 ZPR1O75312 459 aa12.25□□□□□ -0.45
UBC-211ENST00000542416 NFATC2IPQ8NCF5 419 aa12.25□□□□□ -0.45
UBC-211ENST00000542416 RNF181Q9P0P0 153 aa12.25□□□□□ -0.45
UBC-211ENST00000542416 FKBP8Q14318 412 aa12.24□□□□□ -0.45
UBC-211ENST00000542416 JMYQ8N9B5 988 aa12.24□□□□□ -0.45
UBC-211ENST00000542416 SMC1BQ8NDV3 1235 aa12.24□□□□□ -0.45
UBC-211ENST00000542416 POLR3GLQ9BT43 218 aa12.24□□□□□ -0.45
UBC-211ENST00000542416 SRP68Q9UHB9 627 aaKnown RBP12.23□□□□□ -0.45
UBC-211ENST00000542416 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
UBC-211ENST00000542416 KDM6AO15550 1401 aaPredicted RBP12.22□□□□□ -0.45
UBC-211ENST00000542416 POLRMTO00411 1230 aaKnown RBP12.22□□□□□ -0.45
UBC-211ENST00000542416 TM4SF1P30408 202 aa12.22□□□□□ -0.45
UBC-211ENST00000542416 DDR1Q08345 913 aa12.22□□□□□ -0.45
UBC-211ENST00000542416 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
UBC-211ENST00000542416 RRAGCQ9HB90 399 aa12.22□□□□□ -0.45
UBC-211ENST00000542416 ANKRD26Q9UPS8 1709 aa12.22□□□□□ -0.45
UBC-211ENST00000542416 KIF13BQ9NQT8 1826 aa12.21□□□□□ -0.45
UBC-211ENST00000542416 C4AP0C0L4 1744 aa12.21□□□□□ -0.45
UBC-211ENST00000542416 CHRNA5P30532 468 aa12.21□□□□□ -0.45
UBC-211ENST00000542416 AKAP4Q5JQC9 854 aa12.21□□□□□ -0.45
UBC-211ENST00000542416 SULT6B1Q6IMI4 303 aa12.21□□□□□ -0.45
UBC-211ENST00000542416 INTS5Q6P9B9 1019 aaKnown RBP12.21□□□□□ -0.45
UBC-211ENST00000542416 PANK3Q9H999 370 aa12.21□□□□□ -0.45
UBC-211ENST00000542416 CLSPNQ9HAW4 1339 aa12.2□□□□□ -0.46
UBC-211ENST00000542416 VEGFAP15692 232 aaPredicted RBP12.2□□□□□ -0.46
UBC-211ENST00000542416 LMNB1P20700 586 aa12.2□□□□□ -0.46
UBC-211ENST00000542416 EIF4G2P78344 907 aaKnown RBP eCLIP12.2□□□□□ -0.46
UBC-211ENST00000542416 GLTPD2A6NH11 291 aa12.19□□□□□ -0.46
UBC-211ENST00000542416 TRIM26Q12899 539 aaPredicted RBP12.19□□□□□ -0.46
UBC-211ENST00000542416 USPL1Q5W0Q7 1092 aa12.19□□□□□ -0.46
UBC-211ENST00000542416 AEBP1Q8IUX7 1158 aa12.19□□□□□ -0.46
UBC-211ENST00000542416 TTLL6Q8N841 843 aa12.19□□□□□ -0.46
UBC-211ENST00000542416 SLC52A2Q9HAB3 445 aa12.19□□□□□ -0.46
UBC-211ENST00000542416 NARFQ9UHQ1 456 aa12.19□□□□□ -0.46
UBC-211ENST00000542416 PDZRN3Q9UPQ7 1066 aa12.19□□□□□ -0.46
UBC-211ENST00000542416 KNSTRNQ9Y448 316 aa12.19□□□□□ -0.46
UBC-211ENST00000542416 KCPQ6ZWJ8 1503 aa12.19□□□□□ -0.46
UBC-211ENST00000542416 SOS1Q07889 1333 aaPredicted RBP12.18□□□□□ -0.46
UBC-211ENST00000542416 DPY19L2Q6NUT2 758 aa12.18□□□□□ -0.46
UBC-211ENST00000542416 DNAJC10Q8IXB1 793 aa12.18□□□□□ -0.46
UBC-211ENST00000542416 VSIG10Q8N0Z9 540 aa12.18□□□□□ -0.46
UBC-211ENST00000542416 H0YIN7 160 aa12.17□□□□□ -0.46
UBC-211ENST00000542416 CYP19A1P11511 503 aaPredicted RBP12.17□□□□□ -0.46
UBC-211ENST00000542416 IL13P35225 146 aa12.17□□□□□ -0.46
UBC-211ENST00000542416 HTRA3P83110 453 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms