RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 LARP1Q6PKG0 1096 aaKnown RBP14.07□□□□□ -0.16
SCG3-202ENST00000542355 BTG4Q9NY30 223 aa14.06□□□□□ -0.16
SCG3-202ENST00000542355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.06□□□□□ -0.16
SCG3-202ENST00000542355 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
SCG3-202ENST00000542355 MEGF6O75095 1541 aa14.06□□□□□ -0.16
SCG3-202ENST00000542355 AHDC1Q5TGY3 1603 aaPredicted RBP14.06□□□□□ -0.16
SCG3-202ENST00000542355 LMO7Q8WWI1 1683 aa14.06□□□□□ -0.16
SCG3-202ENST00000542355 MVPQ14764 893 aaKnown RBP14.06□□□□□ -0.16
SCG3-202ENST00000542355 BTBD11A6QL63 1104 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 PHKG2P15735 406 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 ARHGAP45Q92619 1136 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 ITPRIPQ8IWB1 547 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 IFNL2Q8IZJ0 200 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 TMEM57Q8N5G2 664 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 CARD10Q9BWT7 1032 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 USP35Q9P2H5 1018 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 FAM208AQ9UK61 1670 aaKnown RBP14.03□□□□□ -0.16
SCG3-202ENST00000542355 CYP27B1O15528 508 aa14.03□□□□□ -0.16
SCG3-202ENST00000542355 KCNQ3O43525 872 aa14.03□□□□□ -0.16
SCG3-202ENST00000542355 LRRC37A3O60309 1634 aa14.02□□□□□ -0.16
SCG3-202ENST00000542355 ADAMTS2O95450 1211 aa14.02□□□□□ -0.16
SCG3-202ENST00000542355 ABCA3Q99758 1704 aa14.02□□□□□ -0.16
SCG3-202ENST00000542355 IL2RBP14784 551 aa14.02□□□□□ -0.17
SCG3-202ENST00000542355 EIF4A1P60842 406 aaKnown RBP14.02□□□□□ -0.17
SCG3-202ENST00000542355 MYT1Q01538 1121 aa14.02□□□□□ -0.17
SCG3-202ENST00000542355 AAMPQ13685 434 aa14.02□□□□□ -0.17
SCG3-202ENST00000542355 NECTIN2Q92692 538 aa14.02□□□□□ -0.17
SCG3-202ENST00000542355 DDX19BQ9UMR2 479 aa14.02□□□□□ -0.17
SCG3-202ENST00000542355 NUTM2BA6NNL0 878 aaPredicted RBP14.01□□□□□ -0.17
SCG3-202ENST00000542355 NUTM2EB1AL46 878 aaPredicted RBP14.01□□□□□ -0.17
SCG3-202ENST00000542355 NUTM2AQ8IVF1 878 aaPredicted RBP14.01□□□□□ -0.17
SCG3-202ENST00000542355 ZCRB1Q8TBF4 217 aaKnown RBP14.01□□□□□ -0.17
SCG3-202ENST00000542355 CCDC30Q5VVM6 783 aa14□□□□□ -0.17
SCG3-202ENST00000542355 API5Q9BZZ5 524 aaKnown RBP14□□□□□ -0.17
SCG3-202ENST00000542355 KDM2BQ8NHM5 1336 aa14□□□□□ -0.17
SCG3-202ENST00000542355 OVOS2A0A0G2JMS6 1433 aa14□□□□□ -0.17
SCG3-202ENST00000542355 CENPQQ7L2Z9 268 aaPredicted RBP14□□□□□ -0.17
SCG3-202ENST00000542355 NFATC2IPQ8NCF5 419 aa14□□□□□ -0.17
SCG3-202ENST00000542355 DCAF5Q96JK2 942 aa14□□□□□ -0.17
SCG3-202ENST00000542355 STK31Q9BXU1 1019 aa14□□□□□ -0.17
SCG3-202ENST00000542355 PCDHB15Q9Y5E8 787 aa14□□□□□ -0.17
SCG3-202ENST00000542355 PLEKHG2Q9H7P9 1386 aa14□□□□□ -0.17
SCG3-202ENST00000542355 IGHDP01880 384 aa13.99□□□□□ -0.17
SCG3-202ENST00000542355 HSP90AB1P08238 724 aaKnown RBP13.99□□□□□ -0.17
SCG3-202ENST00000542355 SLC52A2Q9HAB3 445 aa13.99□□□□□ -0.17
SCG3-202ENST00000542355 SOS1Q07889 1333 aaPredicted RBP13.99□□□□□ -0.17
SCG3-202ENST00000542355 DDX54Q8TDD1 881 aaKnown RBP13.99□□□□□ -0.17
SCG3-202ENST00000542355 KDM6AO15550 1401 aaPredicted RBP13.98□□□□□ -0.17
SCG3-202ENST00000542355 PHLPP1O60346 1717 aa13.98□□□□□ -0.17
SCG3-202ENST00000542355 EIF2S2P20042 333 aaKnown RBP13.98□□□□□ -0.17
SCG3-202ENST00000542355 HDGFL1Q5TGJ6 251 aa13.98□□□□□ -0.17
SCG3-202ENST00000542355 G2E3Q7L622 706 aa13.98□□□□□ -0.17
SCG3-202ENST00000542355 ABCC4O15439 1325 aa13.98□□□□□ -0.17
SCG3-202ENST00000542355 COL16A1Q07092 1604 aaPredicted RBP13.97□□□□□ -0.17
SCG3-202ENST00000542355 PTPRCP08575 1304 aa13.97□□□□□ -0.17
SCG3-202ENST00000542355 PCDH11XQ9BZA7 1347 aa13.97□□□□□ -0.17
SCG3-202ENST00000542355 PCDH11YQ9BZA8 1340 aa13.97□□□□□ -0.17
SCG3-202ENST00000542355 SLC39A6Q13433 755 aa13.97□□□□□ -0.17
SCG3-202ENST00000542355 CERKQ8TCT0 537 aa13.97□□□□□ -0.17
SCG3-202ENST00000542355 COL22A1Q8NFW1 1626 aaPredicted RBP13.96□□□□□ -0.17
SCG3-202ENST00000542355 ZBTB7BO15156 539 aaPredicted RBP13.96□□□□□ -0.17
SCG3-202ENST00000542355 CABP4P57796 275 aa13.96□□□□□ -0.17
SCG3-202ENST00000542355 ZBTB40Q9NUA8 1239 aa13.96□□□□□ -0.17
SCG3-202ENST00000542355 ZNF790Q6PG37 636 aa13.96□□□□□ -0.18
SCG3-202ENST00000542355 GIGYF1O75420 1035 aaPredicted RBP13.95□□□□□ -0.18
SCG3-202ENST00000542355 HOXB7P09629 217 aa13.95□□□□□ -0.18
SCG3-202ENST00000542355 SKAP1Q86WV1 359 aa13.95□□□□□ -0.18
SCG3-202ENST00000542355 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
SCG3-202ENST00000542355 FLIIQ13045 1269 aa13.94□□□□□ -0.18
SCG3-202ENST00000542355 COL14A1Q05707 1796 aaKnown RBP13.94□□□□□ -0.18
SCG3-202ENST00000542355 F6X3S4 739 aa13.93□□□□□ -0.18
SCG3-202ENST00000542355 FKBP5Q13451 457 aaPredicted RBP13.93□□□□□ -0.18
SCG3-202ENST00000542355 INTS3Q68E01 1043 aaKnown RBP13.93□□□□□ -0.18
SCG3-202ENST00000542355 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
SCG3-202ENST00000542355 CHMP4AQ9BY43 222 aa13.93□□□□□ -0.18
SCG3-202ENST00000542355 CHMP4BQ9H444 224 aaKnown RBP13.93□□□□□ -0.18
SCG3-202ENST00000542355 RWDD1Q9H446 243 aaPredicted RBP13.93□□□□□ -0.18
SCG3-202ENST00000542355 NKX1-1Q15270 411 aaPredicted RBP13.93□□□□□ -0.18
SCG3-202ENST00000542355 CHPF2Q9P2E5 772 aa13.93□□□□□ -0.18
SCG3-202ENST00000542355 RGS12O14924 1447 aa13.93□□□□□ -0.18
SCG3-202ENST00000542355 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
SCG3-202ENST00000542355 PHAXQ9H814 394 aaKnown RBP13.92□□□□□ -0.18
SCG3-202ENST00000542355 HEG1Q9ULI3 1381 aa13.92□□□□□ -0.18
SCG3-202ENST00000542355 ADAMTS7Q9UKP4 1686 aa13.92□□□□□ -0.18
SCG3-202ENST00000542355 PKD1L3Q7Z443 1732 aa13.92□□□□□ -0.18
SCG3-202ENST00000542355 ERVV-2B6SEH9 535 aa13.91□□□□□ -0.18
SCG3-202ENST00000542355 ZNF496Q96IT1 587 aaPredicted RBP13.91□□□□□ -0.18
SCG3-202ENST00000542355 C1orf115Q9H7X2 142 aa13.91□□□□□ -0.18
SCG3-202ENST00000542355 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
SCG3-202ENST00000542355 ANXA1P04083 346 aa13.9□□□□□ -0.18
SCG3-202ENST00000542355 KDM3BQ7LBC6 1761 aa13.9□□□□□ -0.18
SCG3-202ENST00000542355 PARP4Q9UKK3 1724 aaKnown RBP13.9□□□□□ -0.18
SCG3-202ENST00000542355 JCADQ9P266 1359 aa13.9□□□□□ -0.18
SCG3-202ENST00000542355 EXOC5O00471 708 aa13.9□□□□□ -0.18
SCG3-202ENST00000542355 DBF4Q9UBU7 674 aaPredicted RBP13.9□□□□□ -0.18
SCG3-202ENST00000542355 CCDC9Q9Y3X0 531 aaKnown RBP13.9□□□□□ -0.18
SCG3-202ENST00000542355 HDAC1Q13547 482 aaPredicted RBP13.89□□□□□ -0.19
SCG3-202ENST00000542355 C8orf37Q96NL8 207 aa13.89□□□□□ -0.19
SCG3-202ENST00000542355 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
SCG3-202ENST00000542355 SPATA31A1Q5TZJ5 1347 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms