RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 LARP1Q6PKG0 1096 aaKnown RBP14.07□□□□□ -0.16
SCG3-202ENST00000542355 BTG4Q9NY30 223 aa14.06□□□□□ -0.16
SCG3-202ENST00000542355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.06□□□□□ -0.16
SCG3-202ENST00000542355 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
SCG3-202ENST00000542355 MEGF6O75095 1541 aa14.06□□□□□ -0.16
SCG3-202ENST00000542355 AHDC1Q5TGY3 1603 aaPredicted RBP14.06□□□□□ -0.16
SCG3-202ENST00000542355 LMO7Q8WWI1 1683 aa14.06□□□□□ -0.16
SCG3-202ENST00000542355 MVPQ14764 893 aaKnown RBP14.06□□□□□ -0.16
SCG3-202ENST00000542355 BTBD11A6QL63 1104 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 PHKG2P15735 406 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 ARHGAP45Q92619 1136 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 ITPRIPQ8IWB1 547 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 IFNL2Q8IZJ0 200 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 TMEM57Q8N5G2 664 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 CARD10Q9BWT7 1032 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 USP35Q9P2H5 1018 aa14.05□□□□□ -0.16
SCG3-202ENST00000542355 FAM208AQ9UK61 1670 aaKnown RBP14.03□□□□□ -0.16
SCG3-202ENST00000542355 CYP27B1O15528 508 aa14.03□□□□□ -0.16
SCG3-202ENST00000542355 KCNQ3O43525 872 aa14.03□□□□□ -0.16
SCG3-202ENST00000542355 LRRC37A3O60309 1634 aa14.02□□□□□ -0.16
SCG3-202ENST00000542355 ADAMTS2O95450 1211 aa14.02□□□□□ -0.16
SCG3-202ENST00000542355 ABCA3Q99758 1704 aa14.02□□□□□ -0.16
SCG3-202ENST00000542355 IL2RBP14784 551 aa14.02□□□□□ -0.17
SCG3-202ENST00000542355 EIF4A1P60842 406 aaKnown RBP14.02□□□□□ -0.17
SCG3-202ENST00000542355 MYT1Q01538 1121 aa14.02□□□□□ -0.17
SCG3-202ENST00000542355 AAMPQ13685 434 aa14.02□□□□□ -0.17
SCG3-202ENST00000542355 NECTIN2Q92692 538 aa14.02□□□□□ -0.17
SCG3-202ENST00000542355 DDX19BQ9UMR2 479 aa14.02□□□□□ -0.17
SCG3-202ENST00000542355 NUTM2BA6NNL0 878 aaPredicted RBP14.01□□□□□ -0.17
SCG3-202ENST00000542355 NUTM2EB1AL46 878 aaPredicted RBP14.01□□□□□ -0.17
SCG3-202ENST00000542355 NUTM2AQ8IVF1 878 aaPredicted RBP14.01□□□□□ -0.17
SCG3-202ENST00000542355 ZCRB1Q8TBF4 217 aaKnown RBP14.01□□□□□ -0.17
SCG3-202ENST00000542355 CCDC30Q5VVM6 783 aa14□□□□□ -0.17
SCG3-202ENST00000542355 API5Q9BZZ5 524 aaKnown RBP14□□□□□ -0.17
SCG3-202ENST00000542355 KDM2BQ8NHM5 1336 aa14□□□□□ -0.17
SCG3-202ENST00000542355 OVOS2A0A0G2JMS6 1433 aa14□□□□□ -0.17
SCG3-202ENST00000542355 CENPQQ7L2Z9 268 aaPredicted RBP14□□□□□ -0.17
SCG3-202ENST00000542355 NFATC2IPQ8NCF5 419 aa14□□□□□ -0.17
SCG3-202ENST00000542355 DCAF5Q96JK2 942 aa14□□□□□ -0.17
SCG3-202ENST00000542355 STK31Q9BXU1 1019 aa14□□□□□ -0.17
SCG3-202ENST00000542355 PCDHB15Q9Y5E8 787 aa14□□□□□ -0.17
SCG3-202ENST00000542355 PLEKHG2Q9H7P9 1386 aa14□□□□□ -0.17
SCG3-202ENST00000542355 IGHDP01880 384 aa13.99□□□□□ -0.17
SCG3-202ENST00000542355 HSP90AB1P08238 724 aaKnown RBP13.99□□□□□ -0.17
SCG3-202ENST00000542355 SLC52A2Q9HAB3 445 aa13.99□□□□□ -0.17
SCG3-202ENST00000542355 SOS1Q07889 1333 aaPredicted RBP13.99□□□□□ -0.17
SCG3-202ENST00000542355 DDX54Q8TDD1 881 aaKnown RBP13.99□□□□□ -0.17
SCG3-202ENST00000542355 KDM6AO15550 1401 aaPredicted RBP13.98□□□□□ -0.17
SCG3-202ENST00000542355 PHLPP1O60346 1717 aa13.98□□□□□ -0.17
SCG3-202ENST00000542355 EIF2S2P20042 333 aaKnown RBP13.98□□□□□ -0.17
SCG3-202ENST00000542355 HDGFL1Q5TGJ6 251 aa13.98□□□□□ -0.17
SCG3-202ENST00000542355 G2E3Q7L622 706 aa13.98□□□□□ -0.17
SCG3-202ENST00000542355 ABCC4O15439 1325 aa13.98□□□□□ -0.17
SCG3-202ENST00000542355 COL16A1Q07092 1604 aaPredicted RBP13.97□□□□□ -0.17
SCG3-202ENST00000542355 PTPRCP08575 1304 aa13.97□□□□□ -0.17
SCG3-202ENST00000542355 PCDH11XQ9BZA7 1347 aa13.97□□□□□ -0.17
SCG3-202ENST00000542355 PCDH11YQ9BZA8 1340 aa13.97□□□□□ -0.17
SCG3-202ENST00000542355 SLC39A6Q13433 755 aa13.97□□□□□ -0.17
SCG3-202ENST00000542355 CERKQ8TCT0 537 aa13.97□□□□□ -0.17
SCG3-202ENST00000542355 COL22A1Q8NFW1 1626 aaPredicted RBP13.96□□□□□ -0.17
SCG3-202ENST00000542355 ZBTB7BO15156 539 aaPredicted RBP13.96□□□□□ -0.17
SCG3-202ENST00000542355 CABP4P57796 275 aa13.96□□□□□ -0.17
SCG3-202ENST00000542355 ZBTB40Q9NUA8 1239 aa13.96□□□□□ -0.17
SCG3-202ENST00000542355 ZNF790Q6PG37 636 aa13.96□□□□□ -0.18
SCG3-202ENST00000542355 GIGYF1O75420 1035 aaPredicted RBP13.95□□□□□ -0.18
SCG3-202ENST00000542355 HOXB7P09629 217 aa13.95□□□□□ -0.18
SCG3-202ENST00000542355 SKAP1Q86WV1 359 aa13.95□□□□□ -0.18
SCG3-202ENST00000542355 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
SCG3-202ENST00000542355 FLIIQ13045 1269 aa13.94□□□□□ -0.18
SCG3-202ENST00000542355 COL14A1Q05707 1796 aaKnown RBP13.94□□□□□ -0.18
SCG3-202ENST00000542355 F6X3S4 739 aa13.93□□□□□ -0.18
SCG3-202ENST00000542355 FKBP5Q13451 457 aaPredicted RBP13.93□□□□□ -0.18
SCG3-202ENST00000542355 INTS3Q68E01 1043 aaKnown RBP13.93□□□□□ -0.18
SCG3-202ENST00000542355 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
SCG3-202ENST00000542355 CHMP4AQ9BY43 222 aa13.93□□□□□ -0.18
SCG3-202ENST00000542355 CHMP4BQ9H444 224 aaKnown RBP13.93□□□□□ -0.18
SCG3-202ENST00000542355 RWDD1Q9H446 243 aaPredicted RBP13.93□□□□□ -0.18
SCG3-202ENST00000542355 NKX1-1Q15270 411 aaPredicted RBP13.93□□□□□ -0.18
SCG3-202ENST00000542355 CHPF2Q9P2E5 772 aa13.93□□□□□ -0.18
SCG3-202ENST00000542355 RGS12O14924 1447 aa13.93□□□□□ -0.18
SCG3-202ENST00000542355 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
SCG3-202ENST00000542355 PHAXQ9H814 394 aaKnown RBP13.92□□□□□ -0.18
SCG3-202ENST00000542355 HEG1Q9ULI3 1381 aa13.92□□□□□ -0.18
SCG3-202ENST00000542355 ADAMTS7Q9UKP4 1686 aa13.92□□□□□ -0.18
SCG3-202ENST00000542355 PKD1L3Q7Z443 1732 aa13.92□□□□□ -0.18
SCG3-202ENST00000542355 ERVV-2B6SEH9 535 aa13.91□□□□□ -0.18
SCG3-202ENST00000542355 ZNF496Q96IT1 587 aaPredicted RBP13.91□□□□□ -0.18
SCG3-202ENST00000542355 C1orf115Q9H7X2 142 aa13.91□□□□□ -0.18
SCG3-202ENST00000542355 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
SCG3-202ENST00000542355 ANXA1P04083 346 aa13.9□□□□□ -0.18
SCG3-202ENST00000542355 KDM3BQ7LBC6 1761 aa13.9□□□□□ -0.18
SCG3-202ENST00000542355 PARP4Q9UKK3 1724 aaKnown RBP13.9□□□□□ -0.18
SCG3-202ENST00000542355 JCADQ9P266 1359 aa13.9□□□□□ -0.18
SCG3-202ENST00000542355 EXOC5O00471 708 aa13.9□□□□□ -0.18
SCG3-202ENST00000542355 DBF4Q9UBU7 674 aaPredicted RBP13.9□□□□□ -0.18
SCG3-202ENST00000542355 CCDC9Q9Y3X0 531 aaKnown RBP13.9□□□□□ -0.18
SCG3-202ENST00000542355 HDAC1Q13547 482 aaPredicted RBP13.89□□□□□ -0.19
SCG3-202ENST00000542355 C8orf37Q96NL8 207 aa13.89□□□□□ -0.19
SCG3-202ENST00000542355 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
SCG3-202ENST00000542355 SPATA31A1Q5TZJ5 1347 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms