RNA–Protein interactions for RNA: ENST00000542338.1

NPIPB4-216, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-216ENST00000542338 PHKG2P15735 406 aa12.2□□□□□ -0.46
NPIPB4-216ENST00000542338 DCAF5Q96JK2 942 aa12.2□□□□□ -0.46
NPIPB4-216ENST00000542338 MEGF6O75095 1541 aa12.2□□□□□ -0.46
NPIPB4-216ENST00000542338 RNMTO43148 476 aaKnown RBP12.19□□□□□ -0.46
NPIPB4-216ENST00000542338 TRIM37O94972 964 aa12.19□□□□□ -0.46
NPIPB4-216ENST00000542338 CT47B1P0C2W7 299 aaPredicted RBP12.19□□□□□ -0.46
NPIPB4-216ENST00000542338 TEFQ10587 303 aa12.19□□□□□ -0.46
NPIPB4-216ENST00000542338 NKX1-1Q15270 411 aaPredicted RBP12.19□□□□□ -0.46
NPIPB4-216ENST00000542338 MCM10Q7L590 875 aa12.19□□□□□ -0.46
NPIPB4-216ENST00000542338 CDCA7LQ96GN5 454 aa12.19□□□□□ -0.46
NPIPB4-216ENST00000542338 U3KPZ7 1027 aaPredicted RBP12.19□□□□□ -0.46
NPIPB4-216ENST00000542338 NUP188Q5SRE5 1749 aa12.19□□□□□ -0.46
NPIPB4-216ENST00000542338 TNS2Q63HR2 1409 aa12.19□□□□□ -0.46
NPIPB4-216ENST00000542338 ZNF853P0CG23 659 aa12.18□□□□□ -0.46
NPIPB4-216ENST00000542338 R3HDM1Q15032 1099 aaKnown RBP12.18□□□□□ -0.46
NPIPB4-216ENST00000542338 TAF7Q15545 349 aaPredicted RBP12.18□□□□□ -0.46
NPIPB4-216ENST00000542338 DUSP27Q5VZP5 1158 aa12.18□□□□□ -0.46
NPIPB4-216ENST00000542338 IL17REQ8NFR9 667 aa12.18□□□□□ -0.46
NPIPB4-216ENST00000542338 CHMP4AQ9BY43 222 aa12.18□□□□□ -0.46
NPIPB4-216ENST00000542338 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
NPIPB4-216ENST00000542338 CHL1O00533 1208 aa12.17□□□□□ -0.46
NPIPB4-216ENST00000542338 CYP27B1O15528 508 aa12.17□□□□□ -0.46
NPIPB4-216ENST00000542338 APBA3O96018 575 aa12.17□□□□□ -0.46
NPIPB4-216ENST00000542338 DCTN1Q14203 1278 aa12.17□□□□□ -0.46
NPIPB4-216ENST00000542338 EZH2Q15910 746 aaKnown RBP12.17□□□□□ -0.46
NPIPB4-216ENST00000542338 MPRIPQ6WCQ1 1025 aa12.17□□□□□ -0.46
NPIPB4-216ENST00000542338 DDX54Q8TDD1 881 aaKnown RBP12.17□□□□□ -0.46
NPIPB4-216ENST00000542338 LAS1LQ9Y4W2 734 aaKnown RBP12.17□□□□□ -0.46
NPIPB4-216ENST00000542338 RGPD3A6NKT7 1758 aaPredicted RBP12.16□□□□□ -0.46
NPIPB4-216ENST00000542338 RGPD4Q7Z3J3 1758 aa12.16□□□□□ -0.46
NPIPB4-216ENST00000542338 ERVV-2B6SEH9 535 aa12.16□□□□□ -0.46
NPIPB4-216ENST00000542338 ZNF428Q96B54 188 aa12.16□□□□□ -0.46
NPIPB4-216ENST00000542338 THUMPD2Q9BTF0 503 aaKnown RBP12.16□□□□□ -0.46
NPIPB4-216ENST00000542338 BCL9O00512 1426 aa12.16□□□□□ -0.46
NPIPB4-216ENST00000542338 PKD1L3Q7Z443 1732 aa12.15□□□□□ -0.46
NPIPB4-216ENST00000542338 LGR6Q9HBX8 967 aa12.15□□□□□ -0.46
NPIPB4-216ENST00000542338 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
NPIPB4-216ENST00000542338 SOS1Q07889 1333 aaPredicted RBP12.14□□□□□ -0.47
NPIPB4-216ENST00000542338 FANCIQ9NVI1 1328 aa12.14□□□□□ -0.47
NPIPB4-216ENST00000542338 CABP4P57796 275 aa12.14□□□□□ -0.47
NPIPB4-216ENST00000542338 CAMKK2Q96RR4 588 aa12.14□□□□□ -0.47
NPIPB4-216ENST00000542338 SLC52A2Q9HAB3 445 aa12.14□□□□□ -0.47
NPIPB4-216ENST00000542338 TSPYL4Q9UJ04 414 aa12.14□□□□□ -0.47
NPIPB4-216ENST00000542338 BTBD11A6QL63 1104 aa12.13□□□□□ -0.47
NPIPB4-216ENST00000542338 MBIPQ9NS73 344 aa12.13□□□□□ -0.47
NPIPB4-216ENST00000542338 RCAN3Q9UKA8 241 aa12.13□□□□□ -0.47
NPIPB4-216ENST00000542338 SBF2Q86WG5 1849 aa12.13□□□□□ -0.47
NPIPB4-216ENST00000542338 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
NPIPB4-216ENST00000542338 EXOSC9Q06265 439 aaKnown RBP12.12□□□□□ -0.47
NPIPB4-216ENST00000542338 C1QBPQ07021 282 aaKnown RBP12.12□□□□□ -0.47
NPIPB4-216ENST00000542338 NBPF14Q5TI25 921 aa12.12□□□□□ -0.47
NPIPB4-216ENST00000542338 NHSQ6T4R5 1651 aa12.11□□□□□ -0.47
NPIPB4-216ENST00000542338 MARCH10Q8NA82 808 aaPredicted RBP12.11□□□□□ -0.47
NPIPB4-216ENST00000542338 NFATC2IPQ8NCF5 419 aa12.11□□□□□ -0.47
NPIPB4-216ENST00000542338 TSR2Q969E8 191 aaKnown RBP12.11□□□□□ -0.47
NPIPB4-216ENST00000542338 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
NPIPB4-216ENST00000542338 TTC5Q8N0Z6 440 aa12.1□□□□□ -0.47
NPIPB4-216ENST00000542338 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.1□□□□□ -0.47
NPIPB4-216ENST00000542338 TMOD3Q9NYL9 352 aa12.1□□□□□ -0.47
NPIPB4-216ENST00000542338 KDM6AO15550 1401 aaPredicted RBP12.1□□□□□ -0.47
NPIPB4-216ENST00000542338 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
NPIPB4-216ENST00000542338 PLSCR1O15162 318 aa12.09□□□□□ -0.47
NPIPB4-216ENST00000542338 HOXB7P09629 217 aa12.09□□□□□ -0.47
NPIPB4-216ENST00000542338 TWISTNBQ3B726 338 aaPredicted RBP12.09□□□□□ -0.47
NPIPB4-216ENST00000542338 ALDH1L2Q3SY69 923 aa12.09□□□□□ -0.47
NPIPB4-216ENST00000542338 ZNF790Q6PG37 636 aa12.08□□□□□ -0.48
NPIPB4-216ENST00000542338 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
NPIPB4-216ENST00000542338 MRC1P22897 1456 aa12.08□□□□□ -0.48
NPIPB4-216ENST00000542338 VAMP4O75379 141 aa12.07□□□□□ -0.48
NPIPB4-216ENST00000542338 EIF4A1P60842 406 aaKnown RBP12.07□□□□□ -0.48
NPIPB4-216ENST00000542338 SCN11AQ9UI33 1791 aa12.06□□□□□ -0.48
NPIPB4-216ENST00000542338 NEFLP07196 543 aa12.06□□□□□ -0.48
NPIPB4-216ENST00000542338 RARSP54136 660 aaKnown RBP12.06□□□□□ -0.48
NPIPB4-216ENST00000542338 CCDC30Q5VVM6 783 aa12.06□□□□□ -0.48
NPIPB4-216ENST00000542338 C8orf58Q8NAV2 365 aa12.06□□□□□ -0.48
NPIPB4-216ENST00000542338 FMNL2Q96PY5 1086 aa12.06□□□□□ -0.48
NPIPB4-216ENST00000542338 SUPT16HQ9Y5B9 1047 aaKnown RBP12.06□□□□□ -0.48
NPIPB4-216ENST00000542338 IPO8O15397 1037 aaKnown RBP12.05□□□□□ -0.48
NPIPB4-216ENST00000542338 MS4A1P11836 297 aa12.05□□□□□ -0.48
NPIPB4-216ENST00000542338 HMGB2P26583 209 aaKnown RBP12.05□□□□□ -0.48
NPIPB4-216ENST00000542338 BRPF1P55201 1214 aaPredicted RBP12.05□□□□□ -0.48
NPIPB4-216ENST00000542338 SMARCC1Q92922 1105 aaPredicted RBP12.05□□□□□ -0.48
NPIPB4-216ENST00000542338 TEX13AQ9BXU3 409 aaPredicted RBP12.05□□□□□ -0.48
NPIPB4-216ENST00000542338 PPP1R1BQ9UD71 204 aaPredicted RBP12.05□□□□□ -0.48
NPIPB4-216ENST00000542338 SHANK3Q9BYB0 1731 aa12.04□□□□□ -0.48
NPIPB4-216ENST00000542338 ELL2O00472 640 aaPredicted RBP12.04□□□□□ -0.48
NPIPB4-216ENST00000542338 ZBTB22O15209 634 aa12.04□□□□□ -0.48
NPIPB4-216ENST00000542338 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
NPIPB4-216ENST00000542338 VSIG10Q8N0Z9 540 aa12.04□□□□□ -0.48
NPIPB4-216ENST00000542338 PIGBQ92521 554 aa12.04□□□□□ -0.48
NPIPB4-216ENST00000542338 SYTL4Q96C24 671 aaPredicted RBP12.04□□□□□ -0.48
NPIPB4-216ENST00000542338 STK31Q9BXU1 1019 aa12.04□□□□□ -0.48
NPIPB4-216ENST00000542338 SPON1Q9HCB6 807 aa12.04□□□□□ -0.48
NPIPB4-216ENST00000542338 SMC4Q9NTJ3 1288 aa12.04□□□□□ -0.48
NPIPB4-216ENST00000542338 CASZ1Q86V15 1759 aa12.04□□□□□ -0.48
NPIPB4-216ENST00000542338 DOT1LQ8TEK3 1739 aa12.03□□□□□ -0.48
NPIPB4-216ENST00000542338 GIGYF1O75420 1035 aaPredicted RBP12.03□□□□□ -0.48
NPIPB4-216ENST00000542338 SNRPA1P09661 255 aaKnown RBP12.03□□□□□ -0.48
NPIPB4-216ENST00000542338 TSPYL6Q8N831 410 aa12.03□□□□□ -0.48
NPIPB4-216ENST00000542338 ACSBG1Q96GR2 724 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms