RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 ZHX1Q9UKY1 873 aaPredicted RBP16.35■□□□□ 0.21
TRPM1-203ENST00000542188 ANAPC4Q9UJX5 808 aa16.35■□□□□ 0.21
TRPM1-203ENST00000542188 CEP83Q9Y592 693 aa16.35■□□□□ 0.21
TRPM1-203ENST00000542188 TWISTNBQ3B726 338 aaPredicted RBP16.34■□□□□ 0.21
TRPM1-203ENST00000542188 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
TRPM1-203ENST00000542188 IKBKGQ9Y6K9 419 aa16.34■□□□□ 0.21
TRPM1-203ENST00000542188 KRT222Q8N1A0 295 aa16.34■□□□□ 0.21
TRPM1-203ENST00000542188 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
TRPM1-203ENST00000542188 SETSIPP0DME0 302 aa16.34■□□□□ 0.21
TRPM1-203ENST00000542188 CHD1LQ86WJ1 897 aa16.34■□□□□ 0.21
TRPM1-203ENST00000542188 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRPM1-203ENST00000542188 NOB1Q9ULX3 412 aaKnown RBP16.34■□□□□ 0.21
TRPM1-203ENST00000542188 IFI16Q16666 785 aaKnown RBP16.33■□□□□ 0.21
TRPM1-203ENST00000542188 MXRA7P84157 204 aa16.33■□□□□ 0.21
TRPM1-203ENST00000542188 ABCC8Q09428 1581 aa16.33■□□□□ 0.21
TRPM1-203ENST00000542188 TDRD12Q587J7 1177 aaKnown RBP16.33■□□□□ 0.21
TRPM1-203ENST00000542188 KLHL34Q8N239 644 aa16.33■□□□□ 0.21
TRPM1-203ENST00000542188 STMN4Q9H169 189 aaPredicted RBP16.33■□□□□ 0.21
TRPM1-203ENST00000542188 TDO2P48775 406 aa16.33■□□□□ 0.2
TRPM1-203ENST00000542188 XPCQ01831 940 aaPredicted RBP16.33■□□□□ 0.2
TRPM1-203ENST00000542188 SNW1Q13573 536 aaKnown RBP16.33■□□□□ 0.2
TRPM1-203ENST00000542188 RAB3IL1Q8TBN0 382 aa16.33■□□□□ 0.2
TRPM1-203ENST00000542188 FERMT2Q96AC1 680 aa16.33■□□□□ 0.2
TRPM1-203ENST00000542188 C1orf115Q9H7X2 142 aa16.33■□□□□ 0.2
TRPM1-203ENST00000542188 A0A1W2PRG0 241 aa16.32■□□□□ 0.2
TRPM1-203ENST00000542188 CECR2Q9BXF3 1484 aa16.32■□□□□ 0.2
TRPM1-203ENST00000542188 PLEKHO1Q53GL0 409 aaPredicted RBP16.32■□□□□ 0.2
TRPM1-203ENST00000542188 ANKS4BQ8N8V4 417 aa16.32■□□□□ 0.2
TRPM1-203ENST00000542188 KIF4AO95239 1232 aa16.32■□□□□ 0.2
TRPM1-203ENST00000542188 EXOSC9Q06265 439 aaKnown RBP16.31■□□□□ 0.2
TRPM1-203ENST00000542188 RAB34Q9BZG1 259 aa16.31■□□□□ 0.2
TRPM1-203ENST00000542188 MACROD2A1Z1Q3 448 aa16.31■□□□□ 0.2
TRPM1-203ENST00000542188 PNISRQ8TF01 805 aaKnown RBP16.31■□□□□ 0.2
TRPM1-203ENST00000542188 UBE2Q2Q8WVN8 375 aa16.31■□□□□ 0.2
TRPM1-203ENST00000542188 C16orf45Q96MC5 204 aaPredicted RBP16.31■□□□□ 0.2
TRPM1-203ENST00000542188 SSX2IPQ9Y2D8 614 aa16.31■□□□□ 0.2
TRPM1-203ENST00000542188 CETN1Q12798 172 aa16.31■□□□□ 0.2
TRPM1-203ENST00000542188 CEP135Q66GS9 1140 aa16.31■□□□□ 0.2
TRPM1-203ENST00000542188 SMC6Q96SB8 1091 aa16.31■□□□□ 0.2
TRPM1-203ENST00000542188 SMG6Q86US8 1419 aaKnown RBP16.31■□□□□ 0.2
TRPM1-203ENST00000542188 OPA1O60313 960 aa16.31■□□□□ 0.2
TRPM1-203ENST00000542188 PPM1FP49593 454 aaPredicted RBP16.31■□□□□ 0.2
TRPM1-203ENST00000542188 TTC14Q96N46 770 aa16.31■□□□□ 0.2
TRPM1-203ENST00000542188 SEC63Q9UGP8 760 aaKnown RBP16.31■□□□□ 0.2
TRPM1-203ENST00000542188 SERPINA10Q9UK55 444 aa16.31■□□□□ 0.2
TRPM1-203ENST00000542188 KIF3CO14782 793 aa16.3■□□□□ 0.2
TRPM1-203ENST00000542188 NLRP2Q9NX02 1062 aa16.3■□□□□ 0.2
TRPM1-203ENST00000542188 MAP4K4O95819 1239 aaPredicted RBP16.3■□□□□ 0.2
TRPM1-203ENST00000542188 CCDC171Q6TFL3 1326 aa16.3■□□□□ 0.2
TRPM1-203ENST00000542188 DNA2P51530 1060 aa16.3■□□□□ 0.2
TRPM1-203ENST00000542188 KLHL10Q6JEL2 608 aa16.3■□□□□ 0.2
TRPM1-203ENST00000542188 CPSF2Q9P2I0 782 aaKnown RBP16.3■□□□□ 0.2
TRPM1-203ENST00000542188 AACSQ86V21 672 aa16.29■□□□□ 0.2
TRPM1-203ENST00000542188 SCAPERQ9BY12 1400 aa16.29■□□□□ 0.2
TRPM1-203ENST00000542188 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
TRPM1-203ENST00000542188 TRMT1Q9NXH9 659 aaKnown RBP16.29■□□□□ 0.2
TRPM1-203ENST00000542188 CASTP20810 708 aaKnown RBP16.29■□□□□ 0.2
TRPM1-203ENST00000542188 TMEM266Q2M3C6 531 aa16.29■□□□□ 0.2
TRPM1-203ENST00000542188 UVSSAQ2YD98 709 aa16.29■□□□□ 0.2
TRPM1-203ENST00000542188 KIF5BP33176 963 aa16.29■□□□□ 0.2
TRPM1-203ENST00000542188 STX1AQ16623 288 aa16.29■□□□□ 0.2
TRPM1-203ENST00000542188 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
TRPM1-203ENST00000542188 ZNF287Q9HBT7 754 aa16.29■□□□□ 0.2
TRPM1-203ENST00000542188 TTC31Q49AM3 519 aaPredicted RBP16.29■□□□□ 0.2
TRPM1-203ENST00000542188 CCDC121Q6ZUS5 278 aa16.29■□□□□ 0.2
TRPM1-203ENST00000542188 LRRC45Q96CN5 670 aa16.29■□□□□ 0.2
TRPM1-203ENST00000542188 SH2B1Q9NRF2 756 aaPredicted RBP16.29■□□□□ 0.2
TRPM1-203ENST00000542188 ATP2C2O75185 946 aa16.28■□□□□ 0.2
TRPM1-203ENST00000542188 IQCGQ9H095 443 aaKnown RBP16.28■□□□□ 0.2
TRPM1-203ENST00000542188 ACTN2P35609 894 aa16.28■□□□□ 0.2
TRPM1-203ENST00000542188 HYPKQ9NX55 129 aa16.28■□□□□ 0.2
TRPM1-203ENST00000542188 RSPH14Q9UHP6 348 aa16.28■□□□□ 0.2
TRPM1-203ENST00000542188 ADAMTS8Q9UP79 889 aa16.28■□□□□ 0.2
TRPM1-203ENST00000542188 GOLIM4O00461 696 aa16.28■□□□□ 0.2
TRPM1-203ENST00000542188 ZFYP08048 801 aaPredicted RBP16.28■□□□□ 0.2
TRPM1-203ENST00000542188 RSRC1Q96IZ7 334 aaKnown RBP16.28■□□□□ 0.2
TRPM1-203ENST00000542188 SPDYE4A6NLX3 237 aa16.28■□□□□ 0.2
TRPM1-203ENST00000542188 KIAA0753Q2KHM9 967 aa16.28■□□□□ 0.2
TRPM1-203ENST00000542188 PYM1Q9BRP8 204 aaKnown RBP16.28■□□□□ 0.2
TRPM1-203ENST00000542188 RASAL2Q9UJF2 1139 aa16.28■□□□□ 0.2
TRPM1-203ENST00000542188 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.2
TRPM1-203ENST00000542188 TMC6Q7Z403 805 aa16.27■□□□□ 0.2
TRPM1-203ENST00000542188 CCDC196A0A1B0GTZ2 297 aa16.27■□□□□ 0.2
TRPM1-203ENST00000542188 USP5P45974 858 aa16.27■□□□□ 0.2
TRPM1-203ENST00000542188 FAM177BA6PVY3 158 aa16.27■□□□□ 0.19
TRPM1-203ENST00000542188 TMX1Q9H3N1 280 aa16.27■□□□□ 0.19
TRPM1-203ENST00000542188 MVPQ14764 893 aaKnown RBP16.27■□□□□ 0.19
TRPM1-203ENST00000542188 PLVAPQ9BX97 442 aa16.27■□□□□ 0.19
TRPM1-203ENST00000542188 BAZ1AQ9NRL2 1556 aaPredicted RBP16.27■□□□□ 0.19
TRPM1-203ENST00000542188 FKBP4Q02790 459 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRPM1-203ENST00000542188 PRPF4BQ13523 1007 aaKnown RBP16.26■□□□□ 0.19
TRPM1-203ENST00000542188 CCDC77Q9BR77 488 aa16.26■□□□□ 0.19
TRPM1-203ENST00000542188 DCAF8L1A6NGE4 600 aa16.26■□□□□ 0.19
TRPM1-203ENST00000542188 MTIF2P46199 727 aaKnown RBP16.26■□□□□ 0.19
TRPM1-203ENST00000542188 TPD52P55327 224 aaPredicted RBP16.26■□□□□ 0.19
TRPM1-203ENST00000542188 MICALL1Q8N3F8 863 aa16.26■□□□□ 0.19
TRPM1-203ENST00000542188 JADE2Q9NQC1 790 aa16.26■□□□□ 0.19
TRPM1-203ENST00000542188 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
TRPM1-203ENST00000542188 GTPBP4Q9BZE4 634 aaKnown RBP16.26■□□□□ 0.19
TRPM1-203ENST00000542188 SIL1Q9H173 461 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms