RNA–Protein interactions for RNA: ENST00000542174.5

CDK2AP1-205, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-205ENST00000542174 BECN1Q14457 450 aa18.55■□□□□ 0.56
CDK2AP1-205ENST00000542174 LMOD2Q6P5Q4 547 aa18.55■□□□□ 0.56
CDK2AP1-205ENST00000542174 TRPC5Q9UL62 973 aaPredicted RBP18.55■□□□□ 0.56
CDK2AP1-205ENST00000542174 NWD2Q9ULI1 1742 aa18.54■□□□□ 0.56
CDK2AP1-205ENST00000542174 BABAM1Q9NWV8 329 aa18.53■□□□□ 0.56
CDK2AP1-205ENST00000542174 SOS1Q07889 1333 aaPredicted RBP18.53■□□□□ 0.56
CDK2AP1-205ENST00000542174 NFAT5O94916 1531 aa18.53■□□□□ 0.56
CDK2AP1-205ENST00000542174 PLCH1Q4KWH8 1693 aa18.53■□□□□ 0.56
CDK2AP1-205ENST00000542174 UNC5CLQ8IV45 518 aa18.52■□□□□ 0.56
CDK2AP1-205ENST00000542174 SLC4A3P48751 1232 aa18.51■□□□□ 0.55
CDK2AP1-205ENST00000542174 SIRT2Q8IXJ6 389 aa18.51■□□□□ 0.55
CDK2AP1-205ENST00000542174 TSPYL4Q9UJ04 414 aa18.51■□□□□ 0.55
CDK2AP1-205ENST00000542174 GNAT3A8MTJ3 354 aa18.51■□□□□ 0.55
CDK2AP1-205ENST00000542174 DEKP35659 375 aaKnown RBP18.5■□□□□ 0.55
CDK2AP1-205ENST00000542174 KRT24Q2M2I5 525 aa18.5■□□□□ 0.55
CDK2AP1-205ENST00000542174 IP6K1Q92551 441 aa18.5■□□□□ 0.55
CDK2AP1-205ENST00000542174 LNPKQ9C0E8 428 aa18.5■□□□□ 0.55
CDK2AP1-205ENST00000542174 GLI3P10071 1580 aa18.49■□□□□ 0.55
CDK2AP1-205ENST00000542174 BMP2KLQ5H9B9 411 aa18.49■□□□□ 0.55
CDK2AP1-205ENST00000542174 KCNH5Q8NCM2 988 aa18.49■□□□□ 0.55
CDK2AP1-205ENST00000542174 N4BP2Q86UW6 1770 aaPredicted RBP18.49■□□□□ 0.55
CDK2AP1-205ENST00000542174 NRAPQ86VF7 1730 aa18.49■□□□□ 0.55
CDK2AP1-205ENST00000542174 FAM208AQ9UK61 1670 aaKnown RBP18.49■□□□□ 0.55
CDK2AP1-205ENST00000542174 MAP3K5Q99683 1374 aa18.49■□□□□ 0.55
CDK2AP1-205ENST00000542174 ANKRD45Q5TZF3 282 aa18.49■□□□□ 0.55
CDK2AP1-205ENST00000542174 NUTM2GQ5VZR2 741 aa18.49■□□□□ 0.55
CDK2AP1-205ENST00000542174 GJD4Q96KN9 370 aaPredicted RBP18.49■□□□□ 0.55
CDK2AP1-205ENST00000542174 C1orf115Q9H7X2 142 aa18.49■□□□□ 0.55
CDK2AP1-205ENST00000542174 PLEKHG5O94827 1062 aa18.48■□□□□ 0.55
CDK2AP1-205ENST00000542174 RPAP2Q8IXW5 612 aaPredicted RBP18.48■□□□□ 0.55
CDK2AP1-205ENST00000542174 COL14A1Q05707 1796 aaKnown RBP18.48■□□□□ 0.55
CDK2AP1-205ENST00000542174 ANKRD44Q8N8A2 993 aa18.47■□□□□ 0.55
CDK2AP1-205ENST00000542174 DCTPP1Q9H773 170 aa18.47■□□□□ 0.55
CDK2AP1-205ENST00000542174 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
CDK2AP1-205ENST00000542174 ATP10DQ9P241 1426 aa18.46■□□□□ 0.55
CDK2AP1-205ENST00000542174 VPS72Q15906 364 aa18.46■□□□□ 0.55
CDK2AP1-205ENST00000542174 SLIT3O75094 1523 aa18.45■□□□□ 0.54
CDK2AP1-205ENST00000542174 C22orf23Q9BZE7 217 aa18.45■□□□□ 0.54
CDK2AP1-205ENST00000542174 RGPD2P0DJD1 1756 aa18.45■□□□□ 0.54
CDK2AP1-205ENST00000542174 CCT4P50991 539 aaKnown RBP18.44■□□□□ 0.54
CDK2AP1-205ENST00000542174 MIS18AQ9NYP9 233 aa18.44■□□□□ 0.54
CDK2AP1-205ENST00000542174 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
CDK2AP1-205ENST00000542174 TAF7Q15545 349 aaPredicted RBP18.44■□□□□ 0.54
CDK2AP1-205ENST00000542174 CPDO75976 1380 aa18.43■□□□□ 0.54
CDK2AP1-205ENST00000542174 EIF5BO60841 1220 aaKnown RBP18.43■□□□□ 0.54
CDK2AP1-205ENST00000542174 NFKBIBQ15653 356 aa18.43■□□□□ 0.54
CDK2AP1-205ENST00000542174 CCDC30Q5VVM6 783 aa18.43■□□□□ 0.54
CDK2AP1-205ENST00000542174 IL17REQ8NFR9 667 aa18.43■□□□□ 0.54
CDK2AP1-205ENST00000542174 UPF1Q92900 1129 aaKnown RBP eCLIP18.43■□□□□ 0.54
CDK2AP1-205ENST00000542174 STK31Q9BXU1 1019 aa18.43■□□□□ 0.54
CDK2AP1-205ENST00000542174 ONECUT3O60422 494 aaPredicted RBP18.42■□□□□ 0.54
CDK2AP1-205ENST00000542174 BTG4Q9NY30 223 aa18.42■□□□□ 0.54
CDK2AP1-205ENST00000542174 KDM3BQ7LBC6 1761 aa18.41■□□□□ 0.54
CDK2AP1-205ENST00000542174 CEMIPQ8WUJ3 1361 aa18.41■□□□□ 0.54
CDK2AP1-205ENST00000542174 MFAP1P55081 439 aaKnown RBP18.41■□□□□ 0.54
CDK2AP1-205ENST00000542174 NCAPD2Q15021 1401 aa18.41■□□□□ 0.54
CDK2AP1-205ENST00000542174 CEP85Q6P2H3 762 aa18.41■□□□□ 0.54
CDK2AP1-205ENST00000542174 LTV1Q96GA3 475 aaPredicted RBP18.41■□□□□ 0.54
CDK2AP1-205ENST00000542174 RBM25P49756 843 aaKnown RBP18.4■□□□□ 0.54
CDK2AP1-205ENST00000542174 PRDM11Q9NQV5 511 aa18.4■□□□□ 0.54
CDK2AP1-205ENST00000542174 CAMTA1Q9Y6Y1 1673 aa18.4■□□□□ 0.54
CDK2AP1-205ENST00000542174 GCP02774 474 aa18.39■□□□□ 0.54
CDK2AP1-205ENST00000542174 TBC1D2Q9BYX2 928 aa18.39■□□□□ 0.54
CDK2AP1-205ENST00000542174 G2E3Q7L622 706 aa18.39■□□□□ 0.53
CDK2AP1-205ENST00000542174 CHMP4AQ9BY43 222 aa18.39■□□□□ 0.53
CDK2AP1-205ENST00000542174 PXDNLA1KZ92 1463 aa18.38■□□□□ 0.53
CDK2AP1-205ENST00000542174 HMMRO75330 724 aa18.38■□□□□ 0.53
CDK2AP1-205ENST00000542174 ZC3H6P61129 1189 aaKnown RBP18.38■□□□□ 0.53
CDK2AP1-205ENST00000542174 BRWD3Q6RI45 1802 aa18.38■□□□□ 0.53
CDK2AP1-205ENST00000542174 CHRNA2Q15822 529 aa18.37■□□□□ 0.53
CDK2AP1-205ENST00000542174 NBPF6Q5VWK0 638 aa18.37■□□□□ 0.53
CDK2AP1-205ENST00000542174 NBPF4Q96M43 638 aa18.37■□□□□ 0.53
CDK2AP1-205ENST00000542174 MEIS3Q99687 375 aa18.37■□□□□ 0.53
CDK2AP1-205ENST00000542174 ARHGEF25Q86VW2 580 aa18.37■□□□□ 0.53
CDK2AP1-205ENST00000542174 PLEKHM2Q8IWE5 1019 aa18.37■□□□□ 0.53
CDK2AP1-205ENST00000542174 FLIIQ13045 1269 aa18.36■□□□□ 0.53
CDK2AP1-205ENST00000542174 SPATA31A5Q5VU36 1347 aa18.36■□□□□ 0.53
CDK2AP1-205ENST00000542174 SPATA31A7Q8IWB4 1347 aa18.36■□□□□ 0.53
CDK2AP1-205ENST00000542174 OVOS2A0A0G2JMS6 1433 aa18.36■□□□□ 0.53
CDK2AP1-205ENST00000542174 HOXB7P09629 217 aa18.35■□□□□ 0.53
CDK2AP1-205ENST00000542174 ANTXR1Q9H6X2 564 aa18.35■□□□□ 0.53
CDK2AP1-205ENST00000542174 COL18A1P39060 1754 aa18.35■□□□□ 0.53
CDK2AP1-205ENST00000542174 AMOTQ4VCS5 1084 aa18.35■□□□□ 0.53
CDK2AP1-205ENST00000542174 PLEKHO1Q53GL0 409 aaPredicted RBP18.35■□□□□ 0.53
CDK2AP1-205ENST00000542174 USHBP1Q8N6Y0 703 aa18.35■□□□□ 0.53
CDK2AP1-205ENST00000542174 CDC45O75419 566 aa18.34■□□□□ 0.53
CDK2AP1-205ENST00000542174 GNAI3P08754 354 aa18.34■□□□□ 0.53
CDK2AP1-205ENST00000542174 GNAI2P04899 355 aa18.33■□□□□ 0.53
CDK2AP1-205ENST00000542174 AKAP4Q5JQC9 854 aa18.33■□□□□ 0.53
CDK2AP1-205ENST00000542174 SEPT12Q8IYM1 358 aa18.33■□□□□ 0.53
CDK2AP1-205ENST00000542174 SNX21Q969T3 373 aa18.33■□□□□ 0.53
CDK2AP1-205ENST00000542174 RGPD5Q99666 1765 aa18.33■□□□□ 0.53
CDK2AP1-205ENST00000542174 THSD7AQ9UPZ6 1657 aa18.33■□□□□ 0.52
CDK2AP1-205ENST00000542174 F6X3S4 739 aa18.33■□□□□ 0.52
CDK2AP1-205ENST00000542174 TTC22Q5TAA0 569 aa18.33■□□□□ 0.52
CDK2AP1-205ENST00000542174 SLC4A10Q6U841 1118 aa18.33■□□□□ 0.52
CDK2AP1-205ENST00000542174 TBC1D9Q6ZT07 1266 aa18.33■□□□□ 0.52
CDK2AP1-205ENST00000542174 FKBP5Q13451 457 aaPredicted RBP18.32■□□□□ 0.52
CDK2AP1-205ENST00000542174 SIPA1L3O60292 1781 aaPredicted RBP18.32■□□□□ 0.52
CDK2AP1-205ENST00000542174 SPATA31A1Q5TZJ5 1347 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms