RNA–Protein interactions for RNA: ENST00000542165.1

CWC15-203, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 1 (best)

Gene CWC15, Length 921 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-203ENST00000542165 PPP1R1BQ9UD71 204 aaPredicted RBP27.63■■■□□ 2.01
CWC15-203ENST00000542165 TAF1LQ8IZX4 1826 aa27.62■■■□□ 2.01
CWC15-203ENST00000542165 RNMTO43148 476 aaKnown RBP27.62■■■□□ 2.01
CWC15-203ENST00000542165 NEFMP07197 916 aa27.62■■■□□ 2.01
CWC15-203ENST00000542165 ATP6V1AP38606 617 aa27.62■■■□□ 2.01
CWC15-203ENST00000542165 FLAD1Q8NFF5 587 aa27.62■■■□□ 2.01
CWC15-203ENST00000542165 PDGFDQ9GZP0 370 aaPredicted RBP27.62■■■□□ 2.01
CWC15-203ENST00000542165 MAP3K5Q99683 1374 aa27.61■■■□□ 2.01
CWC15-203ENST00000542165 AK7Q96M32 723 aa27.61■■■□□ 2.01
CWC15-203ENST00000542165 SLC52A2Q9HAB3 445 aa27.61■■■□□ 2.01
CWC15-203ENST00000542165 PNPLA7Q6ZV29 1317 aa27.61■■■□□ 2.01
CWC15-203ENST00000542165 MYBBP1AQ9BQG0 1328 aaKnown RBP27.61■■■□□ 2.01
CWC15-203ENST00000542165 GNAT3A8MTJ3 354 aa27.6■■■□□ 2.01
CWC15-203ENST00000542165 MRC1P22897 1456 aa27.59■■■□□ 2.01
CWC15-203ENST00000542165 C4BP0C0L5 1744 aa27.59■■■□□ 2.01
CWC15-203ENST00000542165 RBM42Q9BTD8 480 aaKnown RBP27.59■■■□□ 2.01
CWC15-203ENST00000542165 PNNQ9H307 717 aaKnown RBP27.59■■■□□ 2.01
CWC15-203ENST00000542165 LGR6Q9HBX8 967 aa27.59■■■□□ 2.01
CWC15-203ENST00000542165 ZNF831Q5JPB2 1677 aa27.58■■■□□ 2.01
CWC15-203ENST00000542165 ADAMTS7Q9UKP4 1686 aa27.58■■■□□ 2.01
CWC15-203ENST00000542165 ATF5Q9Y2D1 282 aaPredicted RBP27.57■■■□□ 2
CWC15-203ENST00000542165 TUBGCP6Q96RT7 1819 aa27.57■■■□□ 2
CWC15-203ENST00000542165 VIRMAQ69YN4 1812 aaKnown RBP27.56■■■□□ 2
CWC15-203ENST00000542165 ZNF316A6NFI3 1004 aaPredicted RBP27.55■■■□□ 2
CWC15-203ENST00000542165 MSH5O43196 834 aa27.55■■■□□ 2
CWC15-203ENST00000542165 TEFQ10587 303 aa27.55■■■□□ 2
CWC15-203ENST00000542165 PHACTR3Q96KR7 559 aa27.55■■■□□ 2
CWC15-203ENST00000542165 LINC00116Q8NCU8 138 aa27.54■■■□□ 2
CWC15-203ENST00000542165 ITPK1Q13572 414 aa27.53■■■□□ 2
CWC15-203ENST00000542165 RTF1Q92541 710 aaKnown RBP27.53■■■□□ 2
CWC15-203ENST00000542165 PTCD1O75127 700 aaKnown RBP27.52■■■□□ 2
CWC15-203ENST00000542165 PTGER2P43116 358 aa27.52■■■□□ 2
CWC15-203ENST00000542165 SSFA2P28290 1259 aa27.51■■□□□ 1.99
CWC15-203ENST00000542165 POLD1P28340 1107 aa27.51■■□□□ 1.99
CWC15-203ENST00000542165 PRKRIP1Q9H875 184 aaPredicted RBP27.51■■□□□ 1.99
CWC15-203ENST00000542165 COL23A1Q86Y22 540 aaPredicted RBP27.5■■□□□ 1.99
CWC15-203ENST00000542165 GNPATO15228 680 aa27.49■■□□□ 1.99
CWC15-203ENST00000542165 TTC5Q8N0Z6 440 aa27.49■■□□□ 1.99
CWC15-203ENST00000542165 IL17REQ8NFR9 667 aa27.49■■□□□ 1.99
CWC15-203ENST00000542165 MAPK8IP3Q9UPT6 1336 aa27.48■■□□□ 1.99
CWC15-203ENST00000542165 HTATSF1O43719 755 aaKnown RBP27.48■■□□□ 1.99
CWC15-203ENST00000542165 RC3H1Q5TC82 1133 aaKnown RBP27.48■■□□□ 1.99
CWC15-203ENST00000542165 SLC4A9Q96Q91 983 aa27.48■■□□□ 1.99
CWC15-203ENST00000542165 CEMIPQ8WUJ3 1361 aa27.48■■□□□ 1.99
CWC15-203ENST00000542165 CNTNAP4Q9C0A0 1308 aa27.47■■□□□ 1.99
CWC15-203ENST00000542165 UBR3Q6ZT12 1888 aa27.47■■□□□ 1.99
CWC15-203ENST00000542165 SGIP1Q9BQI5 828 aa27.47■■□□□ 1.99
CWC15-203ENST00000542165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.46■■□□□ 1.99
CWC15-203ENST00000542165 PHF14O94880 888 aa27.46■■□□□ 1.99
CWC15-203ENST00000542165 RTCBQ9Y3I0 505 aaKnown RBP27.46■■□□□ 1.99
CWC15-203ENST00000542165 CICQ96RK0 1608 aaPredicted RBP27.45■■□□□ 1.99
CWC15-203ENST00000542165 COL5A3P25940 1745 aaPredicted RBP27.45■■□□□ 1.99
CWC15-203ENST00000542165 ARXQ96QS3 562 aa27.45■■□□□ 1.98
CWC15-203ENST00000542165 SLC39A6Q13433 755 aa27.44■■□□□ 1.98
CWC15-203ENST00000542165 VSIG10Q8N0Z9 540 aa27.44■■□□□ 1.98
CWC15-203ENST00000542165 ADRA2BP18089 450 aa27.43■■□□□ 1.98
CWC15-203ENST00000542165 WDR43Q15061 677 aaKnown RBP eCLIP27.43■■□□□ 1.98
CWC15-203ENST00000542165 PLEKHF1Q96S99 279 aa27.43■■□□□ 1.98
CWC15-203ENST00000542165 COL24A1Q17RW2 1714 aa27.42■■□□□ 1.98
CWC15-203ENST00000542165 SIPA1L3O60292 1781 aaPredicted RBP27.41■■□□□ 1.98
CWC15-203ENST00000542165 TRAPPC3LQ5T215 181 aa27.41■■□□□ 1.98
CWC15-203ENST00000542165 KCPQ6ZWJ8 1503 aa27.41■■□□□ 1.98
CWC15-203ENST00000542165 RPS6KA4O75676 772 aa27.4■■□□□ 1.98
CWC15-203ENST00000542165 NFE2L2Q16236 605 aa27.4■■□□□ 1.98
CWC15-203ENST00000542165 ZNF790Q6PG37 636 aa27.4■■□□□ 1.98
CWC15-203ENST00000542165 TJP1Q07157 1748 aa27.4■■□□□ 1.98
CWC15-203ENST00000542165 BTBD11A6QL63 1104 aa27.39■■□□□ 1.98
CWC15-203ENST00000542165 CRKLP46109 303 aaKnown RBP27.39■■□□□ 1.98
CWC15-203ENST00000542165 MCM10Q7L590 875 aa27.39■■□□□ 1.98
CWC15-203ENST00000542165 UBR2Q8IWV8 1755 aa27.39■■□□□ 1.98
CWC15-203ENST00000542165 DCAF8L1A6NGE4 600 aa27.38■■□□□ 1.97
CWC15-203ENST00000542165 AMIGO3Q86WK7 504 aa27.37■■□□□ 1.97
CWC15-203ENST00000542165 DNAJC10Q8IXB1 793 aa27.37■■□□□ 1.97
CWC15-203ENST00000542165 FMNL2Q96PY5 1086 aa27.37■■□□□ 1.97
CWC15-203ENST00000542165 TEX13AQ9BXU3 409 aaPredicted RBP27.37■■□□□ 1.97
CWC15-203ENST00000542165 MSL1Q68DK7 614 aa27.36■■□□□ 1.97
CWC15-203ENST00000542165 FHDC1Q9C0D6 1143 aaPredicted RBP27.36■■□□□ 1.97
CWC15-203ENST00000542165 RFC4P35249 363 aa27.35■■□□□ 1.97
CWC15-203ENST00000542165 CCDC87Q9NVE4 849 aa27.35■■□□□ 1.97
CWC15-203ENST00000542165 STARD3NLO95772 234 aa27.34■■□□□ 1.97
CWC15-203ENST00000542165 HEG1Q9ULI3 1381 aa27.34■■□□□ 1.97
CWC15-203ENST00000542165 CYP19A1P11511 503 aaPredicted RBP27.33■■□□□ 1.97
CWC15-203ENST00000542165 DCTN1Q14203 1278 aa27.33■■□□□ 1.97
CWC15-203ENST00000542165 SMIM5Q71RC9 77 aa27.33■■□□□ 1.97
CWC15-203ENST00000542165 ZNF496Q96IT1 587 aaPredicted RBP27.33■■□□□ 1.97
CWC15-203ENST00000542165 SYT17Q9BSW7 474 aa27.33■■□□□ 1.97
CWC15-203ENST00000542165 DLG5Q8TDM6 1919 aa27.33■■□□□ 1.97
CWC15-203ENST00000542165 MYH14Q7Z406 1995 aaKnown RBP27.33■■□□□ 1.97
CWC15-203ENST00000542165 LMOD3Q0VAK6 560 aa27.32■■□□□ 1.96
CWC15-203ENST00000542165 TAF7Q15545 349 aaPredicted RBP27.32■■□□□ 1.96
CWC15-203ENST00000542165 PNISRQ8TF01 805 aaKnown RBP27.32■■□□□ 1.96
CWC15-203ENST00000542165 ARHGEF1Q92888 912 aaKnown RBP27.32■■□□□ 1.96
CWC15-203ENST00000542165 ANP32CO43423 234 aa27.31■■□□□ 1.96
CWC15-203ENST00000542165 INTS5Q6P9B9 1019 aaKnown RBP27.3■■□□□ 1.96
CWC15-203ENST00000542165 KLHL34Q8N239 644 aa27.3■■□□□ 1.96
CWC15-203ENST00000542165 NLGN1Q8N2Q7 840 aa27.3■■□□□ 1.96
CWC15-203ENST00000542165 RUNDC1Q96C34 613 aa27.3■■□□□ 1.96
CWC15-203ENST00000542165 RIPK4P57078 832 aa27.28■■□□□ 1.96
CWC15-203ENST00000542165 ADAMTS8Q9UP79 889 aa27.27■■□□□ 1.96
CWC15-203ENST00000542165 SOS1Q07889 1333 aaPredicted RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms