RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 OVOS2A0A0G2JMS6 1433 aa13.51□□□□□ -0.25
NECAP1-206ENST00000542095 FKBP5Q13451 457 aaPredicted RBP13.51□□□□□ -0.25
NECAP1-206ENST00000542095 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
NECAP1-206ENST00000542095 C22orf23Q9BZE7 217 aa13.51□□□□□ -0.25
NECAP1-206ENST00000542095 HMMRO75330 724 aa13.5□□□□□ -0.25
NECAP1-206ENST00000542095 C1orf141Q5JVX7 400 aa13.5□□□□□ -0.25
NECAP1-206ENST00000542095 LGR6Q9HBX8 967 aa13.5□□□□□ -0.25
NECAP1-206ENST00000542095 HOXB7P09629 217 aa13.5□□□□□ -0.25
NECAP1-206ENST00000542095 TEFQ10587 303 aa13.5□□□□□ -0.25
NECAP1-206ENST00000542095 HDGFL1Q5TGJ6 251 aa13.5□□□□□ -0.25
NECAP1-206ENST00000542095 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
NECAP1-206ENST00000542095 SIPA1L3O60292 1781 aaPredicted RBP13.49□□□□□ -0.25
NECAP1-206ENST00000542095 CADPS2Q86UW7 1296 aa13.49□□□□□ -0.25
NECAP1-206ENST00000542095 CRYBG1Q9Y4K1 1723 aa13.49□□□□□ -0.25
NECAP1-206ENST00000542095 XIRP1Q702N8 1843 aaKnown RBP13.48□□□□□ -0.25
NECAP1-206ENST00000542095 PXDNQ92626 1479 aa13.48□□□□□ -0.25
NECAP1-206ENST00000542095 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
NECAP1-206ENST00000542095 GNAI2P04899 355 aa13.48□□□□□ -0.25
NECAP1-206ENST00000542095 GNAI3P08754 354 aa13.48□□□□□ -0.25
NECAP1-206ENST00000542095 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
NECAP1-206ENST00000542095 AXIN2Q9Y2T1 843 aa13.48□□□□□ -0.25
NECAP1-206ENST00000542095 NPHP3Q7Z494 1330 aa13.48□□□□□ -0.25
NECAP1-206ENST00000542095 RNMTO43148 476 aaKnown RBP13.47□□□□□ -0.25
NECAP1-206ENST00000542095 COL18A1P39060 1754 aa13.47□□□□□ -0.25
NECAP1-206ENST00000542095 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
NECAP1-206ENST00000542095 ERBB3P21860 1342 aa13.47□□□□□ -0.25
NECAP1-206ENST00000542095 BTBD11A6QL63 1104 aa13.47□□□□□ -0.25
NECAP1-206ENST00000542095 MPRIPQ6WCQ1 1025 aa13.47□□□□□ -0.25
NECAP1-206ENST00000542095 PLEKHM2Q8IWE5 1019 aa13.47□□□□□ -0.25
NECAP1-206ENST00000542095 ZC3H6P61129 1189 aaKnown RBP13.46□□□□□ -0.25
NECAP1-206ENST00000542095 ABCC6O95255 1503 aa13.46□□□□□ -0.25
NECAP1-206ENST00000542095 TNS3Q68CZ2 1445 aa13.46□□□□□ -0.25
NECAP1-206ENST00000542095 SCN11AQ9UI33 1791 aa13.45□□□□□ -0.26
NECAP1-206ENST00000542095 EIF5BO60841 1220 aaKnown RBP13.45□□□□□ -0.26
NECAP1-206ENST00000542095 EIF2S2P20042 333 aaKnown RBP13.45□□□□□ -0.26
NECAP1-206ENST00000542095 CDC45O75419 566 aa13.44□□□□□ -0.26
NECAP1-206ENST00000542095 RBM25P49756 843 aaKnown RBP13.44□□□□□ -0.26
NECAP1-206ENST00000542095 HSPA2P54652 639 aa13.44□□□□□ -0.26
NECAP1-206ENST00000542095 TTC22Q5TAA0 569 aa13.44□□□□□ -0.26
NECAP1-206ENST00000542095 DDX17Q92841 729 aaKnown RBP13.44□□□□□ -0.26
NECAP1-206ENST00000542095 TBC1D2Q9BYX2 928 aa13.44□□□□□ -0.26
NECAP1-206ENST00000542095 TBC1D9Q6ZT07 1266 aa13.44□□□□□ -0.26
NECAP1-206ENST00000542095 KCNQ3O43525 872 aa13.43□□□□□ -0.26
NECAP1-206ENST00000542095 GSPT1P15170 499 aaKnown RBP13.43□□□□□ -0.26
NECAP1-206ENST00000542095 NFKBIBQ15653 356 aa13.43□□□□□ -0.26
NECAP1-206ENST00000542095 RAPGEF4Q8WZA2 1011 aa13.43□□□□□ -0.26
NECAP1-206ENST00000542095 PHAXQ9H814 394 aaKnown RBP13.43□□□□□ -0.26
NECAP1-206ENST00000542095 C16orf71Q8IYS4 520 aaPredicted RBP13.43□□□□□ -0.26
NECAP1-206ENST00000542095 STRCQ7RTU9 1775 aa13.42□□□□□ -0.26
NECAP1-206ENST00000542095 APBB1O00213 710 aa13.42□□□□□ -0.26
NECAP1-206ENST00000542095 SMARCA5O60264 1052 aaPredicted RBP13.42□□□□□ -0.26
NECAP1-206ENST00000542095 CHPF2Q9P2E5 772 aa13.42□□□□□ -0.26
NECAP1-206ENST00000542095 ATP8B2P98198 1209 aa13.42□□□□□ -0.26
NECAP1-206ENST00000542095 NLRP2Q9NX02 1062 aa13.42□□□□□ -0.26
NECAP1-206ENST00000542095 PLEKHG2Q9H7P9 1386 aa13.41□□□□□ -0.26
NECAP1-206ENST00000542095 SPATA31A3Q5VYP0 1347 aa13.41□□□□□ -0.26
NECAP1-206ENST00000542095 UBTFL1P0CB47 393 aaPredicted RBP13.41□□□□□ -0.26
NECAP1-206ENST00000542095 TATP17735 454 aaPredicted RBP13.41□□□□□ -0.26
NECAP1-206ENST00000542095 SRCIN1Q9C0H9 1055 aa13.41□□□□□ -0.26
NECAP1-206ENST00000542095 BCL11AQ9H165 835 aa13.41□□□□□ -0.26
NECAP1-206ENST00000542095 DEKP35659 375 aaKnown RBP13.4□□□□□ -0.26
NECAP1-206ENST00000542095 USP44Q9H0E7 712 aa13.4□□□□□ -0.26
NECAP1-206ENST00000542095 DBF4Q9UBU7 674 aaPredicted RBP13.4□□□□□ -0.26
NECAP1-206ENST00000542095 HEG1Q9ULI3 1381 aa13.4□□□□□ -0.26
NECAP1-206ENST00000542095 PKD1L3Q7Z443 1732 aa13.4□□□□□ -0.26
NECAP1-206ENST00000542095 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
NECAP1-206ENST00000542095 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
NECAP1-206ENST00000542095 GIGYF1O75420 1035 aaPredicted RBP13.39□□□□□ -0.27
NECAP1-206ENST00000542095 CSB-PGBD3P0DP91 1061 aa13.39□□□□□ -0.27
NECAP1-206ENST00000542095 HSCBQ8IWL3 235 aa13.39□□□□□ -0.27
NECAP1-206ENST00000542095 OTUD7AQ8TE49 926 aaPredicted RBP13.39□□□□□ -0.27
NECAP1-206ENST00000542095 DNAAF4Q8WXU2 420 aa13.39□□□□□ -0.27
NECAP1-206ENST00000542095 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.39□□□□□ -0.27
NECAP1-206ENST00000542095 TUBGCP6Q96RT7 1819 aa13.39□□□□□ -0.27
NECAP1-206ENST00000542095 CABLES1Q8TDN4 633 aa13.39□□□□□ -0.27
NECAP1-206ENST00000542095 SLKQ9H2G2 1235 aaPredicted RBP13.39□□□□□ -0.27
NECAP1-206ENST00000542095 CPDO75976 1380 aa13.39□□□□□ -0.27
NECAP1-206ENST00000542095 PNMA6EA0A0J9YXQ4 647 aa13.38□□□□□ -0.27
NECAP1-206ENST00000542095 CASC1Q6TDU7 716 aa13.38□□□□□ -0.27
NECAP1-206ENST00000542095 LRRCC1Q9C099 1032 aa13.38□□□□□ -0.27
NECAP1-206ENST00000542095 OSBPL3Q9H4L5 887 aa13.38□□□□□ -0.27
NECAP1-206ENST00000542095 EXOC6BQ9Y2D4 811 aa13.38□□□□□ -0.27
NECAP1-206ENST00000542095 MEGF6O75095 1541 aa13.38□□□□□ -0.27
NECAP1-206ENST00000542095 PI4KAP2A4QPH2 592 aa13.38□□□□□ -0.27
NECAP1-206ENST00000542095 PI4KAP1Q8N8J0 262 aa13.38□□□□□ -0.27
NECAP1-206ENST00000542095 IBTKQ9P2D0 1353 aaPredicted RBP13.38□□□□□ -0.27
NECAP1-206ENST00000542095 BEND3Q5T5X7 828 aa13.37□□□□□ -0.27
NECAP1-206ENST00000542095 SNX21Q969T3 373 aa13.37□□□□□ -0.27
NECAP1-206ENST00000542095 ANTXR1Q9H6X2 564 aa13.37□□□□□ -0.27
NECAP1-206ENST00000542095 C5P01031 1676 aa13.37□□□□□ -0.27
NECAP1-206ENST00000542095 KDM6AO15550 1401 aaPredicted RBP13.37□□□□□ -0.27
NECAP1-206ENST00000542095 PHKG2P15735 406 aa13.37□□□□□ -0.27
NECAP1-206ENST00000542095 SDSP20132 328 aa13.37□□□□□ -0.27
NECAP1-206ENST00000542095 BRINP3Q76B58 766 aa13.37□□□□□ -0.27
NECAP1-206ENST00000542095 ADCY9O60503 1353 aa13.37□□□□□ -0.27
NECAP1-206ENST00000542095 PDE1AP54750 535 aa13.36□□□□□ -0.27
NECAP1-206ENST00000542095 CHRNA2Q15822 529 aa13.36□□□□□ -0.27
NECAP1-206ENST00000542095 IFNL2Q8IZJ0 200 aa13.36□□□□□ -0.27
NECAP1-206ENST00000542095 SLC52A2Q9HAB3 445 aa13.36□□□□□ -0.27
NECAP1-206ENST00000542095 PARP4Q9UKK3 1724 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms