RNA–Protein interactions for RNA: ENST00000542064.1

AP000439.2-201, humanhuman

TSL 2 BASIC

Gene AP000439.2, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.2-201ENST00000542064 SIK1P57059 783 aa17.27■□□□□ 0.36
AP000439.2-201ENST00000542064 DDX10Q13206 875 aaKnown RBP17.27■□□□□ 0.36
AP000439.2-201ENST00000542064 MSL1Q68DK7 614 aa17.27■□□□□ 0.36
AP000439.2-201ENST00000542064 DCAF5Q96JK2 942 aa17.27■□□□□ 0.36
AP000439.2-201ENST00000542064 PHACTR3Q96KR7 559 aa17.27■□□□□ 0.36
AP000439.2-201ENST00000542064 TFCP2L1Q9NZI6 479 aa17.27■□□□□ 0.36
AP000439.2-201ENST00000542064 KCPQ6ZWJ8 1503 aa17.26■□□□□ 0.35
AP000439.2-201ENST00000542064 ZNF831Q5JPB2 1677 aa17.26■□□□□ 0.35
AP000439.2-201ENST00000542064 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
AP000439.2-201ENST00000542064 RSPH6AQ9H0K4 717 aa17.26■□□□□ 0.35
AP000439.2-201ENST00000542064 DLG5Q8TDM6 1919 aa17.25■□□□□ 0.35
AP000439.2-201ENST00000542064 AMOTQ4VCS5 1084 aa17.25■□□□□ 0.35
AP000439.2-201ENST00000542064 CICQ96RK0 1608 aaPredicted RBP17.25■□□□□ 0.35
AP000439.2-201ENST00000542064 RNMTO43148 476 aaKnown RBP17.24■□□□□ 0.35
AP000439.2-201ENST00000542064 PHF14O94880 888 aa17.24■□□□□ 0.35
AP000439.2-201ENST00000542064 NFATC2IPQ8NCF5 419 aa17.24■□□□□ 0.35
AP000439.2-201ENST00000542064 MTFR1LQ9H019 292 aa17.24■□□□□ 0.35
AP000439.2-201ENST00000542064 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
AP000439.2-201ENST00000542064 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
AP000439.2-201ENST00000542064 CABP4P57796 275 aa17.23■□□□□ 0.35
AP000439.2-201ENST00000542064 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
AP000439.2-201ENST00000542064 C1orf141Q5JVX7 400 aa17.23■□□□□ 0.35
AP000439.2-201ENST00000542064 ATP6V1AP38606 617 aa17.22■□□□□ 0.35
AP000439.2-201ENST00000542064 AKAP4Q5JQC9 854 aa17.22■□□□□ 0.35
AP000439.2-201ENST00000542064 SMARCC1Q92922 1105 aaPredicted RBP17.22■□□□□ 0.35
AP000439.2-201ENST00000542064 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
AP000439.2-201ENST00000542064 FHDC1Q9C0D6 1143 aaPredicted RBP17.22■□□□□ 0.35
AP000439.2-201ENST00000542064 PPP1R1BQ9UD71 204 aaPredicted RBP17.22■□□□□ 0.35
AP000439.2-201ENST00000542064 PTCD1O75127 700 aaKnown RBP17.21■□□□□ 0.35
AP000439.2-201ENST00000542064 MSH5O43196 834 aa17.2■□□□□ 0.34
AP000439.2-201ENST00000542064 IL17REQ8NFR9 667 aa17.2■□□□□ 0.34
AP000439.2-201ENST00000542064 SLC52A2Q9HAB3 445 aa17.2■□□□□ 0.34
AP000439.2-201ENST00000542064 MAP3K5Q99683 1374 aa17.19■□□□□ 0.34
AP000439.2-201ENST00000542064 HSP90AB1P08238 724 aaKnown RBP17.19■□□□□ 0.34
AP000439.2-201ENST00000542064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.18■□□□□ 0.34
AP000439.2-201ENST00000542064 GNPATO15228 680 aa17.18■□□□□ 0.34
AP000439.2-201ENST00000542064 U2AF1L5P0DN76 240 aaPredicted RBP17.18■□□□□ 0.34
AP000439.2-201ENST00000542064 U2AF1Q01081 240 aaKnown RBP eCLIP17.18■□□□□ 0.34
AP000439.2-201ENST00000542064 AK7Q96M32 723 aa17.18■□□□□ 0.34
AP000439.2-201ENST00000542064 UTRNP46939 3433 aa17.18■□□□□ 0.34
AP000439.2-201ENST00000542064 KCNQ3O43525 872 aa17.17■□□□□ 0.34
AP000439.2-201ENST00000542064 NLGN2Q8NFZ4 835 aa17.17■□□□□ 0.34
AP000439.2-201ENST00000542064 ARXQ96QS3 562 aa17.17■□□□□ 0.34
AP000439.2-201ENST00000542064 GOLGB1Q14789 3259 aaKnown RBP17.17■□□□□ 0.34
AP000439.2-201ENST00000542064 KIAA1551Q9HCM1 1747 aa17.16■□□□□ 0.34
AP000439.2-201ENST00000542064 DCTN1Q14203 1278 aa17.16■□□□□ 0.34
AP000439.2-201ENST00000542064 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
AP000439.2-201ENST00000542064 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
AP000439.2-201ENST00000542064 SYT17Q9BSW7 474 aa17.16■□□□□ 0.34
AP000439.2-201ENST00000542064 KLHL34Q8N239 644 aa17.15■□□□□ 0.34
AP000439.2-201ENST00000542064 MCM10Q7L590 875 aa17.14■□□□□ 0.33
AP000439.2-201ENST00000542064 CEMIPQ8WUJ3 1361 aa17.14■□□□□ 0.33
AP000439.2-201ENST00000542064 CRKLP46109 303 aaKnown RBP17.12■□□□□ 0.33
AP000439.2-201ENST00000542064 INTS5Q6P9B9 1019 aaKnown RBP17.12■□□□□ 0.33
AP000439.2-201ENST00000542064 SLC16A10Q8TF71 515 aa17.12■□□□□ 0.33
AP000439.2-201ENST00000542064 PLEKHF1Q96S99 279 aa17.12■□□□□ 0.33
AP000439.2-201ENST00000542064 SRP68Q9UHB9 627 aaKnown RBP17.12■□□□□ 0.33
AP000439.2-201ENST00000542064 CNTNAP4Q9C0A0 1308 aa17.12■□□□□ 0.33
AP000439.2-201ENST00000542064 KDM3BQ7LBC6 1761 aa17.11■□□□□ 0.33
AP000439.2-201ENST00000542064 GNAT3A8MTJ3 354 aa17.11■□□□□ 0.33
AP000439.2-201ENST00000542064 ZEB1P37275 1124 aaPredicted RBP17.11■□□□□ 0.33
AP000439.2-201ENST00000542064 THUMPD2Q9BTF0 503 aaKnown RBP17.11■□□□□ 0.33
AP000439.2-201ENST00000542064 PRAMEF22A3QJZ6 481 aa17.1■□□□□ 0.33
AP000439.2-201ENST00000542064 SSFA2P28290 1259 aa17.1■□□□□ 0.33
AP000439.2-201ENST00000542064 GAS2L2Q8NHY3 880 aa17.1■□□□□ 0.33
AP000439.2-201ENST00000542064 ARHGEF1Q92888 912 aaKnown RBP17.1■□□□□ 0.33
AP000439.2-201ENST00000542064 ZNF496Q96IT1 587 aaPredicted RBP17.1■□□□□ 0.33
AP000439.2-201ENST00000542064 N4BP2Q86UW6 1770 aaPredicted RBP17.1■□□□□ 0.33
AP000439.2-201ENST00000542064 WWC3Q9ULE0 1092 aa17.09■□□□□ 0.33
AP000439.2-201ENST00000542064 CYP19A1P11511 503 aaPredicted RBP17.08■□□□□ 0.32
AP000439.2-201ENST00000542064 CCDC184Q52MB2 194 aa17.08■□□□□ 0.32
AP000439.2-201ENST00000542064 NUDCQ9Y266 331 aa17.08■□□□□ 0.32
AP000439.2-201ENST00000542064 ZBTB1Q9Y2K1 713 aa17.08■□□□□ 0.32
AP000439.2-201ENST00000542064 KIF13BQ9NQT8 1826 aa17.07■□□□□ 0.32
AP000439.2-201ENST00000542064 FCHSD2O94868 740 aa17.07■□□□□ 0.32
AP000439.2-201ENST00000542064 POLD1P28340 1107 aa17.07■□□□□ 0.32
AP000439.2-201ENST00000542064 MIS18AQ9NYP9 233 aa17.07■□□□□ 0.32
AP000439.2-201ENST00000542064 SOS1Q07889 1333 aaPredicted RBP17.06■□□□□ 0.32
AP000439.2-201ENST00000542064 MYBBP1AQ9BQG0 1328 aaKnown RBP17.06■□□□□ 0.32
AP000439.2-201ENST00000542064 RPS6KA4O75676 772 aa17.06■□□□□ 0.32
AP000439.2-201ENST00000542064 PIP4K2AP48426 406 aaPredicted RBP17.06■□□□□ 0.32
AP000439.2-201ENST00000542064 RC3H1Q5TC82 1133 aaKnown RBP17.06■□□□□ 0.32
AP000439.2-201ENST00000542064 CCDC146Q8IYE0 955 aa17.06■□□□□ 0.32
AP000439.2-201ENST00000542064 RTCBQ9Y3I0 505 aaKnown RBP17.06■□□□□ 0.32
AP000439.2-201ENST00000542064 SCN7AQ01118 1682 aa17.06■□□□□ 0.32
AP000439.2-201ENST00000542064 AFDNP55196 1824 aaKnown RBP17.05■□□□□ 0.32
AP000439.2-201ENST00000542064 GYS1P13807 737 aa17.05■□□□□ 0.32
AP000439.2-201ENST00000542064 RALBP1Q15311 655 aa17.05■□□□□ 0.32
AP000439.2-201ENST00000542064 PRKRIP1Q9H875 184 aaPredicted RBP17.05■□□□□ 0.32
AP000439.2-201ENST00000542064 HEG1Q9ULI3 1381 aa17.04■□□□□ 0.32
AP000439.2-201ENST00000542064 MMP10P09238 476 aa17.04■□□□□ 0.32
AP000439.2-201ENST00000542064 YBX3P16989 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
AP000439.2-201ENST00000542064 ZNF790Q6PG37 636 aa17.04■□□□□ 0.32
AP000439.2-201ENST00000542064 CCDC87Q9NVE4 849 aa17.04■□□□□ 0.32
AP000439.2-201ENST00000542064 LAMB4A4D0S4 1761 aa17.04■□□□□ 0.32
AP000439.2-201ENST00000542064 BCORQ6W2J9 1755 aa17.03■□□□□ 0.32
AP000439.2-201ENST00000542064 DDR1Q08345 913 aa17.03■□□□□ 0.32
AP000439.2-201ENST00000542064 TEFQ10587 303 aa17.03■□□□□ 0.32
AP000439.2-201ENST00000542064 FKBP8Q14318 412 aa17.03■□□□□ 0.32
AP000439.2-201ENST00000542064 TRAPPC3LQ5T215 181 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms