RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 NEUROD2Q15784 382 aa27.57■■■□□ 2
MSRB3-211ENST00000541897 LGR6Q9HBX8 967 aa27.57■■■□□ 2
MSRB3-211ENST00000541897 DOT1LQ8TEK3 1739 aa27.57■■■□□ 2
MSRB3-211ENST00000541897 NHSQ6T4R5 1651 aa27.56■■■□□ 2
MSRB3-211ENST00000541897 MCM10Q7L590 875 aa27.54■■■□□ 2
MSRB3-211ENST00000541897 PROM2Q8N271 834 aa27.54■■■□□ 2
MSRB3-211ENST00000541897 PRIM1P49642 420 aaKnown RBP27.53■■■□□ 2
MSRB3-211ENST00000541897 SLC52A2Q9HAB3 445 aa27.53■■■□□ 2
MSRB3-211ENST00000541897 ANO8Q9HCE9 1232 aaPredicted RBP27.53■■■□□ 2
MSRB3-211ENST00000541897 VIRMAQ69YN4 1812 aaKnown RBP27.53■■■□□ 2
MSRB3-211ENST00000541897 CABP4P57796 275 aa27.52■■■□□ 2
MSRB3-211ENST00000541897 TEFQ10587 303 aa27.52■■■□□ 2
MSRB3-211ENST00000541897 CALD1Q05682 793 aaKnown RBP27.51■■□□□ 1.99
MSRB3-211ENST00000541897 DCTN1Q14203 1278 aa27.51■■□□□ 1.99
MSRB3-211ENST00000541897 WWC1Q8IX03 1113 aa27.51■■□□□ 1.99
MSRB3-211ENST00000541897 ACSBG1Q96GR2 724 aa27.51■■□□□ 1.99
MSRB3-211ENST00000541897 TMOD3Q9NYL9 352 aa27.51■■□□□ 1.99
MSRB3-211ENST00000541897 ITGB4P16144 1822 aa27.5■■□□□ 1.99
MSRB3-211ENST00000541897 KCNQ2O43526 872 aa27.49■■□□□ 1.99
MSRB3-211ENST00000541897 NFATC2IPQ8NCF5 419 aa27.49■■□□□ 1.99
MSRB3-211ENST00000541897 SPON1Q9HCB6 807 aa27.49■■□□□ 1.99
MSRB3-211ENST00000541897 SIPA1L3O60292 1781 aaPredicted RBP27.49■■□□□ 1.99
MSRB3-211ENST00000541897 PIGBQ92521 554 aa27.48■■□□□ 1.99
MSRB3-211ENST00000541897 BABAM1Q9NWV8 329 aa27.48■■□□□ 1.99
MSRB3-211ENST00000541897 TAF7Q15545 349 aaPredicted RBP27.47■■□□□ 1.99
MSRB3-211ENST00000541897 WDR63Q8IWG1 891 aa27.47■■□□□ 1.99
MSRB3-211ENST00000541897 SYTL4Q96C24 671 aaPredicted RBP27.47■■□□□ 1.99
MSRB3-211ENST00000541897 ZNF521Q96K83 1311 aa27.46■■□□□ 1.99
MSRB3-211ENST00000541897 CASZ1Q86V15 1759 aa27.46■■□□□ 1.99
MSRB3-211ENST00000541897 TXNRD1Q16881 649 aa27.46■■□□□ 1.99
MSRB3-211ENST00000541897 THUMPD2Q9BTF0 503 aaKnown RBP27.46■■□□□ 1.99
MSRB3-211ENST00000541897 PDGFDQ9GZP0 370 aaPredicted RBP27.46■■□□□ 1.99
MSRB3-211ENST00000541897 IL16Q14005 1332 aa27.45■■□□□ 1.99
MSRB3-211ENST00000541897 PPP1R1BQ9UD71 204 aaPredicted RBP27.45■■□□□ 1.98
MSRB3-211ENST00000541897 HNRNPUQ00839 825 aaKnown RBP eCLIP27.43■■□□□ 1.98
MSRB3-211ENST00000541897 BTAF1O14981 1849 aa27.42■■□□□ 1.98
MSRB3-211ENST00000541897 CFAP44Q96MT7 982 aa27.42■■□□□ 1.98
MSRB3-211ENST00000541897 SALL2Q9Y467 1007 aaPredicted RBP27.42■■□□□ 1.98
MSRB3-211ENST00000541897 PAPPAQ13219 1627 aa27.41■■□□□ 1.98
MSRB3-211ENST00000541897 BTBD11A6QL63 1104 aa27.41■■□□□ 1.98
MSRB3-211ENST00000541897 SMARCC1Q92922 1105 aaPredicted RBP27.41■■□□□ 1.98
MSRB3-211ENST00000541897 IFT57Q9NWB7 429 aa27.41■■□□□ 1.98
MSRB3-211ENST00000541897 SENP3-EIF4A1A0A087X0R7 540 aa27.4■■□□□ 1.98
MSRB3-211ENST00000541897 CHL1O00533 1208 aa27.4■■□□□ 1.98
MSRB3-211ENST00000541897 ZNF853P0CG23 659 aa27.4■■□□□ 1.98
MSRB3-211ENST00000541897 GNAI1P63096 354 aa27.4■■□□□ 1.98
MSRB3-211ENST00000541897 ATG3Q9NT62 314 aa27.39■■□□□ 1.98
MSRB3-211ENST00000541897 ZBTB7AO95365 584 aa27.38■■□□□ 1.97
MSRB3-211ENST00000541897 ZNF790Q6PG37 636 aa27.38■■□□□ 1.97
MSRB3-211ENST00000541897 STK32BQ9NY57 414 aa27.38■■□□□ 1.97
MSRB3-211ENST00000541897 ZBED9Q6R2W3 1325 aa27.38■■□□□ 1.97
MSRB3-211ENST00000541897 ASAP1Q9ULH1 1129 aa27.37■■□□□ 1.97
MSRB3-211ENST00000541897 SLC15A2Q16348 729 aa27.36■■□□□ 1.97
MSRB3-211ENST00000541897 PALLDQ8WX93 1383 aa27.35■■□□□ 1.97
MSRB3-211ENST00000541897 KDM3BQ7LBC6 1761 aa27.35■■□□□ 1.97
MSRB3-211ENST00000541897 GOLGA2Q08379 1002 aa27.35■■□□□ 1.97
MSRB3-211ENST00000541897 TSPYL4Q9UJ04 414 aa27.35■■□□□ 1.97
MSRB3-211ENST00000541897 TTC5Q8N0Z6 440 aa27.34■■□□□ 1.97
MSRB3-211ENST00000541897 ATF5Q9Y2D1 282 aaPredicted RBP27.34■■□□□ 1.97
MSRB3-211ENST00000541897 UBR2Q8IWV8 1755 aa27.34■■□□□ 1.97
MSRB3-211ENST00000541897 KCPQ6ZWJ8 1503 aa27.32■■□□□ 1.96
MSRB3-211ENST00000541897 SLC39A6Q13433 755 aa27.32■■□□□ 1.96
MSRB3-211ENST00000541897 ZNF831Q5JPB2 1677 aa27.32■■□□□ 1.96
MSRB3-211ENST00000541897 LY75O60449 1722 aa27.32■■□□□ 1.96
MSRB3-211ENST00000541897 VSIG10Q8N0Z9 540 aa27.31■■□□□ 1.96
MSRB3-211ENST00000541897 MIS18AQ9NYP9 233 aa27.31■■□□□ 1.96
MSRB3-211ENST00000541897 E9PSI1 815 aa27.3■■□□□ 1.96
MSRB3-211ENST00000541897 HMGB2P26583 209 aaKnown RBP27.3■■□□□ 1.96
MSRB3-211ENST00000541897 MYH16Q9H6N6 1097 aa27.3■■□□□ 1.96
MSRB3-211ENST00000541897 MBIPQ9NS73 344 aa27.3■■□□□ 1.96
MSRB3-211ENST00000541897 LAS1LQ9Y4W2 734 aaKnown RBP27.3■■□□□ 1.96
MSRB3-211ENST00000541897 PTGER2P43116 358 aa27.29■■□□□ 1.96
MSRB3-211ENST00000541897 FMNL2Q96PY5 1086 aa27.29■■□□□ 1.96
MSRB3-211ENST00000541897 CICQ96RK0 1608 aaPredicted RBP27.29■■□□□ 1.96
MSRB3-211ENST00000541897 HEG1Q9ULI3 1381 aa27.28■■□□□ 1.96
MSRB3-211ENST00000541897 LOC102724428A0A0B4J2F2 783 aa27.28■■□□□ 1.96
MSRB3-211ENST00000541897 KCNQ3O43525 872 aa27.28■■□□□ 1.96
MSRB3-211ENST00000541897 SIK1P57059 783 aa27.28■■□□□ 1.96
MSRB3-211ENST00000541897 EIF4A1P60842 406 aaKnown RBP27.28■■□□□ 1.96
MSRB3-211ENST00000541897 SLC27A3Q5K4L6 730 aa27.28■■□□□ 1.96
MSRB3-211ENST00000541897 SLFN5Q08AF3 891 aa27.27■■□□□ 1.96
MSRB3-211ENST00000541897 ZNF496Q96IT1 587 aaPredicted RBP27.27■■□□□ 1.96
MSRB3-211ENST00000541897 SPINK5Q9NQ38 1064 aaPredicted RBP27.27■■□□□ 1.96
MSRB3-211ENST00000541897 TRMT2AQ8IZ69 625 aaKnown RBP27.26■■□□□ 1.95
MSRB3-211ENST00000541897 LRRC4BQ9NT99 713 aa27.26■■□□□ 1.95
MSRB3-211ENST00000541897 PTCD1O75127 700 aaKnown RBP27.25■■□□□ 1.95
MSRB3-211ENST00000541897 FANCIQ9NVI1 1328 aa27.24■■□□□ 1.95
MSRB3-211ENST00000541897 RBM42Q9BTD8 480 aaKnown RBP27.24■■□□□ 1.95
MSRB3-211ENST00000541897 SOS1Q07889 1333 aaPredicted RBP27.23■■□□□ 1.95
MSRB3-211ENST00000541897 DCAF8L1A6NGE4 600 aa27.23■■□□□ 1.95
MSRB3-211ENST00000541897 YY1P25490 414 aa27.23■■□□□ 1.95
MSRB3-211ENST00000541897 ZNF827Q17R98 1081 aa27.23■■□□□ 1.95
MSRB3-211ENST00000541897 SLC4A9Q96Q91 983 aa27.23■■□□□ 1.95
MSRB3-211ENST00000541897 TEX13AQ9BXU3 409 aaPredicted RBP27.23■■□□□ 1.95
MSRB3-211ENST00000541897 HOXB7P09629 217 aa27.22■■□□□ 1.95
MSRB3-211ENST00000541897 SNRPA1P09661 255 aaKnown RBP27.22■■□□□ 1.95
MSRB3-211ENST00000541897 TSR2Q969E8 191 aaKnown RBP27.22■■□□□ 1.95
MSRB3-211ENST00000541897 MTFR1LQ9H019 292 aa27.22■■□□□ 1.95
MSRB3-211ENST00000541897 CCNL1Q9UK58 526 aaPredicted RBP27.22■■□□□ 1.95
MSRB3-211ENST00000541897 ATP6V1AP38606 617 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms