RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 DDX23Q9BUQ8 820 aaKnown RBP7.39□□□□□ -1.23
DMD-228ENST00000541735 ACBD3Q9H3P7 528 aa7.39□□□□□ -1.23
DMD-228ENST00000541735 ZNF644Q9H582 1327 aaPredicted RBP7.39□□□□□ -1.23
DMD-228ENST00000541735 KIAA1328Q86T90 577 aa7.39□□□□□ -1.23
DMD-228ENST00000541735 PKD2L1Q9P0L9 805 aa7.39□□□□□ -1.23
DMD-228ENST00000541735 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
DMD-228ENST00000541735 LARP1Q6PKG0 1096 aaKnown RBP7.39□□□□□ -1.23
DMD-228ENST00000541735 ZNF396Q96N95 335 aaPredicted RBP7.39□□□□□ -1.23
DMD-228ENST00000541735 C11orf95C9JLR9 678 aaPredicted RBP7.39□□□□□ -1.23
DMD-228ENST00000541735 GJC1P36383 396 aa7.39□□□□□ -1.23
DMD-228ENST00000541735 CCDC178Q5BJE1 867 aa7.39□□□□□ -1.23
DMD-228ENST00000541735 MPHOSPH6Q99547 160 aaKnown RBP7.39□□□□□ -1.23
DMD-228ENST00000541735 UTP14AQ9BVJ6 771 aaKnown RBP7.39□□□□□ -1.23
DMD-228ENST00000541735 PARP3Q9Y6F1 533 aa7.39□□□□□ -1.23
DMD-228ENST00000541735 HSPA2P54652 639 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 MYO15BQ96JP2 1530 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 GNAI3P08754 354 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 PRC1O43663 620 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 ATP6V1AP38606 617 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 APBB1IPQ7Z5R6 666 aaPredicted RBP7.38□□□□□ -1.23
DMD-228ENST00000541735 HDAC9Q9UKV0 1011 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 NOB1Q9ULX3 412 aaKnown RBP7.38□□□□□ -1.23
DMD-228ENST00000541735 EXOSC9Q06265 439 aaKnown RBP7.38□□□□□ -1.23
DMD-228ENST00000541735 NAPBQ9H115 298 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 ATP5J2-PTCD1G3V325 749 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 CNGA1P29973 690 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 NUCB2P80303 420 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 CENPQQ7L2Z9 268 aaPredicted RBP7.38□□□□□ -1.23
DMD-228ENST00000541735 TCHPQ9BT92 498 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 SRCIN1Q9C0H9 1055 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 ZNF287Q9HBT7 754 aa7.38□□□□□ -1.23
DMD-228ENST00000541735 BCCIPQ9P287 314 aaKnown RBP eCLIP7.38□□□□□ -1.23
DMD-228ENST00000541735 PIP4K2AP48426 406 aaPredicted RBP7.37□□□□□ -1.23
DMD-228ENST00000541735 WAPLQ7Z5K2 1190 aa7.37□□□□□ -1.23
DMD-228ENST00000541735 FNBP4Q8N3X1 1017 aaPredicted RBP7.37□□□□□ -1.23
DMD-228ENST00000541735 ARGLU1Q9NWB6 273 aaPredicted RBP7.37□□□□□ -1.23
DMD-228ENST00000541735 TMCO5BA8MYB1 307 aa7.37□□□□□ -1.23
DMD-228ENST00000541735 JAKMIP3Q5VZ66 844 aa7.37□□□□□ -1.23
DMD-228ENST00000541735 SNRKQ9NRH2 765 aa7.37□□□□□ -1.23
DMD-228ENST00000541735 ATP2C2O75185 946 aa7.37□□□□□ -1.23
DMD-228ENST00000541735 BOLA2Q9H3K6 86 aa7.37□□□□□ -1.23
DMD-228ENST00000541735 ABCC8Q09428 1581 aa7.37□□□□□ -1.23
DMD-228ENST00000541735 IFIT5Q13325 482 aaKnown RBP7.37□□□□□ -1.23
DMD-228ENST00000541735 PHACTR2O75167 634 aa7.37□□□□□ -1.23
DMD-228ENST00000541735 HLA-DOAP06340 250 aa7.37□□□□□ -1.23
DMD-228ENST00000541735 PRPF4BQ13523 1007 aaKnown RBP7.37□□□□□ -1.23
DMD-228ENST00000541735 GTF3C6Q969F1 213 aa7.37□□□□□ -1.23
DMD-228ENST00000541735 EHMT1Q9H9B1 1298 aa7.37□□□□□ -1.23
DMD-228ENST00000541735 LPXNO60711 386 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 ZYXQ15942 572 aaKnown RBP7.36□□□□□ -1.23
DMD-228ENST00000541735 MCM10Q7L590 875 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 DYDC1Q8WWB3 177 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 LARP6Q9BRS8 491 aaKnown RBP7.36□□□□□ -1.23
DMD-228ENST00000541735 LUC7LQ9NQ29 371 aaKnown RBP7.36□□□□□ -1.23
DMD-228ENST00000541735 PRPF40AO75400 957 aaKnown RBP7.36□□□□□ -1.23
DMD-228ENST00000541735 SLC5A1P13866 664 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 RABEP1Q15276 862 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 CAVIN1Q6NZI2 390 aaKnown RBP7.36□□□□□ -1.23
DMD-228ENST00000541735 TTC30AQ86WT1 665 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 PPP6R1Q9UPN7 881 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 CYP46A1Q9Y6A2 500 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 HARSP12081 509 aaKnown RBP7.36□□□□□ -1.23
DMD-228ENST00000541735 CACNA2D4Q7Z3S7 1137 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 TAF4BQ92750 862 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 CEP63Q96MT8 703 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 JAKMIP1Q96N16 626 aaKnown RBP7.36□□□□□ -1.23
DMD-228ENST00000541735 SLC12A5Q9H2X9 1139 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 CDC45O75419 566 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 CETN2P41208 172 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 MSL1Q68DK7 614 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 HOOK3Q86VS8 718 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 IMMTQ16891 758 aaKnown RBP7.36□□□□□ -1.23
DMD-228ENST00000541735 SETDB2Q96T68 719 aa7.36□□□□□ -1.23
DMD-228ENST00000541735 ATF7IPQ6VMQ6 1270 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 ANO3Q9BYT9 981 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 TNIKQ9UKE5 1360 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 FMN1Q68DA7 1419 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 CCDC117Q8IWD4 279 aaPredicted RBP7.35□□□□□ -1.23
DMD-228ENST00000541735 CABLES1Q8TDN4 633 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 PANK2Q9BZ23 570 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 CCDC8Q9H0W5 538 aaPredicted RBP7.35□□□□□ -1.23
DMD-228ENST00000541735 STX8Q9UNK0 236 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 TSPY2A6NKD2 308 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 HIP1O00291 1037 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 IDEP14735 1019 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 C22orf23Q9BZE7 217 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 LRRCC1Q9C099 1032 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 GPHNQ9NQX3 736 aaPredicted RBP7.35□□□□□ -1.23
DMD-228ENST00000541735 STAMBPO95630 424 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 PDE4AP27815 886 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 HSP90AA2PQ14568 343 aaPredicted RBP7.35□□□□□ -1.23
DMD-228ENST00000541735 USP47Q96K76 1375 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 RRP1P56182 461 aaKnown RBP7.35□□□□□ -1.23
DMD-228ENST00000541735 SKIV2LQ15477 1246 aaKnown RBP7.35□□□□□ -1.23
DMD-228ENST00000541735 CCDC91Q7Z6B0 441 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 HAUS7Q99871 368 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 KRT28Q7Z3Y7 464 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 CCDC24Q8N4L8 307 aa7.35□□□□□ -1.23
DMD-228ENST00000541735 THUMPD2Q9BTF0 503 aaKnown RBP7.35□□□□□ -1.23
DMD-228ENST00000541735 TIMELESSQ9UNS1 1208 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms