RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 CPSF1Q10570 1443 aaKnown RBP11.04□□□□□ -0.64
LMO3-226ENST00000541589 TNS2Q63HR2 1409 aa11.04□□□□□ -0.64
LMO3-226ENST00000541589 PPIP5K1Q6PFW1 1433 aa11.04□□□□□ -0.64
LMO3-226ENST00000541589 GRIN3BO60391 1043 aa11.04□□□□□ -0.64
LMO3-226ENST00000541589 MMRN1Q13201 1228 aa11.04□□□□□ -0.64
LMO3-226ENST00000541589 USP6P35125 1406 aa11.04□□□□□ -0.64
LMO3-226ENST00000541589 ATP10DQ9P241 1426 aa11.04□□□□□ -0.64
LMO3-226ENST00000541589 PER1O15534 1290 aaPredicted RBP11.03□□□□□ -0.64
LMO3-226ENST00000541589 POLD1P28340 1107 aa11.03□□□□□ -0.64
LMO3-226ENST00000541589 RALBP1Q15311 655 aa11.03□□□□□ -0.64
LMO3-226ENST00000541589 SCUBE2Q9NQ36 999 aa11.03□□□□□ -0.64
LMO3-226ENST00000541589 QRICH2Q9H0J4 1663 aa11.03□□□□□ -0.64
LMO3-226ENST00000541589 PLCG2P16885 1265 aa11.02□□□□□ -0.65
LMO3-226ENST00000541589 PNPLA7Q6ZV29 1317 aa11.02□□□□□ -0.65
LMO3-226ENST00000541589 ACSBG1Q96GR2 724 aa11.02□□□□□ -0.65
LMO3-226ENST00000541589 OCEL1Q9H607 264 aa11.02□□□□□ -0.65
LMO3-226ENST00000541589 PANK3Q9H999 370 aa11.02□□□□□ -0.65
LMO3-226ENST00000541589 MRS2Q9HD23 443 aa11.02□□□□□ -0.65
LMO3-226ENST00000541589 QSER1Q2KHR3 1735 aa11.01□□□□□ -0.65
LMO3-226ENST00000541589 ABCC6O95255 1503 aa11.01□□□□□ -0.65
LMO3-226ENST00000541589 ADCY9O60503 1353 aa11.01□□□□□ -0.65
LMO3-226ENST00000541589 PIK3C2AO00443 1686 aa11.01□□□□□ -0.65
LMO3-226ENST00000541589 MYBBP1AQ9BQG0 1328 aaKnown RBP11□□□□□ -0.65
LMO3-226ENST00000541589 ECM2O94769 699 aaPredicted RBP11□□□□□ -0.65
LMO3-226ENST00000541589 GOLGA2Q08379 1002 aa11□□□□□ -0.65
LMO3-226ENST00000541589 CCDC184Q52MB2 194 aa11□□□□□ -0.65
LMO3-226ENST00000541589 CSB-PGBD3P0DP91 1061 aa11□□□□□ -0.65
LMO3-226ENST00000541589 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
LMO3-226ENST00000541589 GPBP1L1Q9HC44 474 aaPredicted RBP11□□□□□ -0.65
LMO3-226ENST00000541589 CABP2Q9NPB3 220 aa11□□□□□ -0.65
LMO3-226ENST00000541589 CABP1Q9NZU7 370 aa11□□□□□ -0.65
LMO3-226ENST00000541589 BTAF1O14981 1849 aa10.99□□□□□ -0.65
LMO3-226ENST00000541589 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
LMO3-226ENST00000541589 SLC27A3Q5K4L6 730 aa10.99□□□□□ -0.65
LMO3-226ENST00000541589 PDCD7Q8N8D1 485 aaKnown RBP10.99□□□□□ -0.65
LMO3-226ENST00000541589 KCNH5Q8NCM2 988 aa10.99□□□□□ -0.65
LMO3-226ENST00000541589 PUS7Q96PZ0 661 aaKnown RBP10.99□□□□□ -0.65
LMO3-226ENST00000541589 RGPD5Q99666 1765 aa10.98□□□□□ -0.65
LMO3-226ENST00000541589 NPC1L1Q9UHC9 1359 aa10.97□□□□□ -0.65
LMO3-226ENST00000541589 NFAT5O94916 1531 aa10.97□□□□□ -0.65
LMO3-226ENST00000541589 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.97□□□□□ -0.65
LMO3-226ENST00000541589 ZFP91Q96JP5 570 aaPredicted RBP10.97□□□□□ -0.65
LMO3-226ENST00000541589 EVC2Q86UK5 1308 aa10.96□□□□□ -0.65
LMO3-226ENST00000541589 CNGB1Q14028 1251 aaPredicted RBP10.96□□□□□ -0.65
LMO3-226ENST00000541589 TFCP2L1Q9NZI6 479 aa10.96□□□□□ -0.65
LMO3-226ENST00000541589 KNSTRNQ9Y448 316 aa10.96□□□□□ -0.65
LMO3-226ENST00000541589 GTF3C3Q9Y5Q9 886 aa10.96□□□□□ -0.65
LMO3-226ENST00000541589 TUBGCP6Q96RT7 1819 aa10.95□□□□□ -0.66
LMO3-226ENST00000541589 TTC21BQ7Z4L5 1316 aa10.95□□□□□ -0.66
LMO3-226ENST00000541589 KIF3CO14782 793 aa10.95□□□□□ -0.66
LMO3-226ENST00000541589 IL2RBP14784 551 aa10.95□□□□□ -0.66
LMO3-226ENST00000541589 HNRNPUQ00839 825 aaKnown RBP eCLIP10.95□□□□□ -0.66
LMO3-226ENST00000541589 SPNS2Q8IVW8 549 aa10.95□□□□□ -0.66
LMO3-226ENST00000541589 FAM9BQ8IZU0 186 aa10.95□□□□□ -0.66
LMO3-226ENST00000541589 DNAJC5GQ8N7S2 189 aa10.95□□□□□ -0.66
LMO3-226ENST00000541589 TMC1Q8TDI8 760 aa10.95□□□□□ -0.66
LMO3-226ENST00000541589 ERBB3P21860 1342 aa10.95□□□□□ -0.66
LMO3-226ENST00000541589 RGL2O15211 777 aa10.94□□□□□ -0.66
LMO3-226ENST00000541589 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.94□□□□□ -0.66
LMO3-226ENST00000541589 SOX12O15370 315 aa10.93□□□□□ -0.66
LMO3-226ENST00000541589 KCNQ4P56696 695 aa10.93□□□□□ -0.66
LMO3-226ENST00000541589 AMER1Q5JTC6 1135 aaPredicted RBP10.93□□□□□ -0.66
LMO3-226ENST00000541589 CC2D1BQ5T0F9 858 aaKnown RBP10.93□□□□□ -0.66
LMO3-226ENST00000541589 ZNF526Q8TF50 670 aaPredicted RBP10.93□□□□□ -0.66
LMO3-226ENST00000541589 CD2APQ9Y5K6 639 aa10.93□□□□□ -0.66
LMO3-226ENST00000541589 TTC21AQ8NDW8 1320 aa10.93□□□□□ -0.66
LMO3-226ENST00000541589 APLP1P51693 650 aa10.93□□□□□ -0.66
LMO3-226ENST00000541589 COL23A1Q86Y22 540 aaPredicted RBP10.93□□□□□ -0.66
LMO3-226ENST00000541589 PNISRQ8TF01 805 aaKnown RBP10.93□□□□□ -0.66
LMO3-226ENST00000541589 EFCAB3Q8N7B9 438 aa10.92□□□□□ -0.66
LMO3-226ENST00000541589 NLRP2Q9NX02 1062 aa10.92□□□□□ -0.66
LMO3-226ENST00000541589 NSD2O96028 1365 aa10.92□□□□□ -0.66
LMO3-226ENST00000541589 CARD14Q9BXL6 1004 aa10.9□□□□□ -0.66
LMO3-226ENST00000541589 LY75O60449 1722 aa10.9□□□□□ -0.66
LMO3-226ENST00000541589 ZBED9Q6R2W3 1325 aa10.9□□□□□ -0.67
LMO3-226ENST00000541589 INSRP06213 1382 aa10.89□□□□□ -0.67
LMO3-226ENST00000541589 USP31Q70CQ4 1352 aa10.89□□□□□ -0.67
LMO3-226ENST00000541589 ANKRD36BQ8N2N9 1353 aa10.89□□□□□ -0.67
LMO3-226ENST00000541589 COL13A1Q5TAT6 717 aaPredicted RBP10.89□□□□□ -0.67
LMO3-226ENST00000541589 TAOK2Q9UL54 1235 aa10.89□□□□□ -0.67
LMO3-226ENST00000541589 PRIM1P49642 420 aaKnown RBP10.88□□□□□ -0.67
LMO3-226ENST00000541589 MSL1Q68DK7 614 aa10.88□□□□□ -0.67
LMO3-226ENST00000541589 ANKRD24Q8TF21 1146 aa10.88□□□□□ -0.67
LMO3-226ENST00000541589 SLC12A5Q9H2X9 1139 aa10.88□□□□□ -0.67
LMO3-226ENST00000541589 NSD3Q9BZ95 1437 aa10.88□□□□□ -0.67
LMO3-226ENST00000541589 PPP2R1AP30153 589 aa10.87□□□□□ -0.67
LMO3-226ENST00000541589 DPY19L2Q6NUT2 758 aa10.87□□□□□ -0.67
LMO3-226ENST00000541589 DDX54Q8TDD1 881 aaKnown RBP10.87□□□□□ -0.67
LMO3-226ENST00000541589 CCNL1Q9UK58 526 aaPredicted RBP10.87□□□□□ -0.67
LMO3-226ENST00000541589 KAT6BQ8WYB5 2073 aa10.87□□□□□ -0.67
LMO3-226ENST00000541589 TOMM70O94826 608 aa10.87□□□□□ -0.67
LMO3-226ENST00000541589 JMYQ8N9B5 988 aa10.87□□□□□ -0.67
LMO3-226ENST00000541589 USP54Q70EL1 1684 aa10.86□□□□□ -0.67
LMO3-226ENST00000541589 SYTL4Q96C24 671 aaPredicted RBP10.86□□□□□ -0.67
LMO3-226ENST00000541589 IGSF1Q8N6C5 1336 aa10.85□□□□□ -0.67
LMO3-226ENST00000541589 CICQ96RK0 1608 aaPredicted RBP10.85□□□□□ -0.67
LMO3-226ENST00000541589 PRELPP51888 382 aa10.85□□□□□ -0.67
LMO3-226ENST00000541589 L3MBTL3Q96JM7 780 aaPredicted RBP10.85□□□□□ -0.67
LMO3-226ENST00000541589 FLAD1Q8NFF5 587 aa10.84□□□□□ -0.67
LMO3-226ENST00000541589 CGNL1Q0VF96 1302 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms