RNA–Protein interactions for RNA: ENST00000541097.5

LDHA-219, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-219ENST00000541097 CCNL1Q9UK58 526 aaPredicted RBP9.24□□□□□ -0.93
LDHA-219ENST00000541097 LRP5O75197 1615 aa9.23□□□□□ -0.93
LDHA-219ENST00000541097 NHSQ6T4R5 1651 aa9.23□□□□□ -0.93
LDHA-219ENST00000541097 ZBTB7AO95365 584 aa9.23□□□□□ -0.93
LDHA-219ENST00000541097 KCNQ4P56696 695 aa9.23□□□□□ -0.93
LDHA-219ENST00000541097 AEBP1Q8IUX7 1158 aa9.23□□□□□ -0.93
LDHA-219ENST00000541097 NUP188Q5SRE5 1749 aa9.22□□□□□ -0.93
LDHA-219ENST00000541097 KIF20BQ96Q89 1820 aa9.22□□□□□ -0.93
LDHA-219ENST00000541097 DIAPH1O60610 1272 aaKnown RBP9.22□□□□□ -0.93
LDHA-219ENST00000541097 GABBR2O75899 941 aa9.22□□□□□ -0.93
LDHA-219ENST00000541097 ATG3Q9NT62 314 aa9.22□□□□□ -0.93
LDHA-219ENST00000541097 TMOD3Q9NYL9 352 aa9.22□□□□□ -0.93
LDHA-219ENST00000541097 TFCP2L1Q9NZI6 479 aa9.22□□□□□ -0.93
LDHA-219ENST00000541097 ASAP1Q9ULH1 1129 aa9.22□□□□□ -0.93
LDHA-219ENST00000541097 PNPLA7Q6ZV29 1317 aa9.22□□□□□ -0.93
LDHA-219ENST00000541097 ANKRD26Q9UPS8 1709 aa9.22□□□□□ -0.93
LDHA-219ENST00000541097 FARP1Q9Y4F1 1045 aaPredicted RBP9.21□□□□□ -0.94
LDHA-219ENST00000541097 PALLDQ8WX93 1383 aa9.21□□□□□ -0.94
LDHA-219ENST00000541097 LOC102724428A0A0B4J2F2 783 aa9.2□□□□□ -0.94
LDHA-219ENST00000541097 ZEB1P37275 1124 aaPredicted RBP9.2□□□□□ -0.94
LDHA-219ENST00000541097 SIK1P57059 783 aa9.2□□□□□ -0.94
LDHA-219ENST00000541097 AKAP4Q5JQC9 854 aa9.2□□□□□ -0.94
LDHA-219ENST00000541097 ZNF530Q6P9A1 599 aaPredicted RBP9.2□□□□□ -0.94
LDHA-219ENST00000541097 COL23A1Q86Y22 540 aaPredicted RBP9.2□□□□□ -0.94
LDHA-219ENST00000541097 FLAD1Q8NFF5 587 aa9.2□□□□□ -0.94
LDHA-219ENST00000541097 PPP1R1BQ9UD71 204 aaPredicted RBP9.2□□□□□ -0.94
LDHA-219ENST00000541097 CD44P16070 742 aaKnown RBP9.19□□□□□ -0.94
LDHA-219ENST00000541097 C1orf141Q5JVX7 400 aa9.19□□□□□ -0.94
LDHA-219ENST00000541097 NFATC2IPQ8NCF5 419 aa9.19□□□□□ -0.94
LDHA-219ENST00000541097 SLC4A9Q96Q91 983 aa9.19□□□□□ -0.94
LDHA-219ENST00000541097 ARXQ96QS3 562 aa9.19□□□□□ -0.94
LDHA-219ENST00000541097 SYT17Q9BSW7 474 aa9.19□□□□□ -0.94
LDHA-219ENST00000541097 PAPPAQ13219 1627 aa9.19□□□□□ -0.94
LDHA-219ENST00000541097 RGPD2P0DJD1 1756 aa9.19□□□□□ -0.94
LDHA-219ENST00000541097 MAP2P11137 1827 aaKnown RBP9.18□□□□□ -0.94
LDHA-219ENST00000541097 CABP4P57796 275 aa9.18□□□□□ -0.94
LDHA-219ENST00000541097 ITPK1Q13572 414 aa9.18□□□□□ -0.94
LDHA-219ENST00000541097 MTHFSDQ2M296 383 aaKnown RBP9.18□□□□□ -0.94
LDHA-219ENST00000541097 RC3H1Q5TC82 1133 aaKnown RBP9.18□□□□□ -0.94
LDHA-219ENST00000541097 SHANK3Q9BYB0 1731 aa9.18□□□□□ -0.94
LDHA-219ENST00000541097 MAP3K5Q99683 1374 aa9.17□□□□□ -0.94
LDHA-219ENST00000541097 HMOX1P09601 288 aa9.17□□□□□ -0.94
LDHA-219ENST00000541097 SSFA2P28290 1259 aa9.17□□□□□ -0.94
LDHA-219ENST00000541097 PPP2R1AP30153 589 aa9.17□□□□□ -0.94
LDHA-219ENST00000541097 ATP6V1AP38606 617 aa9.17□□□□□ -0.94
LDHA-219ENST00000541097 LINC00116Q8NCU8 138 aa9.17□□□□□ -0.94
LDHA-219ENST00000541097 FHDC1Q9C0D6 1143 aaPredicted RBP9.17□□□□□ -0.94
LDHA-219ENST00000541097 LGR6Q9HBX8 967 aa9.17□□□□□ -0.94
LDHA-219ENST00000541097 BTAF1O14981 1849 aa9.17□□□□□ -0.94
LDHA-219ENST00000541097 PKD1L3Q7Z443 1732 aa9.17□□□□□ -0.94
LDHA-219ENST00000541097 KDM6AO15550 1401 aaPredicted RBP9.16□□□□□ -0.94
LDHA-219ENST00000541097 RNMTO43148 476 aaKnown RBP9.16□□□□□ -0.94
LDHA-219ENST00000541097 AMIGO3Q86WK7 504 aa9.16□□□□□ -0.94
LDHA-219ENST00000541097 SLC52A2Q9HAB3 445 aa9.16□□□□□ -0.94
LDHA-219ENST00000541097 CASZ1Q86V15 1759 aa9.16□□□□□ -0.94
LDHA-219ENST00000541097 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.15□□□□□ -0.94
LDHA-219ENST00000541097 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
LDHA-219ENST00000541097 FCHSD2O94868 740 aa9.15□□□□□ -0.94
LDHA-219ENST00000541097 POLD1P28340 1107 aa9.15□□□□□ -0.94
LDHA-219ENST00000541097 AK7Q96M32 723 aa9.15□□□□□ -0.94
LDHA-219ENST00000541097 CFAP53Q96M91 514 aa9.15□□□□□ -0.94
LDHA-219ENST00000541097 COL3A1P02461 1466 aaPredicted RBP9.15□□□□□ -0.95
LDHA-219ENST00000541097 CLCN6P51797 869 aa9.14□□□□□ -0.95
LDHA-219ENST00000541097 IL17REQ8NFR9 667 aa9.14□□□□□ -0.95
LDHA-219ENST00000541097 PHACTR3Q96KR7 559 aa9.14□□□□□ -0.95
LDHA-219ENST00000541097 RSPH6AQ9H0K4 717 aa9.14□□□□□ -0.95
LDHA-219ENST00000541097 NUDCQ9Y266 331 aa9.14□□□□□ -0.95
LDHA-219ENST00000541097 U2SURPO15042 1029 aaKnown RBP9.13□□□□□ -0.95
LDHA-219ENST00000541097 PTCD1O75127 700 aaKnown RBP9.13□□□□□ -0.95
LDHA-219ENST00000541097 RPS6KA4O75676 772 aa9.13□□□□□ -0.95
LDHA-219ENST00000541097 CNGB1Q14028 1251 aaPredicted RBP9.13□□□□□ -0.95
LDHA-219ENST00000541097 TRAPPC3LQ5T215 181 aa9.13□□□□□ -0.95
LDHA-219ENST00000541097 GAS2L2Q8NHY3 880 aa9.13□□□□□ -0.95
LDHA-219ENST00000541097 LY75O60449 1722 aa9.13□□□□□ -0.95
LDHA-219ENST00000541097 DOT1LQ8TEK3 1739 aa9.13□□□□□ -0.95
LDHA-219ENST00000541097 CNTNAP4Q9C0A0 1308 aa9.12□□□□□ -0.95
LDHA-219ENST00000541097 GNAT3A8MTJ3 354 aa9.12□□□□□ -0.95
LDHA-219ENST00000541097 SMIM5Q71RC9 77 aa9.12□□□□□ -0.95
LDHA-219ENST00000541097 VSIG10Q8N0Z9 540 aa9.12□□□□□ -0.95
LDHA-219ENST00000541097 ARHGEF1Q92888 912 aaKnown RBP9.12□□□□□ -0.95
LDHA-219ENST00000541097 RTCBQ9Y3I0 505 aaKnown RBP9.12□□□□□ -0.95
LDHA-219ENST00000541097 CD2APQ9Y5K6 639 aa9.12□□□□□ -0.95
LDHA-219ENST00000541097 GNPATO15228 680 aa9.11□□□□□ -0.95
LDHA-219ENST00000541097 HTATSF1O43719 755 aaKnown RBP9.11□□□□□ -0.95
LDHA-219ENST00000541097 U2AF1L5P0DN76 240 aaPredicted RBP9.11□□□□□ -0.95
LDHA-219ENST00000541097 PRKAR2BP31323 418 aa9.11□□□□□ -0.95
LDHA-219ENST00000541097 U2AF1Q01081 240 aaKnown RBP eCLIP9.11□□□□□ -0.95
LDHA-219ENST00000541097 RALBP1Q15311 655 aa9.11□□□□□ -0.95
LDHA-219ENST00000541097 INTS5Q6P9B9 1019 aaKnown RBP9.11□□□□□ -0.95
LDHA-219ENST00000541097 NLGN1Q8N2Q7 840 aa9.11□□□□□ -0.95
LDHA-219ENST00000541097 TOGARAM1Q9Y4F4 1720 aa9.11□□□□□ -0.95
LDHA-219ENST00000541097 CEMIPQ8WUJ3 1361 aa9.11□□□□□ -0.95
LDHA-219ENST00000541097 UTRNP46939 3433 aa9.11□□□□□ -0.95
LDHA-219ENST00000541097 PHF14O94880 888 aa9.1□□□□□ -0.95
LDHA-219ENST00000541097 CYP19A1P11511 503 aaPredicted RBP9.1□□□□□ -0.95
LDHA-219ENST00000541097 SLC39A6Q13433 755 aa9.1□□□□□ -0.95
LDHA-219ENST00000541097 GYS1P13807 737 aa9.09□□□□□ -0.95
LDHA-219ENST00000541097 CRKLP46109 303 aaKnown RBP9.09□□□□□ -0.95
LDHA-219ENST00000541097 DDX10Q13206 875 aaKnown RBP9.09□□□□□ -0.95
LDHA-219ENST00000541097 MSL1Q68DK7 614 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms