RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 MEX3CQ5U5Q3 659 aaKnown RBP6.4□□□□□ -1.38
PROM1-220ENST00000540805 C17orf53Q8N3J3 647 aaPredicted RBP6.4□□□□□ -1.38
PROM1-220ENST00000540805 NECTIN2Q92692 538 aa6.4□□□□□ -1.38
PROM1-220ENST00000540805 LNPKQ9C0E8 428 aa6.4□□□□□ -1.38
PROM1-220ENST00000540805 TRPM3Q9HCF6 1732 aaPredicted RBP6.4□□□□□ -1.38
PROM1-220ENST00000540805 LRRC37A3O60309 1634 aa6.4□□□□□ -1.38
PROM1-220ENST00000540805 PLEKHG3A1L390 1219 aa6.4□□□□□ -1.39
PROM1-220ENST00000540805 HS1BP3Q53T59 392 aa6.4□□□□□ -1.39
PROM1-220ENST00000540805 SMAP1Q8IYB5 467 aaPredicted RBP6.4□□□□□ -1.39
PROM1-220ENST00000540805 TSR2Q969E8 191 aaKnown RBP6.4□□□□□ -1.39
PROM1-220ENST00000540805 TBX22Q9Y458 520 aa6.4□□□□□ -1.39
PROM1-220ENST00000540805 EXOSC9Q06265 439 aaKnown RBP6.4□□□□□ -1.39
PROM1-220ENST00000540805 BMP2KLQ5H9B9 411 aa6.4□□□□□ -1.39
PROM1-220ENST00000540805 NME9Q86XW9 330 aa6.4□□□□□ -1.39
PROM1-220ENST00000540805 XIRP1Q702N8 1843 aaKnown RBP6.39□□□□□ -1.39
PROM1-220ENST00000540805 BAG4O95429 457 aaKnown RBP6.39□□□□□ -1.39
PROM1-220ENST00000540805 IL13P35225 146 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 ZRSR1Q15695 479 aaKnown RBP6.39□□□□□ -1.39
PROM1-220ENST00000540805 CHD1LQ86WJ1 897 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 AEBP1Q8IUX7 1158 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 TMEM57Q8N5G2 664 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 KIF16BQ96L93 1317 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 CRYBG1Q9Y4K1 1723 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 ZNF445P59923 1031 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 CASC1Q6TDU7 716 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 CLEC17AQ6ZS10 378 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 SSH1Q8WYL5 1049 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 TRERF1Q96PN7 1200 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 SLC26A8Q96RN1 970 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 STK31Q9BXU1 1019 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 LTN1O94822 1766 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 CLSTN1O94985 981 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 CD2BP2O95400 341 aaKnown RBP6.39□□□□□ -1.39
PROM1-220ENST00000540805 GAS2L2Q8NHY3 880 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 KIF2CQ99661 725 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 TMX4Q9H1E5 349 aaPredicted RBP6.39□□□□□ -1.39
PROM1-220ENST00000540805 ZBTB40Q9NUA8 1239 aa6.39□□□□□ -1.39
PROM1-220ENST00000540805 NOB1Q9ULX3 412 aaKnown RBP6.39□□□□□ -1.39
PROM1-220ENST00000540805 IPO8O15397 1037 aaKnown RBP6.38□□□□□ -1.39
PROM1-220ENST00000540805 MTERF4Q7Z6M4 381 aaKnown RBP6.38□□□□□ -1.39
PROM1-220ENST00000540805 CCDC61Q9Y6R9 512 aa6.38□□□□□ -1.39
PROM1-220ENST00000540805 ZNF500O60304 480 aaPredicted RBP6.38□□□□□ -1.39
PROM1-220ENST00000540805 IPO4Q8TEX9 1081 aaKnown RBP6.38□□□□□ -1.39
PROM1-220ENST00000540805 NOL7Q9UMY1 257 aaKnown RBP6.38□□□□□ -1.39
PROM1-220ENST00000540805 PIK3R4Q99570 1358 aa6.38□□□□□ -1.39
PROM1-220ENST00000540805 NFAT5O94916 1531 aa6.38□□□□□ -1.39
PROM1-220ENST00000540805 EIF2S2P20042 333 aaKnown RBP6.38□□□□□ -1.39
PROM1-220ENST00000540805 CSPP1Q1MSJ5 1256 aa6.38□□□□□ -1.39
PROM1-220ENST00000540805 MCTP1Q6DN14 999 aa6.38□□□□□ -1.39
PROM1-220ENST00000540805 CAVIN1Q6NZI2 390 aaKnown RBP6.38□□□□□ -1.39
PROM1-220ENST00000540805 ZNF710Q8N1W2 664 aa6.38□□□□□ -1.39
PROM1-220ENST00000540805 AMOTL2Q9Y2J4 779 aa6.38□□□□□ -1.39
PROM1-220ENST00000540805 EMILIN1Q9Y6C2 1016 aa6.38□□□□□ -1.39
PROM1-220ENST00000540805 NUTM2BA6NNL0 878 aaPredicted RBP6.37□□□□□ -1.39
PROM1-220ENST00000540805 NUTM2EB1AL46 878 aaPredicted RBP6.37□□□□□ -1.39
PROM1-220ENST00000540805 PIP4K2BP78356 416 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 NUCB2P80303 420 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 NUTM2AQ8IVF1 878 aaPredicted RBP6.37□□□□□ -1.39
PROM1-220ENST00000540805 CAMTA1Q9Y6Y1 1673 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 ANKARQ7Z5J8 1434 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 AK9Q5TCS8 1911 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 ZSCAN23Q3MJ62 389 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 TBC1D9Q6ZT07 1266 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 ZNF428Q96B54 188 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 PHACTR3Q96KR7 559 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 RBM42Q9BTD8 480 aaKnown RBP6.37□□□□□ -1.39
PROM1-220ENST00000540805 RGPD2P0DJD1 1756 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 ACEP12821 1306 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 ATF3P18847 181 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 ANKRD45Q5TZF3 282 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 PDLIM2Q96JY6 352 aa6.37□□□□□ -1.39
PROM1-220ENST00000540805 DYNC1I1O14576 645 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 TMPOP42166 694 aaKnown RBP6.36□□□□□ -1.39
PROM1-220ENST00000540805 TEFQ10587 303 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 GCC1Q96CN9 775 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 PPP1R1BQ9UD71 204 aaPredicted RBP6.36□□□□□ -1.39
PROM1-220ENST00000540805 ZKSCAN5Q9Y2L8 839 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 IL16Q14005 1332 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 TTC21BQ7Z4L5 1316 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 CDC45O75419 566 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 MCM5P33992 734 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 RBM33Q96EV2 1170 aaKnown RBP6.36□□□□□ -1.39
PROM1-220ENST00000540805 RBSNQ9H1K0 784 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 NLRP2Q9NX02 1062 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 ALS2Q96Q42 1657 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 KCNA6P17658 529 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 RABEP1Q15276 862 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 TOMM22Q9NS69 142 aa6.36□□□□□ -1.39
PROM1-220ENST00000540805 SASS6Q6UVJ0 657 aa6.35□□□□□ -1.39
PROM1-220ENST00000540805 PROSER2Q86WR7 435 aaPredicted RBP6.35□□□□□ -1.39
PROM1-220ENST00000540805 COG3Q96JB2 828 aa6.35□□□□□ -1.39
PROM1-220ENST00000540805 LMBRD1Q9NUN5 540 aa6.35□□□□□ -1.39
PROM1-220ENST00000540805 CCDC39Q9UFE4 941 aa6.35□□□□□ -1.39
PROM1-220ENST00000540805 RNF214Q8ND24 703 aa6.35□□□□□ -1.39
PROM1-220ENST00000540805 CFAP44Q96MT7 982 aa6.35□□□□□ -1.39
PROM1-220ENST00000540805 RBM27Q9P2N5 1060 aaKnown RBP6.35□□□□□ -1.39
PROM1-220ENST00000540805 LMO7Q8WWI1 1683 aa6.35□□□□□ -1.39
PROM1-220ENST00000540805 ALDH1L2Q3SY69 923 aa6.35□□□□□ -1.39
PROM1-220ENST00000540805 CCDC94Q9BW85 323 aaPredicted RBP6.35□□□□□ -1.39
PROM1-220ENST00000540805 ZNF853P0CG23 659 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms