RNA–Protein interactions for RNA: ENST00000539970.1

CORO1B-206, Transcript of coronin 1B, humanhuman

TSL 3

Gene CORO1B, Length 220 nt, Biotype retained intron, Subcellular localisation Cytosol, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CORO1B-206ENST00000539970 U2AF1Q01081 240 aaKnown RBP eCLIP16.77■□□□□ 0.28
CORO1B-206ENST00000539970 MRC1P22897 1456 aa16.77■□□□□ 0.28
CORO1B-206ENST00000539970 RNMTO43148 476 aaKnown RBP16.76■□□□□ 0.27
CORO1B-206ENST00000539970 PRKAR2BP31323 418 aa16.76■□□□□ 0.27
CORO1B-206ENST00000539970 NFATC2IPQ8NCF5 419 aa16.76■□□□□ 0.27
CORO1B-206ENST00000539970 GAS2L2Q8NHY3 880 aa16.76■□□□□ 0.27
CORO1B-206ENST00000539970 LGR6Q9HBX8 967 aa16.76■□□□□ 0.27
CORO1B-206ENST00000539970 UBR3Q6ZT12 1888 aa16.76■□□□□ 0.27
CORO1B-206ENST00000539970 FCHSD2O94868 740 aa16.75■□□□□ 0.27
CORO1B-206ENST00000539970 MTFR1LQ9H019 292 aa16.75■□□□□ 0.27
CORO1B-206ENST00000539970 COL24A1Q17RW2 1714 aa16.75■□□□□ 0.27
CORO1B-206ENST00000539970 ATP6V1AP38606 617 aa16.74■□□□□ 0.27
CORO1B-206ENST00000539970 PHACTR3Q96KR7 559 aa16.74■□□□□ 0.27
CORO1B-206ENST00000539970 SLC52A2Q9HAB3 445 aa16.74■□□□□ 0.27
CORO1B-206ENST00000539970 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
CORO1B-206ENST00000539970 MAP3K5Q99683 1374 aa16.74■□□□□ 0.27
CORO1B-206ENST00000539970 COL5A3P25940 1745 aaPredicted RBP16.73■□□□□ 0.27
CORO1B-206ENST00000539970 PTGER2P43116 358 aa16.73■□□□□ 0.27
CORO1B-206ENST00000539970 ITPK1Q13572 414 aa16.73■□□□□ 0.27
CORO1B-206ENST00000539970 SLC16A10Q8TF71 515 aa16.73■□□□□ 0.27
CORO1B-206ENST00000539970 SIPA1L3O60292 1781 aaPredicted RBP16.72■□□□□ 0.27
CORO1B-206ENST00000539970 CICQ96RK0 1608 aaPredicted RBP16.72■□□□□ 0.27
CORO1B-206ENST00000539970 GNAT3A8MTJ3 354 aa16.72■□□□□ 0.27
CORO1B-206ENST00000539970 LINC00116Q8NCU8 138 aa16.72■□□□□ 0.27
CORO1B-206ENST00000539970 AK7Q96M32 723 aa16.72■□□□□ 0.27
CORO1B-206ENST00000539970 SLC4A9Q96Q91 983 aa16.72■□□□□ 0.27
CORO1B-206ENST00000539970 RBM42Q9BTD8 480 aaKnown RBP16.72■□□□□ 0.27
CORO1B-206ENST00000539970 PPP1R1BQ9UD71 204 aaPredicted RBP16.72■□□□□ 0.27
CORO1B-206ENST00000539970 MYBBP1AQ9BQG0 1328 aaKnown RBP16.71■□□□□ 0.27
CORO1B-206ENST00000539970 SGIP1Q9BQI5 828 aa16.71■□□□□ 0.27
CORO1B-206ENST00000539970 TJP1Q07157 1748 aa16.7■□□□□ 0.26
CORO1B-206ENST00000539970 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
CORO1B-206ENST00000539970 FLAD1Q8NFF5 587 aa16.7■□□□□ 0.26
CORO1B-206ENST00000539970 SRCAPQ6ZRS2 3230 aa16.7■□□□□ 0.26
CORO1B-206ENST00000539970 UBR2Q8IWV8 1755 aa16.69■□□□□ 0.26
CORO1B-206ENST00000539970 DLG5Q8TDM6 1919 aa16.69■□□□□ 0.26
CORO1B-206ENST00000539970 PTCD1O75127 700 aaKnown RBP16.69■□□□□ 0.26
CORO1B-206ENST00000539970 IL17REQ8NFR9 667 aa16.69■□□□□ 0.26
CORO1B-206ENST00000539970 MYH14Q7Z406 1995 aaKnown RBP16.68■□□□□ 0.26
CORO1B-206ENST00000539970 MSH5O43196 834 aa16.68■□□□□ 0.26
CORO1B-206ENST00000539970 CEMIPQ8WUJ3 1361 aa16.67■□□□□ 0.26
CORO1B-206ENST00000539970 KCPQ6ZWJ8 1503 aa16.67■□□□□ 0.26
CORO1B-206ENST00000539970 ZNF316A6NFI3 1004 aaPredicted RBP16.67■□□□□ 0.26
CORO1B-206ENST00000539970 AMIGO3Q86WK7 504 aa16.67■□□□□ 0.26
CORO1B-206ENST00000539970 PRKRIP1Q9H875 184 aaPredicted RBP16.67■□□□□ 0.26
CORO1B-206ENST00000539970 GNPATO15228 680 aa16.66■□□□□ 0.26
CORO1B-206ENST00000539970 NEFMP07197 916 aa16.66■□□□□ 0.26
CORO1B-206ENST00000539970 SSFA2P28290 1259 aa16.66■□□□□ 0.26
CORO1B-206ENST00000539970 TEFQ10587 303 aa16.66■□□□□ 0.26
CORO1B-206ENST00000539970 SLC39A6Q13433 755 aa16.66■□□□□ 0.26
CORO1B-206ENST00000539970 PLEKHF1Q96S99 279 aa16.66■□□□□ 0.26
CORO1B-206ENST00000539970 CNTNAP4Q9C0A0 1308 aa16.66■□□□□ 0.26
CORO1B-206ENST00000539970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.65■□□□□ 0.26
CORO1B-206ENST00000539970 PHF14O94880 888 aa16.65■□□□□ 0.26
CORO1B-206ENST00000539970 RC3H1Q5TC82 1133 aaKnown RBP16.65■□□□□ 0.26
CORO1B-206ENST00000539970 SMIM5Q71RC9 77 aa16.65■□□□□ 0.26
CORO1B-206ENST00000539970 PNNQ9H307 717 aaKnown RBP16.65■□□□□ 0.26
CORO1B-206ENST00000539970 POLD1P28340 1107 aa16.64■□□□□ 0.25
CORO1B-206ENST00000539970 ARXQ96QS3 562 aa16.64■□□□□ 0.25
CORO1B-206ENST00000539970 HTATSF1O43719 755 aaKnown RBP16.63■□□□□ 0.25
CORO1B-206ENST00000539970 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
CORO1B-206ENST00000539970 C4AP0C0L4 1744 aa16.62■□□□□ 0.25
CORO1B-206ENST00000539970 CRKLP46109 303 aaKnown RBP16.62■□□□□ 0.25
CORO1B-206ENST00000539970 MCM10Q7L590 875 aa16.62■□□□□ 0.25
CORO1B-206ENST00000539970 TTC5Q8N0Z6 440 aa16.62■□□□□ 0.25
CORO1B-206ENST00000539970 FHDC1Q9C0D6 1143 aaPredicted RBP16.62■□□□□ 0.25
CORO1B-206ENST00000539970 RTCBQ9Y3I0 505 aaKnown RBP16.62■□□□□ 0.25
CORO1B-206ENST00000539970 RPS6KA4O75676 772 aa16.61■□□□□ 0.25
CORO1B-206ENST00000539970 MSL1Q68DK7 614 aa16.61■□□□□ 0.25
CORO1B-206ENST00000539970 ZNF790Q6PG37 636 aa16.61■□□□□ 0.25
CORO1B-206ENST00000539970 DNAJC10Q8IXB1 793 aa16.61■□□□□ 0.25
CORO1B-206ENST00000539970 VSIG10Q8N0Z9 540 aa16.61■□□□□ 0.25
CORO1B-206ENST00000539970 MAPK8IP3Q9UPT6 1336 aa16.61■□□□□ 0.25
CORO1B-206ENST00000539970 ADRA2BP18089 450 aa16.6■□□□□ 0.25
CORO1B-206ENST00000539970 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
CORO1B-206ENST00000539970 NFE2L2Q16236 605 aa16.6■□□□□ 0.25
CORO1B-206ENST00000539970 TRAPPC3LQ5T215 181 aa16.6■□□□□ 0.25
CORO1B-206ENST00000539970 BTBD11A6QL63 1104 aa16.59■□□□□ 0.25
CORO1B-206ENST00000539970 ZNF496Q96IT1 587 aaPredicted RBP16.59■□□□□ 0.25
CORO1B-206ENST00000539970 SYT17Q9BSW7 474 aa16.59■□□□□ 0.25
CORO1B-206ENST00000539970 CYP19A1P11511 503 aaPredicted RBP16.58■□□□□ 0.24
CORO1B-206ENST00000539970 INTS5Q6P9B9 1019 aaKnown RBP16.58■□□□□ 0.24
CORO1B-206ENST00000539970 ARHGEF1Q92888 912 aaKnown RBP16.58■□□□□ 0.24
CORO1B-206ENST00000539970 CCDC87Q9NVE4 849 aa16.58■□□□□ 0.24
CORO1B-206ENST00000539970 HEG1Q9ULI3 1381 aa16.58■□□□□ 0.24
CORO1B-206ENST00000539970 WDR43Q15061 677 aaKnown RBP eCLIP16.57■□□□□ 0.24
CORO1B-206ENST00000539970 FMNL2Q96PY5 1086 aa16.57■□□□□ 0.24
CORO1B-206ENST00000539970 KCNQ3O43525 872 aa16.56■□□□□ 0.24
CORO1B-206ENST00000539970 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
CORO1B-206ENST00000539970 RFC4P35249 363 aa16.55■□□□□ 0.24
CORO1B-206ENST00000539970 TAF7Q15545 349 aaPredicted RBP16.55■□□□□ 0.24
CORO1B-206ENST00000539970 TEX13AQ9BXU3 409 aaPredicted RBP16.55■□□□□ 0.24
CORO1B-206ENST00000539970 ADAMTS8Q9UP79 889 aa16.55■□□□□ 0.24
CORO1B-206ENST00000539970 SOS1Q07889 1333 aaPredicted RBP16.54■□□□□ 0.24
CORO1B-206ENST00000539970 KLHL34Q8N239 644 aa16.54■□□□□ 0.24
CORO1B-206ENST00000539970 STARD3NLO95772 234 aa16.53■□□□□ 0.24
CORO1B-206ENST00000539970 GYS1P13807 737 aa16.53■□□□□ 0.24
CORO1B-206ENST00000539970 TMPOP42166 694 aaKnown RBP16.53■□□□□ 0.24
CORO1B-206ENST00000539970 RIPK4P57078 832 aa16.53■□□□□ 0.24
CORO1B-206ENST00000539970 CCDC146Q8IYE0 955 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms