RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 RGS12O14924 1447 aa21.62■■□□□ 1.05
LTBR-207ENST00000539925 AHDC1Q5TGY3 1603 aaPredicted RBP21.61■■□□□ 1.05
LTBR-207ENST00000539925 PHKG2P15735 406 aa21.61■■□□□ 1.05
LTBR-207ENST00000539925 HDGFL1Q5TGJ6 251 aa21.61■■□□□ 1.05
LTBR-207ENST00000539925 GCC1Q96CN9 775 aa21.61■■□□□ 1.05
LTBR-207ENST00000539925 FAM161AQ3B820 660 aa21.6■■□□□ 1.05
LTBR-207ENST00000539925 DCAF5Q96JK2 942 aa21.6■■□□□ 1.05
LTBR-207ENST00000539925 ABCA3Q99758 1704 aa21.6■■□□□ 1.05
LTBR-207ENST00000539925 LTBP4Q8N2S1 1624 aa21.6■■□□□ 1.05
LTBR-207ENST00000539925 CARD10Q9BWT7 1032 aa21.6■■□□□ 1.05
LTBR-207ENST00000539925 COL5A2P05997 1499 aaPredicted RBP21.59■■□□□ 1.05
LTBR-207ENST00000539925 MEGF6O75095 1541 aa21.59■■□□□ 1.05
LTBR-207ENST00000539925 FLIIQ13045 1269 aa21.59■■□□□ 1.05
LTBR-207ENST00000539925 PDZRN3Q9UPQ7 1066 aa21.59■■□□□ 1.05
LTBR-207ENST00000539925 PKD1L3Q7Z443 1732 aa21.58■■□□□ 1.05
LTBR-207ENST00000539925 PXDNLA1KZ92 1463 aa21.58■■□□□ 1.05
LTBR-207ENST00000539925 RGS3P49796 1198 aa21.58■■□□□ 1.05
LTBR-207ENST00000539925 TOM1L2Q6ZVM7 507 aa21.58■■□□□ 1.05
LTBR-207ENST00000539925 RPAP2Q8IXW5 612 aaPredicted RBP21.57■■□□□ 1.04
LTBR-207ENST00000539925 SLC52A2Q9HAB3 445 aa21.57■■□□□ 1.04
LTBR-207ENST00000539925 HEG1Q9ULI3 1381 aa21.57■■□□□ 1.04
LTBR-207ENST00000539925 PARP4Q9UKK3 1724 aaKnown RBP21.56■■□□□ 1.04
LTBR-207ENST00000539925 ANP32AP39687 249 aaKnown RBP21.55■■□□□ 1.04
LTBR-207ENST00000539925 EVA1CP58658 441 aa21.55■■□□□ 1.04
LTBR-207ENST00000539925 FKBP5Q13451 457 aaPredicted RBP21.55■■□□□ 1.04
LTBR-207ENST00000539925 PCDH11XQ9BZA7 1347 aa21.55■■□□□ 1.04
LTBR-207ENST00000539925 PCDH11YQ9BZA8 1340 aa21.55■■□□□ 1.04
LTBR-207ENST00000539925 MRC1P22897 1456 aa21.55■■□□□ 1.04
LTBR-207ENST00000539925 SIPA1L3O60292 1781 aaPredicted RBP21.54■■□□□ 1.04
LTBR-207ENST00000539925 SCN11AQ9UI33 1791 aa21.54■■□□□ 1.04
LTBR-207ENST00000539925 DBF4Q9UBU7 674 aaPredicted RBP21.53■■□□□ 1.04
LTBR-207ENST00000539925 ROBO1Q9Y6N7 1651 aa21.53■■□□□ 1.04
LTBR-207ENST00000539925 KDM6AO15550 1401 aaPredicted RBP21.53■■□□□ 1.04
LTBR-207ENST00000539925 GNAI3P08754 354 aa21.53■■□□□ 1.04
LTBR-207ENST00000539925 G2E3Q7L622 706 aa21.53■■□□□ 1.04
LTBR-207ENST00000539925 ZCRB1Q8TBF4 217 aaKnown RBP21.53■■□□□ 1.04
LTBR-207ENST00000539925 COL22A1Q8NFW1 1626 aaPredicted RBP21.52■■□□□ 1.04
LTBR-207ENST00000539925 VIRMAQ69YN4 1812 aaKnown RBP21.52■■□□□ 1.04
LTBR-207ENST00000539925 GIGYF1O75420 1035 aaPredicted RBP21.52■■□□□ 1.04
LTBR-207ENST00000539925 IL2RBP14784 551 aa21.52■■□□□ 1.04
LTBR-207ENST00000539925 NUCB1Q02818 461 aa21.52■■□□□ 1.04
LTBR-207ENST00000539925 HMMRO75330 724 aa21.51■■□□□ 1.03
LTBR-207ENST00000539925 ZNF790Q6PG37 636 aa21.51■■□□□ 1.03
LTBR-207ENST00000539925 CYP27B1O15528 508 aa21.5■■□□□ 1.03
LTBR-207ENST00000539925 ANKRD44Q8N8A2 993 aa21.5■■□□□ 1.03
LTBR-207ENST00000539925 SLC4A10Q6U841 1118 aa21.5■■□□□ 1.03
LTBR-207ENST00000539925 SKAP1Q86WV1 359 aa21.5■■□□□ 1.03
LTBR-207ENST00000539925 EIF2S2P20042 333 aaKnown RBP21.49■■□□□ 1.03
LTBR-207ENST00000539925 NKX1-1Q15270 411 aaPredicted RBP21.49■■□□□ 1.03
LTBR-207ENST00000539925 HYPKQ9NX55 129 aa21.49■■□□□ 1.03
LTBR-207ENST00000539925 COL14A1Q05707 1796 aaKnown RBP21.48■■□□□ 1.03
LTBR-207ENST00000539925 ERVV-2B6SEH9 535 aa21.48■■□□□ 1.03
LTBR-207ENST00000539925 TOM1O60784 492 aa21.48■■□□□ 1.03
LTBR-207ENST00000539925 KCNQ3O43525 872 aa21.47■■□□□ 1.03
LTBR-207ENST00000539925 C8orf34Q49A92 452 aa21.47■■□□□ 1.03
LTBR-207ENST00000539925 CHD1LQ86WJ1 897 aa21.47■■□□□ 1.03
LTBR-207ENST00000539925 TTC5Q8N0Z6 440 aa21.47■■□□□ 1.03
LTBR-207ENST00000539925 N4BP2Q86UW6 1770 aaPredicted RBP21.47■■□□□ 1.03
LTBR-207ENST00000539925 GNAI2P04899 355 aa21.47■■□□□ 1.03
LTBR-207ENST00000539925 CABP4P57796 275 aa21.47■■□□□ 1.03
LTBR-207ENST00000539925 CHPF2Q9P2E5 772 aa21.47■■□□□ 1.03
LTBR-207ENST00000539925 HDAC5Q9UQL6 1122 aa21.47■■□□□ 1.03
LTBR-207ENST00000539925 F6X3S4 739 aa21.46■■□□□ 1.03
LTBR-207ENST00000539925 NFATC2IPQ8NCF5 419 aa21.46■■□□□ 1.03
LTBR-207ENST00000539925 NECTIN2Q92692 538 aa21.46■■□□□ 1.03
LTBR-207ENST00000539925 DCTPP1Q9H773 170 aa21.46■■□□□ 1.03
LTBR-207ENST00000539925 ZBTB47Q9UFB7 747 aaPredicted RBP21.46■■□□□ 1.03
LTBR-207ENST00000539925 ATP10DQ9P241 1426 aa21.45■■□□□ 1.02
LTBR-207ENST00000539925 CEP85Q6P2H3 762 aa21.45■■□□□ 1.02
LTBR-207ENST00000539925 SIRT2Q8IXJ6 389 aa21.45■■□□□ 1.02
LTBR-207ENST00000539925 MEIS3Q99687 375 aa21.45■■□□□ 1.02
LTBR-207ENST00000539925 C1orf115Q9H7X2 142 aa21.45■■□□□ 1.02
LTBR-207ENST00000539925 STRN4Q9NRL3 753 aa21.45■■□□□ 1.02
LTBR-207ENST00000539925 DDX58O95786 925 aaKnown RBP21.44■■□□□ 1.02
LTBR-207ENST00000539925 LARP1Q6PKG0 1096 aaKnown RBP21.44■■□□□ 1.02
LTBR-207ENST00000539925 FMNL2Q96PY5 1086 aa21.44■■□□□ 1.02
LTBR-207ENST00000539925 DDX21Q9NR30 783 aaKnown RBP eCLIP21.44■■□□□ 1.02
LTBR-207ENST00000539925 SNRPA1P09661 255 aaKnown RBP21.44■■□□□ 1.02
LTBR-207ENST00000539925 DNAAF4Q8WXU2 420 aa21.44■■□□□ 1.02
LTBR-207ENST00000539925 SRCIN1Q9C0H9 1055 aa21.44■■□□□ 1.02
LTBR-207ENST00000539925 IBTKQ9P2D0 1353 aaPredicted RBP21.43■■□□□ 1.02
LTBR-207ENST00000539925 BTG4Q9NY30 223 aa21.43■■□□□ 1.02
LTBR-207ENST00000539925 ANKRD45Q5TZF3 282 aa21.41■■□□□ 1.02
LTBR-207ENST00000539925 PHAXQ9H814 394 aaKnown RBP21.41■■□□□ 1.02
LTBR-207ENST00000539925 CDCA7Q9BWT1 371 aaPredicted RBP21.4■■□□□ 1.02
LTBR-207ENST00000539925 ERBB4Q15303 1308 aa21.4■■□□□ 1.02
LTBR-207ENST00000539925 EIF5BO60841 1220 aaKnown RBP21.4■■□□□ 1.02
LTBR-207ENST00000539925 ALDH1L1O75891 902 aa21.4■■□□□ 1.02
LTBR-207ENST00000539925 KSR2Q6VAB6 950 aa21.4■■□□□ 1.02
LTBR-207ENST00000539925 UBTFL1P0CB47 393 aaPredicted RBP21.39■■□□□ 1.01
LTBR-207ENST00000539925 DDRGK1Q96HY6 314 aa21.39■■□□□ 1.01
LTBR-207ENST00000539925 PI4KAP2A4QPH2 592 aa21.38■■□□□ 1.01
LTBR-207ENST00000539925 PI4KAP1Q8N8J0 262 aa21.38■■□□□ 1.01
LTBR-207ENST00000539925 IPO9Q96P70 1041 aaKnown RBP21.38■■□□□ 1.01
LTBR-207ENST00000539925 COL16A1Q07092 1604 aaPredicted RBP21.38■■□□□ 1.01
LTBR-207ENST00000539925 SLC39A6Q13433 755 aa21.37■■□□□ 1.01
LTBR-207ENST00000539925 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
LTBR-207ENST00000539925 ZNF496Q96IT1 587 aaPredicted RBP21.37■■□□□ 1.01
LTBR-207ENST00000539925 LNPKQ9C0E8 428 aa21.37■■□□□ 1.01
LTBR-207ENST00000539925 UPF2Q9HAU5 1272 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms