RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 POLR3EQ9NVU0 708 aa10.83□□□□□ -0.68
LDHA-217ENST00000539814 USP6P35125 1406 aa10.83□□□□□ -0.68
LDHA-217ENST00000539814 NPHP3Q7Z494 1330 aa10.83□□□□□ -0.68
LDHA-217ENST00000539814 KTN1Q86UP2 1357 aaKnown RBP10.82□□□□□ -0.68
LDHA-217ENST00000539814 POTEMA6NI47 508 aa10.82□□□□□ -0.68
LDHA-217ENST00000539814 SPDYE5A6NIY4 337 aa10.82□□□□□ -0.68
LDHA-217ENST00000539814 CDCA8Q53HL2 280 aa10.82□□□□□ -0.68
LDHA-217ENST00000539814 NUTM2GQ5VZR2 741 aa10.82□□□□□ -0.68
LDHA-217ENST00000539814 CPSF1Q10570 1443 aaKnown RBP10.82□□□□□ -0.68
LDHA-217ENST00000539814 SOS2Q07890 1332 aaPredicted RBP10.82□□□□□ -0.68
LDHA-217ENST00000539814 AEBP1Q8IUX7 1158 aa10.81□□□□□ -0.68
LDHA-217ENST00000539814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.81□□□□□ -0.68
LDHA-217ENST00000539814 NPDC1Q9NQX5 325 aaPredicted RBP10.81□□□□□ -0.68
LDHA-217ENST00000539814 PLSCR2Q9NRY7 297 aa10.81□□□□□ -0.68
LDHA-217ENST00000539814 COG6Q9Y2V7 657 aa10.81□□□□□ -0.68
LDHA-217ENST00000539814 PIK3C2AO00443 1686 aa10.81□□□□□ -0.68
LDHA-217ENST00000539814 ALS2Q96Q42 1657 aa10.81□□□□□ -0.68
LDHA-217ENST00000539814 ANKRD36BQ8N2N9 1353 aa10.8□□□□□ -0.68
LDHA-217ENST00000539814 PUS7Q96PZ0 661 aaKnown RBP10.8□□□□□ -0.68
LDHA-217ENST00000539814 CARD14Q9BXL6 1004 aa10.8□□□□□ -0.68
LDHA-217ENST00000539814 PANK3Q9H999 370 aa10.8□□□□□ -0.68
LDHA-217ENST00000539814 MARF1Q9Y4F3 1742 aaKnown RBP10.8□□□□□ -0.68
LDHA-217ENST00000539814 NINLQ9Y2I6 1382 aa10.79□□□□□ -0.68
LDHA-217ENST00000539814 TNS3Q68CZ2 1445 aa10.79□□□□□ -0.68
LDHA-217ENST00000539814 SSH2Q76I76 1423 aa10.79□□□□□ -0.68
LDHA-217ENST00000539814 NSD3Q9BZ95 1437 aa10.79□□□□□ -0.68
LDHA-217ENST00000539814 EN1Q05925 392 aaPredicted RBP10.79□□□□□ -0.68
LDHA-217ENST00000539814 CNGB1Q14028 1251 aaPredicted RBP10.79□□□□□ -0.68
LDHA-217ENST00000539814 HDGFL2Q7Z4V5 671 aaPredicted RBP10.79□□□□□ -0.68
LDHA-217ENST00000539814 NME9Q86XW9 330 aa10.79□□□□□ -0.68
LDHA-217ENST00000539814 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.79□□□□□ -0.68
LDHA-217ENST00000539814 FAM217BQ9NTX9 383 aaPredicted RBP10.79□□□□□ -0.68
LDHA-217ENST00000539814 KIF20BQ96Q89 1820 aa10.79□□□□□ -0.68
LDHA-217ENST00000539814 ABCA3Q99758 1704 aa10.78□□□□□ -0.68
LDHA-217ENST00000539814 FAM205CA6NFA0 338 aa10.78□□□□□ -0.68
LDHA-217ENST00000539814 MAP3K7O43318 606 aa10.78□□□□□ -0.68
LDHA-217ENST00000539814 MYSM1Q5VVJ2 828 aa10.78□□□□□ -0.68
LDHA-217ENST00000539814 RETREG2Q8NC44 543 aa10.78□□□□□ -0.68
LDHA-217ENST00000539814 CABLES1Q8TDN4 633 aa10.78□□□□□ -0.68
LDHA-217ENST00000539814 TERF2IPQ9NYB0 399 aa10.78□□□□□ -0.68
LDHA-217ENST00000539814 SHPRHQ149N8 1683 aa10.78□□□□□ -0.68
LDHA-217ENST00000539814 SPATA31A3Q5VYP0 1347 aa10.78□□□□□ -0.68
LDHA-217ENST00000539814 TTC21BQ7Z4L5 1316 aa10.78□□□□□ -0.68
LDHA-217ENST00000539814 PNPLA6Q8IY17 1366 aa10.77□□□□□ -0.68
LDHA-217ENST00000539814 LHX6Q9UPM6 363 aa10.77□□□□□ -0.69
LDHA-217ENST00000539814 CRYBG1Q9Y4K1 1723 aa10.77□□□□□ -0.69
LDHA-217ENST00000539814 ERBB3P21860 1342 aa10.77□□□□□ -0.69
LDHA-217ENST00000539814 MED1Q15648 1581 aaPredicted RBP10.77□□□□□ -0.69
LDHA-217ENST00000539814 SBNO1A3KN83 1393 aa10.77□□□□□ -0.69
LDHA-217ENST00000539814 EDC4Q6P2E9 1401 aaKnown RBP10.76□□□□□ -0.69
LDHA-217ENST00000539814 NUTM2BA6NNL0 878 aaPredicted RBP10.76□□□□□ -0.69
LDHA-217ENST00000539814 NUTM2EB1AL46 878 aaPredicted RBP10.76□□□□□ -0.69
LDHA-217ENST00000539814 DDX10Q13206 875 aaKnown RBP10.76□□□□□ -0.69
LDHA-217ENST00000539814 NUTM2AQ8IVF1 878 aaPredicted RBP10.76□□□□□ -0.69
LDHA-217ENST00000539814 ABTB2Q8N961 1025 aa10.76□□□□□ -0.69
LDHA-217ENST00000539814 ZNF330Q9Y3S2 320 aaPredicted RBP10.76□□□□□ -0.69
LDHA-217ENST00000539814 COL22A1Q8NFW1 1626 aaPredicted RBP10.76□□□□□ -0.69
LDHA-217ENST00000539814 PHRF1Q9P1Y6 1649 aaKnown RBP10.76□□□□□ -0.69
LDHA-217ENST00000539814 POTEB3A0JP26 581 aa10.75□□□□□ -0.69
LDHA-217ENST00000539814 CLK2P49760 499 aaKnown RBP10.75□□□□□ -0.69
LDHA-217ENST00000539814 VARS2Q5ST30 1063 aaKnown RBP10.75□□□□□ -0.69
LDHA-217ENST00000539814 POTEBQ6S5H4 581 aa10.75□□□□□ -0.69
LDHA-217ENST00000539814 LRRC59Q96AG4 307 aaKnown RBP10.75□□□□□ -0.69
LDHA-217ENST00000539814 HS3ST6Q96QI5 342 aa10.75□□□□□ -0.69
LDHA-217ENST00000539814 SNRKQ9NRH2 765 aa10.75□□□□□ -0.69
LDHA-217ENST00000539814 LRP6O75581 1613 aa10.75□□□□□ -0.69
LDHA-217ENST00000539814 JCADQ9P266 1359 aa10.75□□□□□ -0.69
LDHA-217ENST00000539814 BANK1Q8NDB2 785 aa10.74□□□□□ -0.69
LDHA-217ENST00000539814 EPAS1Q99814 870 aa10.74□□□□□ -0.69
LDHA-217ENST00000539814 GGNBP2Q9H3C7 697 aa10.74□□□□□ -0.69
LDHA-217ENST00000539814 PHF14O94880 888 aa10.73□□□□□ -0.69
LDHA-217ENST00000539814 RFC5P40937 340 aa10.73□□□□□ -0.69
LDHA-217ENST00000539814 NLRP7Q8WX94 980 aa10.73□□□□□ -0.69
LDHA-217ENST00000539814 ANO8Q9HCE9 1232 aaPredicted RBP10.73□□□□□ -0.69
LDHA-217ENST00000539814 ARHGEF10O15013 1369 aa10.73□□□□□ -0.69
LDHA-217ENST00000539814 ANKRD26Q9UPS8 1709 aa10.72□□□□□ -0.69
LDHA-217ENST00000539814 ADAMTS2O95450 1211 aa10.72□□□□□ -0.69
LDHA-217ENST00000539814 FBLN1P23142 703 aa10.72□□□□□ -0.69
LDHA-217ENST00000539814 FAM161AQ3B820 660 aa10.72□□□□□ -0.69
LDHA-217ENST00000539814 METTL3Q86U44 580 aaKnown RBP10.72□□□□□ -0.69
LDHA-217ENST00000539814 OVOS2A0A0J9YW53 1432 aa10.72□□□□□ -0.69
LDHA-217ENST00000539814 OVOS2Q6IE36 1432 aa10.72□□□□□ -0.69
LDHA-217ENST00000539814 USP54Q70EL1 1684 aa10.72□□□□□ -0.69
LDHA-217ENST00000539814 FYB1O15117 783 aa10.71□□□□□ -0.69
LDHA-217ENST00000539814 PER1O15534 1290 aaPredicted RBP10.71□□□□□ -0.69
LDHA-217ENST00000539814 SLIT3O75094 1523 aa10.71□□□□□ -0.69
LDHA-217ENST00000539814 TSR1Q2NL82 804 aaKnown RBP10.71□□□□□ -0.69
LDHA-217ENST00000539814 CC2D1BQ5T0F9 858 aaKnown RBP10.71□□□□□ -0.69
LDHA-217ENST00000539814 TTC21AQ8NDW8 1320 aa10.71□□□□□ -0.69
LDHA-217ENST00000539814 BRD4O60885 1362 aaPredicted RBP10.7□□□□□ -0.7
LDHA-217ENST00000539814 USP19O94966 1318 aa10.7□□□□□ -0.7
LDHA-217ENST00000539814 TNNT2P45379 298 aaPredicted RBP10.7□□□□□ -0.7
LDHA-217ENST00000539814 TBC1D2Q9BYX2 928 aa10.7□□□□□ -0.7
LDHA-217ENST00000539814 KNSTRNQ9Y448 316 aa10.7□□□□□ -0.7
LDHA-217ENST00000539814 LTN1O94822 1766 aa10.7□□□□□ -0.7
LDHA-217ENST00000539814 NFAT5O94916 1531 aa10.69□□□□□ -0.7
LDHA-217ENST00000539814 USP31Q70CQ4 1352 aa10.69□□□□□ -0.7
LDHA-217ENST00000539814 CGNL1Q0VF96 1302 aa10.69□□□□□ -0.7
LDHA-217ENST00000539814 OATP04181 439 aa10.69□□□□□ -0.7
LDHA-217ENST00000539814 ZC3H6P61129 1189 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms