RNA–Protein interactions for RNA: ENST00000539649.1

PGA3-205, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2

Gene PGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-205ENST00000539649 MTHFSDQ2M296 383 aaKnown RBP13.26□□□□□ -0.29
PGA3-205ENST00000539649 AKAP4Q5JQC9 854 aa13.26□□□□□ -0.29
PGA3-205ENST00000539649 ATG3Q9NT62 314 aa13.26□□□□□ -0.29
PGA3-205ENST00000539649 UTRNP46939 3433 aa13.25□□□□□ -0.29
PGA3-205ENST00000539649 MRC1P22897 1456 aa13.25□□□□□ -0.29
PGA3-205ENST00000539649 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
PGA3-205ENST00000539649 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
PGA3-205ENST00000539649 POLD1P28340 1107 aa13.25□□□□□ -0.29
PGA3-205ENST00000539649 SIK1P57059 783 aa13.25□□□□□ -0.29
PGA3-205ENST00000539649 AMIGO3Q86WK7 504 aa13.25□□□□□ -0.29
PGA3-205ENST00000539649 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
PGA3-205ENST00000539649 RSPH6AQ9H0K4 717 aa13.25□□□□□ -0.29
PGA3-205ENST00000539649 C4BP0C0L5 1744 aa13.25□□□□□ -0.29
PGA3-205ENST00000539649 CABP4P57796 275 aa13.24□□□□□ -0.29
PGA3-205ENST00000539649 NUDCQ9Y266 331 aa13.24□□□□□ -0.29
PGA3-205ENST00000539649 VIRMAQ69YN4 1812 aaKnown RBP13.24□□□□□ -0.29
PGA3-205ENST00000539649 ZNF831Q5JPB2 1677 aa13.24□□□□□ -0.29
PGA3-205ENST00000539649 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
PGA3-205ENST00000539649 YY1P25490 414 aa13.23□□□□□ -0.29
PGA3-205ENST00000539649 ITPK1Q13572 414 aa13.23□□□□□ -0.29
PGA3-205ENST00000539649 RALBP1Q15311 655 aa13.23□□□□□ -0.29
PGA3-205ENST00000539649 NFATC2IPQ8NCF5 419 aa13.23□□□□□ -0.29
PGA3-205ENST00000539649 LINC00116Q8NCU8 138 aa13.23□□□□□ -0.29
PGA3-205ENST00000539649 PHACTR3Q96KR7 559 aa13.23□□□□□ -0.29
PGA3-205ENST00000539649 LGR6Q9HBX8 967 aa13.23□□□□□ -0.29
PGA3-205ENST00000539649 U2AF1L5P0DN76 240 aaPredicted RBP13.22□□□□□ -0.29
PGA3-205ENST00000539649 PRKAR2BP31323 418 aa13.22□□□□□ -0.29
PGA3-205ENST00000539649 U2AF1Q01081 240 aaKnown RBP eCLIP13.22□□□□□ -0.29
PGA3-205ENST00000539649 SLC4A9Q96Q91 983 aa13.22□□□□□ -0.29
PGA3-205ENST00000539649 FCHSD2O94868 740 aa13.21□□□□□ -0.29
PGA3-205ENST00000539649 SSFA2P28290 1259 aa13.21□□□□□ -0.29
PGA3-205ENST00000539649 AK7Q96M32 723 aa13.21□□□□□ -0.29
PGA3-205ENST00000539649 SLC52A2Q9HAB3 445 aa13.21□□□□□ -0.29
PGA3-205ENST00000539649 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.3
PGA3-205ENST00000539649 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.2□□□□□ -0.3
PGA3-205ENST00000539649 MSH5O43196 834 aa13.2□□□□□ -0.3
PGA3-205ENST00000539649 ATP6V1AP38606 617 aa13.2□□□□□ -0.3
PGA3-205ENST00000539649 GAS2L2Q8NHY3 880 aa13.2□□□□□ -0.3
PGA3-205ENST00000539649 CICQ96RK0 1608 aaPredicted RBP13.2□□□□□ -0.3
PGA3-205ENST00000539649 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
PGA3-205ENST00000539649 NLGN2Q8NFZ4 835 aa13.19□□□□□ -0.3
PGA3-205ENST00000539649 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
PGA3-205ENST00000539649 SIPA1L3O60292 1781 aaPredicted RBP13.18□□□□□ -0.3
PGA3-205ENST00000539649 GNAT3A8MTJ3 354 aa13.18□□□□□ -0.3
PGA3-205ENST00000539649 MSL1Q68DK7 614 aa13.18□□□□□ -0.3
PGA3-205ENST00000539649 SMIM5Q71RC9 77 aa13.18□□□□□ -0.3
PGA3-205ENST00000539649 IL17REQ8NFR9 667 aa13.18□□□□□ -0.3
PGA3-205ENST00000539649 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
PGA3-205ENST00000539649 TJP1Q07157 1748 aa13.18□□□□□ -0.3
PGA3-205ENST00000539649 CEMIPQ8WUJ3 1361 aa13.18□□□□□ -0.3
PGA3-205ENST00000539649 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
PGA3-205ENST00000539649 PTCD1O75127 700 aaKnown RBP13.17□□□□□ -0.3
PGA3-205ENST00000539649 RC3H1Q5TC82 1133 aaKnown RBP13.17□□□□□ -0.3
PGA3-205ENST00000539649 CD2APQ9Y5K6 639 aa13.17□□□□□ -0.3
PGA3-205ENST00000539649 UBR2Q8IWV8 1755 aa13.17□□□□□ -0.3
PGA3-205ENST00000539649 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
PGA3-205ENST00000539649 GNPATO15228 680 aa13.16□□□□□ -0.3
PGA3-205ENST00000539649 PHF14O94880 888 aa13.16□□□□□ -0.3
PGA3-205ENST00000539649 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
PGA3-205ENST00000539649 SLC39A6Q13433 755 aa13.15□□□□□ -0.3
PGA3-205ENST00000539649 PLEKHF1Q96S99 279 aa13.15□□□□□ -0.3
PGA3-205ENST00000539649 PRKRIP1Q9H875 184 aaPredicted RBP13.15□□□□□ -0.3
PGA3-205ENST00000539649 ADRA2BP18089 450 aa13.14□□□□□ -0.31
PGA3-205ENST00000539649 GPR162Q16538 588 aa13.14□□□□□ -0.31
PGA3-205ENST00000539649 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
PGA3-205ENST00000539649 ZNF316A6NFI3 1004 aaPredicted RBP13.13□□□□□ -0.31
PGA3-205ENST00000539649 RPS6KA4O75676 772 aa13.13□□□□□ -0.31
PGA3-205ENST00000539649 TEFQ10587 303 aa13.13□□□□□ -0.31
PGA3-205ENST00000539649 TRAPPC3LQ5T215 181 aa13.13□□□□□ -0.31
PGA3-205ENST00000539649 RTCBQ9Y3I0 505 aaKnown RBP13.13□□□□□ -0.31
PGA3-205ENST00000539649 DLG5Q8TDM6 1919 aa13.12□□□□□ -0.31
PGA3-205ENST00000539649 HTATSF1O43719 755 aaKnown RBP13.12□□□□□ -0.31
PGA3-205ENST00000539649 YBX3P16989 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
PGA3-205ENST00000539649 CRKLP46109 303 aaKnown RBP13.12□□□□□ -0.31
PGA3-205ENST00000539649 MCM10Q7L590 875 aa13.12□□□□□ -0.31
PGA3-205ENST00000539649 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
PGA3-205ENST00000539649 ZNF784Q8NCA9 323 aaPredicted RBP13.12□□□□□ -0.31
PGA3-205ENST00000539649 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
PGA3-205ENST00000539649 GOLGB1Q14789 3259 aaKnown RBP13.12□□□□□ -0.31
PGA3-205ENST00000539649 ZNF790Q6PG37 636 aa13.11□□□□□ -0.31
PGA3-205ENST00000539649 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
PGA3-205ENST00000539649 GRIN3BO60391 1043 aa13.1□□□□□ -0.31
PGA3-205ENST00000539649 CYP19A1P11511 503 aaPredicted RBP13.1□□□□□ -0.31
PGA3-205ENST00000539649 GYS1P13807 737 aa13.1□□□□□ -0.31
PGA3-205ENST00000539649 DCTN1Q14203 1278 aa13.1□□□□□ -0.31
PGA3-205ENST00000539649 NFE2L2Q16236 605 aa13.1□□□□□ -0.31
PGA3-205ENST00000539649 INTS5Q6P9B9 1019 aaKnown RBP13.1□□□□□ -0.31
PGA3-205ENST00000539649 TTC5Q8N0Z6 440 aa13.1□□□□□ -0.31
PGA3-205ENST00000539649 VSIG10Q8N0Z9 540 aa13.1□□□□□ -0.31
PGA3-205ENST00000539649 NLGN1Q8N2Q7 840 aa13.1□□□□□ -0.31
PGA3-205ENST00000539649 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
PGA3-205ENST00000539649 ZNF496Q96IT1 587 aaPredicted RBP13.1□□□□□ -0.31
PGA3-205ENST00000539649 NEFMP07197 916 aa13.09□□□□□ -0.31
PGA3-205ENST00000539649 MMP10P09238 476 aa13.09□□□□□ -0.31
PGA3-205ENST00000539649 PNNQ9H307 717 aaKnown RBP13.09□□□□□ -0.31
PGA3-205ENST00000539649 CCDC87Q9NVE4 849 aa13.09□□□□□ -0.31
PGA3-205ENST00000539649 HEG1Q9ULI3 1381 aa13.08□□□□□ -0.31
PGA3-205ENST00000539649 BTBD11A6QL63 1104 aa13.08□□□□□ -0.32
PGA3-205ENST00000539649 KCNQ3O43525 872 aa13.08□□□□□ -0.32
PGA3-205ENST00000539649 MAPK8IP3Q9UPT6 1336 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms