RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ZSCAN29Q8IWY8 852 aaPredicted RBP7.61□□□□□ -1.19
LSAMP-207ENST00000539563 RAI14Q9P0K7 980 aa7.61□□□□□ -1.19
LSAMP-207ENST00000539563 H0YHG0 523 aa7.6□□□□□ -1.19
LSAMP-207ENST00000539563 ZNF76P36508 570 aa7.6□□□□□ -1.19
LSAMP-207ENST00000539563 STK11IPQ8N1F8 1099 aa7.6□□□□□ -1.19
LSAMP-207ENST00000539563 GRPEL1Q9HAV7 217 aa7.6□□□□□ -1.19
LSAMP-207ENST00000539563 AIDAQ96BJ3 306 aa7.6□□□□□ -1.19
LSAMP-207ENST00000539563 HYPKQ9NX55 129 aa7.6□□□□□ -1.19
LSAMP-207ENST00000539563 RAPGEF6Q8TEU7 1601 aa7.6□□□□□ -1.19
LSAMP-207ENST00000539563 MPHOSPH10O00566 681 aaKnown RBP7.6□□□□□ -1.19
LSAMP-207ENST00000539563 TMOD3Q9NYL9 352 aa7.6□□□□□ -1.19
LSAMP-207ENST00000539563 ERLIN1O75477 346 aa7.6□□□□□ -1.19
LSAMP-207ENST00000539563 IFIT1P09914 478 aaKnown RBP7.6□□□□□ -1.19
LSAMP-207ENST00000539563 CASTP20810 708 aaKnown RBP7.6□□□□□ -1.19
LSAMP-207ENST00000539563 TNIP1Q15025 636 aa7.6□□□□□ -1.19
LSAMP-207ENST00000539563 TMOD2Q9NZR1 351 aa7.6□□□□□ -1.19
LSAMP-207ENST00000539563 THOC2Q8NI27 1593 aaKnown RBP7.6□□□□□ -1.19
LSAMP-207ENST00000539563 EIF2AK4Q9P2K8 1649 aaKnown RBP7.6□□□□□ -1.19
LSAMP-207ENST00000539563 NCOA1Q15788 1441 aa7.6□□□□□ -1.19
LSAMP-207ENST00000539563 SEC63Q9UGP8 760 aaKnown RBP7.6□□□□□ -1.19
LSAMP-207ENST00000539563 GRIN2AQ12879 1464 aa7.59□□□□□ -1.19
LSAMP-207ENST00000539563 FGFR1OPO95684 399 aaKnown RBP7.59□□□□□ -1.19
LSAMP-207ENST00000539563 MAP3K11Q16584 847 aa7.59□□□□□ -1.19
LSAMP-207ENST00000539563 IL27Q8NEV9 243 aa7.59□□□□□ -1.19
LSAMP-207ENST00000539563 ZPR1O75312 459 aa7.59□□□□□ -1.19
LSAMP-207ENST00000539563 AXDND1Q5T1B0 1012 aaPredicted RBP7.59□□□□□ -1.19
LSAMP-207ENST00000539563 SLF2Q8IX21 1173 aa7.59□□□□□ -1.19
LSAMP-207ENST00000539563 SH2B1Q9NRF2 756 aaPredicted RBP7.59□□□□□ -1.19
LSAMP-207ENST00000539563 ABCC5O15440 1437 aa7.59□□□□□ -1.19
LSAMP-207ENST00000539563 SCAF11Q99590 1463 aaKnown RBP7.59□□□□□ -1.19
LSAMP-207ENST00000539563 UPF3BQ9BZI7 483 aaKnown RBP7.59□□□□□ -1.19
LSAMP-207ENST00000539563 PHAXQ9H814 394 aaKnown RBP7.59□□□□□ -1.19
LSAMP-207ENST00000539563 IDH1O75874 414 aaKnown RBP7.59□□□□□ -1.19
LSAMP-207ENST00000539563 TTC21BQ7Z4L5 1316 aa7.59□□□□□ -1.19
LSAMP-207ENST00000539563 MCM4P33991 863 aa7.59□□□□□ -1.19
LSAMP-207ENST00000539563 PAF1Q8N7H5 531 aa7.59□□□□□ -1.19
LSAMP-207ENST00000539563 USP5P45974 858 aa7.58□□□□□ -1.2
LSAMP-207ENST00000539563 IL1RAPL2Q9NP60 686 aa7.58□□□□□ -1.2
LSAMP-207ENST00000539563 PPP1R12BO60237 982 aaPredicted RBP7.58□□□□□ -1.2
LSAMP-207ENST00000539563 POTEJP0CG39 1038 aa7.58□□□□□ -1.2
LSAMP-207ENST00000539563 JAKMIP3Q5VZ66 844 aa7.58□□□□□ -1.2
LSAMP-207ENST00000539563 KIAA1328Q86T90 577 aa7.58□□□□□ -1.2
LSAMP-207ENST00000539563 CCDC112Q8NEF3 446 aa7.58□□□□□ -1.2
LSAMP-207ENST00000539563 CTAGE5O15320 804 aa7.58□□□□□ -1.2
LSAMP-207ENST00000539563 MKNK2Q9HBH9 465 aa7.58□□□□□ -1.2
LSAMP-207ENST00000539563 FBXO3Q9UK99 471 aa7.58□□□□□ -1.2
LSAMP-207ENST00000539563 SLC5A1P13866 664 aa7.58□□□□□ -1.2
LSAMP-207ENST00000539563 GBP2P32456 591 aaPredicted RBP7.58□□□□□ -1.2
LSAMP-207ENST00000539563 MATR3P43243 847 aaKnown RBP eCLIP7.58□□□□□ -1.2
LSAMP-207ENST00000539563 MAP3K12Q12852 859 aa7.58□□□□□ -1.2
LSAMP-207ENST00000539563 EPB41L2O43491 1005 aaKnown RBP7.58□□□□□ -1.2
LSAMP-207ENST00000539563 ZC3H6P61129 1189 aaKnown RBP7.58□□□□□ -1.2
LSAMP-207ENST00000539563 PPP1R1BQ9UD71 204 aaPredicted RBP7.58□□□□□ -1.2
LSAMP-207ENST00000539563 CFAP65Q6ZU64 1925 aaKnown RBP7.58□□□□□ -1.2
LSAMP-207ENST00000539563 MX1P20591 662 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 CCDC148Q8NFR7 591 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 MYD88Q99836 296 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 RAB34Q9BZG1 259 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 NAPBQ9H115 298 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 DHX29Q7Z478 1369 aaKnown RBP7.57□□□□□ -1.2
LSAMP-207ENST00000539563 POLR3DP05423 398 aaPredicted RBP7.57□□□□□ -1.2
LSAMP-207ENST00000539563 RARSP54136 660 aaKnown RBP7.57□□□□□ -1.2
LSAMP-207ENST00000539563 IFIT5Q13325 482 aaKnown RBP7.57□□□□□ -1.2
LSAMP-207ENST00000539563 SKIDA1Q1XH10 827 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 TSG101Q99816 390 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 ABCF2Q9UG63 623 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 KIF21AQ7Z4S6 1674 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 KIF2AO00139 706 aaPredicted RBP7.57□□□□□ -1.2
LSAMP-207ENST00000539563 IQCA1Q86XH1 822 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 ZNF213O14771 459 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 TEX13AQ9BXU3 409 aaPredicted RBP7.57□□□□□ -1.2
LSAMP-207ENST00000539563 BCL11BQ9C0K0 894 aaPredicted RBP7.57□□□□□ -1.2
LSAMP-207ENST00000539563 RNF41Q9H4P4 317 aaPredicted RBP7.57□□□□□ -1.2
LSAMP-207ENST00000539563 ANO10Q9NW15 660 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 CCDC183Q5T5S1 534 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 WAPLQ7Z5K2 1190 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 CETN2P41208 172 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 EIF5P55010 431 aaKnown RBP7.57□□□□□ -1.2
LSAMP-207ENST00000539563 EHMT1Q9H9B1 1298 aa7.57□□□□□ -1.2
LSAMP-207ENST00000539563 GOLGA6L7A0A1B0GV03 622 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 EXOC6BQ9Y2D4 811 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 WASLO00401 505 aaPredicted RBP7.56□□□□□ -1.2
LSAMP-207ENST00000539563 KIAA0754O94854 1291 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 SSBP05455 408 aaKnown RBP eCLIP7.56□□□□□ -1.2
LSAMP-207ENST00000539563 NUTM1Q86Y26 1132 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 ZNF444Q8N0Y2 327 aaPredicted RBP7.56□□□□□ -1.2
LSAMP-207ENST00000539563 DBF4Q9UBU7 674 aaPredicted RBP7.56□□□□□ -1.2
LSAMP-207ENST00000539563 PLB1Q6P1J6 1458 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 RPRD2Q5VT52 1461 aaKnown RBP7.56□□□□□ -1.2
LSAMP-207ENST00000539563 DZIP1Q86YF9 867 aaKnown RBP7.56□□□□□ -1.2
LSAMP-207ENST00000539563 SCAND2PQ9GZW5 306 aaPredicted RBP7.56□□□□□ -1.2
LSAMP-207ENST00000539563 TSPYL1Q9H0U9 437 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 DUOX2Q9NRD8 1548 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 MCM3P25205 808 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 TTF1Q15361 905 aaPredicted RBP7.56□□□□□ -1.2
LSAMP-207ENST00000539563 MCM10Q7L590 875 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 EVI5LQ96CN4 794 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 A0A087WZG4 1122 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 SSRP1Q08945 709 aaKnown RBP7.56□□□□□ -1.2
LSAMP-207ENST00000539563 TAF4BQ92750 862 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms