RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 ATRNO75882 1429 aa13.11□□□□□ -0.31
GTF2H3-207ENST00000539429 LHX6Q9UPM6 363 aa13.1□□□□□ -0.31
GTF2H3-207ENST00000539429 EDC4Q6P2E9 1401 aaKnown RBP13.1□□□□□ -0.31
GTF2H3-207ENST00000539429 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
GTF2H3-207ENST00000539429 USP19O94966 1318 aa13.1□□□□□ -0.31
GTF2H3-207ENST00000539429 MAP3K7O43318 606 aa13.09□□□□□ -0.31
GTF2H3-207ENST00000539429 CD163L1Q9NR16 1453 aa13.09□□□□□ -0.31
GTF2H3-207ENST00000539429 CDK12Q9NYV4 1490 aaPredicted RBP13.09□□□□□ -0.31
GTF2H3-207ENST00000539429 SSH2Q76I76 1423 aa13.08□□□□□ -0.32
GTF2H3-207ENST00000539429 FCHSD2O94868 740 aa13.08□□□□□ -0.32
GTF2H3-207ENST00000539429 VPS72Q15906 364 aa13.08□□□□□ -0.32
GTF2H3-207ENST00000539429 NME9Q86XW9 330 aa13.08□□□□□ -0.32
GTF2H3-207ENST00000539429 ZDHHC16Q969W1 377 aa13.08□□□□□ -0.32
GTF2H3-207ENST00000539429 ANKRD36BQ8N2N9 1353 aa13.07□□□□□ -0.32
GTF2H3-207ENST00000539429 LTN1O94822 1766 aa13.07□□□□□ -0.32
GTF2H3-207ENST00000539429 RGPD5Q99666 1765 aa13.07□□□□□ -0.32
GTF2H3-207ENST00000539429 KIF20BQ96Q89 1820 aa13.07□□□□□ -0.32
GTF2H3-207ENST00000539429 SLC24A3Q9HC58 644 aa13.07□□□□□ -0.32
GTF2H3-207ENST00000539429 SLIT3O75094 1523 aa13.07□□□□□ -0.32
GTF2H3-207ENST00000539429 RGS12O14924 1447 aa13.06□□□□□ -0.32
GTF2H3-207ENST00000539429 MYOM1P52179 1685 aa13.06□□□□□ -0.32
GTF2H3-207ENST00000539429 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
GTF2H3-207ENST00000539429 COG3Q96JB2 828 aa13.06□□□□□ -0.32
GTF2H3-207ENST00000539429 USP35Q9P2H5 1018 aa13.06□□□□□ -0.32
GTF2H3-207ENST00000539429 GLI3P10071 1580 aa13.06□□□□□ -0.32
GTF2H3-207ENST00000539429 BRWD3Q6RI45 1802 aa13.06□□□□□ -0.32
GTF2H3-207ENST00000539429 CPDO75976 1380 aa13.06□□□□□ -0.32
GTF2H3-207ENST00000539429 PTGDRQ13258 359 aa13.05□□□□□ -0.32
GTF2H3-207ENST00000539429 HIC1Q14526 733 aa13.05□□□□□ -0.32
GTF2H3-207ENST00000539429 CSB-PGBD3P0DP91 1061 aa13.04□□□□□ -0.32
GTF2H3-207ENST00000539429 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
GTF2H3-207ENST00000539429 TSR1Q2NL82 804 aaKnown RBP13.04□□□□□ -0.32
GTF2H3-207ENST00000539429 KRI1Q8N9T8 703 aaKnown RBP13.04□□□□□ -0.32
GTF2H3-207ENST00000539429 CDHR5Q9HBB8 845 aa13.04□□□□□ -0.32
GTF2H3-207ENST00000539429 USP54Q70EL1 1684 aa13.04□□□□□ -0.32
GTF2H3-207ENST00000539429 CAMTA1Q9Y6Y1 1673 aa13.03□□□□□ -0.32
GTF2H3-207ENST00000539429 GNPATO15228 680 aa13.03□□□□□ -0.32
GTF2H3-207ENST00000539429 PPP4R3BQ5MIZ7 849 aa13.03□□□□□ -0.32
GTF2H3-207ENST00000539429 USP31Q70CQ4 1352 aa13.03□□□□□ -0.32
GTF2H3-207ENST00000539429 LMO7Q8WWI1 1683 aa13.02□□□□□ -0.32
GTF2H3-207ENST00000539429 SEPT12Q8IYM1 358 aa13.02□□□□□ -0.33
GTF2H3-207ENST00000539429 ADAM33Q9BZ11 813 aa13.02□□□□□ -0.33
GTF2H3-207ENST00000539429 GGNBP2Q9H3C7 697 aa13.02□□□□□ -0.33
GTF2H3-207ENST00000539429 C6orf132Q5T0Z8 1188 aa13.01□□□□□ -0.33
GTF2H3-207ENST00000539429 LARP1Q6PKG0 1096 aaKnown RBP13.01□□□□□ -0.33
GTF2H3-207ENST00000539429 TOM1L2Q6ZVM7 507 aa13.01□□□□□ -0.33
GTF2H3-207ENST00000539429 ARHGEF25Q86VW2 580 aa13.01□□□□□ -0.33
GTF2H3-207ENST00000539429 NPDC1Q9NQX5 325 aaPredicted RBP13.01□□□□□ -0.33
GTF2H3-207ENST00000539429 SPATA31A5Q5VU36 1347 aa13.01□□□□□ -0.33
GTF2H3-207ENST00000539429 SPATA31A7Q8IWB4 1347 aa13.01□□□□□ -0.33
GTF2H3-207ENST00000539429 AATKQ6ZMQ8 1374 aa13.01□□□□□ -0.33
GTF2H3-207ENST00000539429 NSD3Q9BZ95 1437 aa13.01□□□□□ -0.33
GTF2H3-207ENST00000539429 COL18A1P39060 1754 aa13□□□□□ -0.33
GTF2H3-207ENST00000539429 NFAT5O94916 1531 aa13□□□□□ -0.33
GTF2H3-207ENST00000539429 COL5A2P05997 1499 aaPredicted RBP12.99□□□□□ -0.33
GTF2H3-207ENST00000539429 OVOS2A0A0J9YW53 1432 aa12.99□□□□□ -0.33
GTF2H3-207ENST00000539429 OVOS2Q6IE36 1432 aa12.99□□□□□ -0.33
GTF2H3-207ENST00000539429 SPATA31A1Q5TZJ5 1347 aa12.99□□□□□ -0.33
GTF2H3-207ENST00000539429 AMPHP49418 695 aa12.99□□□□□ -0.33
GTF2H3-207ENST00000539429 AK7Q96M32 723 aa12.99□□□□□ -0.33
GTF2H3-207ENST00000539429 CRB1P82279 1406 aa12.98□□□□□ -0.33
GTF2H3-207ENST00000539429 FYB1O15117 783 aa12.98□□□□□ -0.33
GTF2H3-207ENST00000539429 ST18O60284 1047 aa12.98□□□□□ -0.33
GTF2H3-207ENST00000539429 KRT27Q7Z3Y8 459 aa12.98□□□□□ -0.33
GTF2H3-207ENST00000539429 TCP11L2Q8N4U5 519 aa12.98□□□□□ -0.33
GTF2H3-207ENST00000539429 CGNL1Q0VF96 1302 aa12.97□□□□□ -0.33
GTF2H3-207ENST00000539429 MAP2K5Q13163 448 aa12.97□□□□□ -0.33
GTF2H3-207ENST00000539429 LTV1Q96GA3 475 aaPredicted RBP12.97□□□□□ -0.33
GTF2H3-207ENST00000539429 PANK3Q9H999 370 aa12.97□□□□□ -0.33
GTF2H3-207ENST00000539429 AXIN2Q9Y2T1 843 aa12.97□□□□□ -0.33
GTF2H3-207ENST00000539429 MAP2P11137 1827 aaKnown RBP12.97□□□□□ -0.33
GTF2H3-207ENST00000539429 WDR17Q8IZU2 1322 aa12.96□□□□□ -0.33
GTF2H3-207ENST00000539429 C11orf95C9JLR9 678 aaPredicted RBP12.96□□□□□ -0.33
GTF2H3-207ENST00000539429 ONECUT3O60422 494 aaPredicted RBP12.96□□□□□ -0.33
GTF2H3-207ENST00000539429 FECHP22830 423 aa12.96□□□□□ -0.33
GTF2H3-207ENST00000539429 PDE3BQ13370 1112 aa12.96□□□□□ -0.33
GTF2H3-207ENST00000539429 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.33
GTF2H3-207ENST00000539429 CARD14Q9BXL6 1004 aa12.96□□□□□ -0.33
GTF2H3-207ENST00000539429 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.33
GTF2H3-207ENST00000539429 NLRP2Q9NX02 1062 aa12.96□□□□□ -0.33
GTF2H3-207ENST00000539429 THRAP3Q9Y2W1 955 aaKnown RBP12.96□□□□□ -0.33
GTF2H3-207ENST00000539429 ANKRD26Q9UPS8 1709 aa12.96□□□□□ -0.34
GTF2H3-207ENST00000539429 ABCC6O95255 1503 aa12.95□□□□□ -0.34
GTF2H3-207ENST00000539429 KNSTRNQ9Y448 316 aa12.95□□□□□ -0.34
GTF2H3-207ENST00000539429 WNK3Q9BYP7 1800 aa12.95□□□□□ -0.34
GTF2H3-207ENST00000539429 KIF7Q2M1P5 1343 aa12.94□□□□□ -0.34
GTF2H3-207ENST00000539429 THSD7AQ9UPZ6 1657 aa12.94□□□□□ -0.34
GTF2H3-207ENST00000539429 PPM1GO15355 546 aaPredicted RBP12.94□□□□□ -0.34
GTF2H3-207ENST00000539429 FBLN1P23142 703 aa12.94□□□□□ -0.34
GTF2H3-207ENST00000539429 RRS1Q15050 365 aaKnown RBP12.94□□□□□ -0.34
GTF2H3-207ENST00000539429 ANKRD24Q8TF21 1146 aa12.94□□□□□ -0.34
GTF2H3-207ENST00000539429 IP6K1Q92551 441 aa12.94□□□□□ -0.34
GTF2H3-207ENST00000539429 KAT6BQ8WYB5 2073 aa12.93□□□□□ -0.34
GTF2H3-207ENST00000539429 FAM208AQ9UK61 1670 aaKnown RBP12.93□□□□□ -0.34
GTF2H3-207ENST00000539429 IRF6O14896 467 aa12.93□□□□□ -0.34
GTF2H3-207ENST00000539429 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
GTF2H3-207ENST00000539429 BLMP54132 1417 aaPredicted RBP12.93□□□□□ -0.34
GTF2H3-207ENST00000539429 PARP4Q9UKK3 1724 aaKnown RBP12.93□□□□□ -0.34
GTF2H3-207ENST00000539429 MAP3K19Q56UN5 1328 aa12.92□□□□□ -0.34
GTF2H3-207ENST00000539429 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms