RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 RTF1Q92541 710 aaKnown RBP11.36□□□□□ -0.59
DDB1-213ENST00000539332 CRBNQ96SW2 442 aa11.36□□□□□ -0.59
DDB1-213ENST00000539332 SPG7Q9UQ90 795 aa11.36□□□□□ -0.59
DDB1-213ENST00000539332 DISP2A7MBM2 1401 aa11.35□□□□□ -0.59
DDB1-213ENST00000539332 CEMIPQ8WUJ3 1361 aa11.35□□□□□ -0.59
DDB1-213ENST00000539332 SPATA31A5Q5VU36 1347 aa11.35□□□□□ -0.59
DDB1-213ENST00000539332 SPATA31A7Q8IWB4 1347 aa11.35□□□□□ -0.59
DDB1-213ENST00000539332 AKAP4Q5JQC9 854 aa11.35□□□□□ -0.59
DDB1-213ENST00000539332 N4BP2Q86UW6 1770 aaPredicted RBP11.35□□□□□ -0.59
DDB1-213ENST00000539332 C1orf141Q5JVX7 400 aa11.34□□□□□ -0.59
DDB1-213ENST00000539332 B4GALNT3Q6L9W6 998 aa11.34□□□□□ -0.59
DDB1-213ENST00000539332 USP21Q9UK80 565 aa11.34□□□□□ -0.59
DDB1-213ENST00000539332 VPS72Q15906 364 aa11.33□□□□□ -0.59
DDB1-213ENST00000539332 IL17REQ8NFR9 667 aa11.33□□□□□ -0.59
DDB1-213ENST00000539332 ZCRB1Q8TBF4 217 aaKnown RBP11.33□□□□□ -0.59
DDB1-213ENST00000539332 THRAP3Q9Y2W1 955 aaKnown RBP11.33□□□□□ -0.59
DDB1-213ENST00000539332 KAT6BQ8WYB5 2073 aa11.33□□□□□ -0.59
DDB1-213ENST00000539332 AFF2P51816 1311 aa11.33□□□□□ -0.6
DDB1-213ENST00000539332 CYP27B1O15528 508 aa11.33□□□□□ -0.6
DDB1-213ENST00000539332 VAMP4O75379 141 aa11.33□□□□□ -0.6
DDB1-213ENST00000539332 PHKG2P15735 406 aa11.33□□□□□ -0.6
DDB1-213ENST00000539332 SSH1Q8WYL5 1049 aa11.33□□□□□ -0.6
DDB1-213ENST00000539332 BABAM1Q9NWV8 329 aa11.33□□□□□ -0.6
DDB1-213ENST00000539332 CCDC9Q9Y3X0 531 aaKnown RBP11.33□□□□□ -0.6
DDB1-213ENST00000539332 PCDH11XQ9BZA7 1347 aa11.32□□□□□ -0.6
DDB1-213ENST00000539332 PCDH11YQ9BZA8 1340 aa11.32□□□□□ -0.6
DDB1-213ENST00000539332 MPRIPQ6WCQ1 1025 aa11.32□□□□□ -0.6
DDB1-213ENST00000539332 IFNL2Q8IZJ0 200 aa11.32□□□□□ -0.6
DDB1-213ENST00000539332 CCDC136Q96JN2 1154 aa11.32□□□□□ -0.6
DDB1-213ENST00000539332 KIF16BQ96L93 1317 aa11.32□□□□□ -0.6
DDB1-213ENST00000539332 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
DDB1-213ENST00000539332 CDCA7Q9BWT1 371 aaPredicted RBP11.31□□□□□ -0.6
DDB1-213ENST00000539332 LGR6Q9HBX8 967 aa11.31□□□□□ -0.6
DDB1-213ENST00000539332 LAS1LQ9Y4W2 734 aaKnown RBP11.31□□□□□ -0.6
DDB1-213ENST00000539332 ANP32AP39687 249 aaKnown RBP11.31□□□□□ -0.6
DDB1-213ENST00000539332 AAMPQ13685 434 aa11.31□□□□□ -0.6
DDB1-213ENST00000539332 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
DDB1-213ENST00000539332 SMC4Q9NTJ3 1288 aa11.31□□□□□ -0.6
DDB1-213ENST00000539332 KDM6AO15550 1401 aaPredicted RBP11.31□□□□□ -0.6
DDB1-213ENST00000539332 MRC1P22897 1456 aa11.3□□□□□ -0.6
DDB1-213ENST00000539332 RNMTO43148 476 aaKnown RBP11.3□□□□□ -0.6
DDB1-213ENST00000539332 RTL5Q5HYW3 569 aaPredicted RBP11.3□□□□□ -0.6
DDB1-213ENST00000539332 C8orf58Q8NAV2 365 aa11.3□□□□□ -0.6
DDB1-213ENST00000539332 GLI3P10071 1580 aa11.29□□□□□ -0.6
DDB1-213ENST00000539332 ATRNO75882 1429 aa11.29□□□□□ -0.6
DDB1-213ENST00000539332 TNS2Q63HR2 1409 aa11.29□□□□□ -0.6
DDB1-213ENST00000539332 HSP90AB1P08238 724 aaKnown RBP11.29□□□□□ -0.6
DDB1-213ENST00000539332 MS4A1P11836 297 aa11.29□□□□□ -0.6
DDB1-213ENST00000539332 RLBP1P12271 317 aa11.29□□□□□ -0.6
DDB1-213ENST00000539332 TWISTNBQ3B726 338 aaPredicted RBP11.29□□□□□ -0.6
DDB1-213ENST00000539332 ZKSCAN2Q63HK3 967 aa11.29□□□□□ -0.6
DDB1-213ENST00000539332 DDX54Q8TDD1 881 aaKnown RBP11.29□□□□□ -0.6
DDB1-213ENST00000539332 BCL2L13Q9BXK5 485 aa11.29□□□□□ -0.6
DDB1-213ENST00000539332 SOS1Q07889 1333 aaPredicted RBP11.29□□□□□ -0.6
DDB1-213ENST00000539332 EXOC5O00471 708 aa11.28□□□□□ -0.6
DDB1-213ENST00000539332 TAF7Q15545 349 aaPredicted RBP11.28□□□□□ -0.6
DDB1-213ENST00000539332 DCAF5Q96JK2 942 aa11.28□□□□□ -0.6
DDB1-213ENST00000539332 TRIM27P14373 513 aa11.28□□□□□ -0.6
DDB1-213ENST00000539332 CANXP27824 592 aaKnown RBP11.28□□□□□ -0.6
DDB1-213ENST00000539332 TEFQ10587 303 aa11.28□□□□□ -0.6
DDB1-213ENST00000539332 NKX1-1Q15270 411 aaPredicted RBP11.28□□□□□ -0.6
DDB1-213ENST00000539332 FAM98CQ17RN3 349 aaKnown RBP11.28□□□□□ -0.6
DDB1-213ENST00000539332 ATF7IPQ6VMQ6 1270 aa11.28□□□□□ -0.6
DDB1-213ENST00000539332 MRPL50Q8N5N7 158 aaKnown RBP11.28□□□□□ -0.6
DDB1-213ENST00000539332 PANK1Q8TE04 598 aa11.28□□□□□ -0.6
DDB1-213ENST00000539332 ARHGAP45Q92619 1136 aa11.28□□□□□ -0.6
DDB1-213ENST00000539332 GJD4Q96KN9 370 aaPredicted RBP11.28□□□□□ -0.6
DDB1-213ENST00000539332 MIS18AQ9NYP9 233 aa11.28□□□□□ -0.6
DDB1-213ENST00000539332 TRPC5Q9UL62 973 aaPredicted RBP11.28□□□□□ -0.6
DDB1-213ENST00000539332 TOGARAM1Q9Y4F4 1720 aa11.28□□□□□ -0.6
DDB1-213ENST00000539332 THSD7AQ9UPZ6 1657 aa11.27□□□□□ -0.6
DDB1-213ENST00000539332 KDM2BQ8NHM5 1336 aa11.27□□□□□ -0.6
DDB1-213ENST00000539332 ITGB4P16144 1822 aa11.27□□□□□ -0.61
DDB1-213ENST00000539332 DDB1Q16531 1140 aa11.27□□□□□ -0.61
DDB1-213ENST00000539332 FRAT1Q92837 279 aaPredicted RBP11.27□□□□□ -0.61
DDB1-213ENST00000539332 IPO9Q96P70 1041 aaKnown RBP11.27□□□□□ -0.61
DDB1-213ENST00000539332 TNNQ9UQP3 1299 aa11.27□□□□□ -0.61
DDB1-213ENST00000539332 DZIP1LQ8IYY4 767 aaKnown RBP11.26□□□□□ -0.61
DDB1-213ENST00000539332 SLC52A2Q9HAB3 445 aa11.26□□□□□ -0.61
DDB1-213ENST00000539332 TSPYL4Q9UJ04 414 aa11.26□□□□□ -0.61
DDB1-213ENST00000539332 RGS12O14924 1447 aa11.26□□□□□ -0.61
DDB1-213ENST00000539332 IPO8O15397 1037 aaKnown RBP11.26□□□□□ -0.61
DDB1-213ENST00000539332 MVPQ14764 893 aaKnown RBP11.26□□□□□ -0.61
DDB1-213ENST00000539332 QTRT2Q9H974 415 aaKnown RBP11.26□□□□□ -0.61
DDB1-213ENST00000539332 NOB1Q9ULX3 412 aaKnown RBP11.26□□□□□ -0.61
DDB1-213ENST00000539332 COG6Q9Y2V7 657 aa11.26□□□□□ -0.61
DDB1-213ENST00000539332 PAPPAQ13219 1627 aa11.26□□□□□ -0.61
DDB1-213ENST00000539332 UBR2Q8IWV8 1755 aa11.25□□□□□ -0.61
DDB1-213ENST00000539332 NFATC2IPQ8NCF5 419 aa11.25□□□□□ -0.61
DDB1-213ENST00000539332 ABCC4O15439 1325 aa11.25□□□□□ -0.61
DDB1-213ENST00000539332 EP400Q96L91 3159 aa11.24□□□□□ -0.61
DDB1-213ENST00000539332 C5P01031 1676 aa11.24□□□□□ -0.61
DDB1-213ENST00000539332 BTBD11A6QL63 1104 aa11.24□□□□□ -0.61
DDB1-213ENST00000539332 ERVV-2B6SEH9 535 aa11.24□□□□□ -0.61
DDB1-213ENST00000539332 KRT24Q2M2I5 525 aa11.24□□□□□ -0.61
DDB1-213ENST00000539332 CLUAP1Q96AJ1 413 aa11.24□□□□□ -0.61
DDB1-213ENST00000539332 DOT1LQ8TEK3 1739 aa11.24□□□□□ -0.61
DDB1-213ENST00000539332 LAMB4A4D0S4 1761 aa11.24□□□□□ -0.61
DDB1-213ENST00000539332 A0A0G2JS52 829 aa11.23□□□□□ -0.61
DDB1-213ENST00000539332 ONECUT3O60422 494 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms