RNA–Protein interactions for RNA: ENST00000539254.1

CELF1-219, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-219ENST00000539254 SLC39A6Q13433 755 aa12.9□□□□□ -0.34
CELF1-219ENST00000539254 GAS2L2Q8NHY3 880 aa12.9□□□□□ -0.34
CELF1-219ENST00000539254 AK7Q96M32 723 aa12.9□□□□□ -0.34
CELF1-219ENST00000539254 ITPK1Q13572 414 aa12.89□□□□□ -0.35
CELF1-219ENST00000539254 LINC00116Q8NCU8 138 aa12.89□□□□□ -0.35
CELF1-219ENST00000539254 PLEKHG2Q9H7P9 1386 aa12.89□□□□□ -0.35
CELF1-219ENST00000539254 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
CELF1-219ENST00000539254 PAPPAQ13219 1627 aa12.88□□□□□ -0.35
CELF1-219ENST00000539254 GNAT3A8MTJ3 354 aa12.88□□□□□ -0.35
CELF1-219ENST00000539254 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
CELF1-219ENST00000539254 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
CELF1-219ENST00000539254 SLC4A9Q96Q91 983 aa12.88□□□□□ -0.35
CELF1-219ENST00000539254 SLC52A2Q9HAB3 445 aa12.88□□□□□ -0.35
CELF1-219ENST00000539254 MAP3K5Q99683 1374 aa12.87□□□□□ -0.35
CELF1-219ENST00000539254 FCHSD2O94868 740 aa12.87□□□□□ -0.35
CELF1-219ENST00000539254 NEFMP07197 916 aa12.87□□□□□ -0.35
CELF1-219ENST00000539254 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
CELF1-219ENST00000539254 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
CELF1-219ENST00000539254 IL17REQ8NFR9 667 aa12.87□□□□□ -0.35
CELF1-219ENST00000539254 MTFR1LQ9H019 292 aa12.87□□□□□ -0.35
CELF1-219ENST00000539254 MYBBP1AQ9BQG0 1328 aaKnown RBP12.87□□□□□ -0.35
CELF1-219ENST00000539254 GNPATO15228 680 aa12.86□□□□□ -0.35
CELF1-219ENST00000539254 TEFQ10587 303 aa12.86□□□□□ -0.35
CELF1-219ENST00000539254 AMIGO3Q86WK7 504 aa12.86□□□□□ -0.35
CELF1-219ENST00000539254 CASZ1Q86V15 1759 aa12.86□□□□□ -0.35
CELF1-219ENST00000539254 LRP5O75197 1615 aa12.85□□□□□ -0.35
CELF1-219ENST00000539254 MCM10Q7L590 875 aa12.85□□□□□ -0.35
CELF1-219ENST00000539254 RTF1Q92541 710 aaKnown RBP12.85□□□□□ -0.35
CELF1-219ENST00000539254 SCN11AQ9UI33 1791 aa12.84□□□□□ -0.35
CELF1-219ENST00000539254 C5P01031 1676 aa12.84□□□□□ -0.35
CELF1-219ENST00000539254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.84□□□□□ -0.35
CELF1-219ENST00000539254 PTGER2P43116 358 aa12.84□□□□□ -0.35
CELF1-219ENST00000539254 CCDC146Q8IYE0 955 aa12.84□□□□□ -0.35
CELF1-219ENST00000539254 PRKRIP1Q9H875 184 aaPredicted RBP12.84□□□□□ -0.35
CELF1-219ENST00000539254 SRCAPQ6ZRS2 3230 aa12.84□□□□□ -0.35
CELF1-219ENST00000539254 TUBGCP6Q96RT7 1819 aa12.83□□□□□ -0.35
CELF1-219ENST00000539254 C4BP0C0L5 1744 aa12.83□□□□□ -0.36
CELF1-219ENST00000539254 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.36
CELF1-219ENST00000539254 TTC5Q8N0Z6 440 aa12.83□□□□□ -0.36
CELF1-219ENST00000539254 MAPK8IP3Q9UPT6 1336 aa12.83□□□□□ -0.36
CELF1-219ENST00000539254 TAF1LQ8IZX4 1826 aa12.83□□□□□ -0.36
CELF1-219ENST00000539254 KCNQ3O43525 872 aa12.82□□□□□ -0.36
CELF1-219ENST00000539254 HMGB2P26583 209 aaKnown RBP12.82□□□□□ -0.36
CELF1-219ENST00000539254 POLD1P28340 1107 aa12.82□□□□□ -0.36
CELF1-219ENST00000539254 WDR43Q15061 677 aaKnown RBP eCLIP12.82□□□□□ -0.36
CELF1-219ENST00000539254 SLC16A10Q8TF71 515 aa12.82□□□□□ -0.36
CELF1-219ENST00000539254 ARXQ96QS3 562 aa12.82□□□□□ -0.36
CELF1-219ENST00000539254 RTCBQ9Y3I0 505 aaKnown RBP12.82□□□□□ -0.36
CELF1-219ENST00000539254 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
CELF1-219ENST00000539254 BTBD11A6QL63 1104 aa12.81□□□□□ -0.36
CELF1-219ENST00000539254 CRKLP46109 303 aaKnown RBP12.81□□□□□ -0.36
CELF1-219ENST00000539254 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
CELF1-219ENST00000539254 FLAD1Q8NFF5 587 aa12.81□□□□□ -0.36
CELF1-219ENST00000539254 PLEKHF1Q96S99 279 aa12.81□□□□□ -0.36
CELF1-219ENST00000539254 THUMPD2Q9BTF0 503 aaKnown RBP12.81□□□□□ -0.36
CELF1-219ENST00000539254 FHDC1Q9C0D6 1143 aaPredicted RBP12.81□□□□□ -0.36
CELF1-219ENST00000539254 TRAPPC3LQ5T215 181 aa12.8□□□□□ -0.36
CELF1-219ENST00000539254 PNNQ9H307 717 aaKnown RBP12.8□□□□□ -0.36
CELF1-219ENST00000539254 MIS18AQ9NYP9 233 aa12.8□□□□□ -0.36
CELF1-219ENST00000539254 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
CELF1-219ENST00000539254 SSFA2P28290 1259 aa12.79□□□□□ -0.36
CELF1-219ENST00000539254 NFE2L2Q16236 605 aa12.79□□□□□ -0.36
CELF1-219ENST00000539254 ARHGEF1Q92888 912 aaKnown RBP12.79□□□□□ -0.36
CELF1-219ENST00000539254 SGIP1Q9BQI5 828 aa12.79□□□□□ -0.36
CELF1-219ENST00000539254 ADAMTS8Q9UP79 889 aa12.79□□□□□ -0.36
CELF1-219ENST00000539254 SENP3-EIF4A1A0A087X0R7 540 aa12.78□□□□□ -0.36
CELF1-219ENST00000539254 ANP32CO43423 234 aa12.78□□□□□ -0.36
CELF1-219ENST00000539254 RPS6KA4O75676 772 aa12.78□□□□□ -0.36
CELF1-219ENST00000539254 CANXP27824 592 aaKnown RBP12.78□□□□□ -0.36
CELF1-219ENST00000539254 RFC4P35249 363 aa12.78□□□□□ -0.36
CELF1-219ENST00000539254 RIPK4P57078 832 aa12.78□□□□□ -0.36
CELF1-219ENST00000539254 CCDC184Q52MB2 194 aa12.78□□□□□ -0.36
CELF1-219ENST00000539254 ZNF790Q6PG37 636 aa12.78□□□□□ -0.36
CELF1-219ENST00000539254 ZNF496Q96IT1 587 aaPredicted RBP12.78□□□□□ -0.36
CELF1-219ENST00000539254 CNTNAP4Q9C0A0 1308 aa12.78□□□□□ -0.36
CELF1-219ENST00000539254 MRC1P22897 1456 aa12.78□□□□□ -0.36
CELF1-219ENST00000539254 RC3H1Q5TC82 1133 aaKnown RBP12.77□□□□□ -0.37
CELF1-219ENST00000539254 INTS5Q6P9B9 1019 aaKnown RBP12.77□□□□□ -0.37
CELF1-219ENST00000539254 SYT17Q9BSW7 474 aa12.77□□□□□ -0.37
CELF1-219ENST00000539254 CCDC87Q9NVE4 849 aa12.77□□□□□ -0.37
CELF1-219ENST00000539254 ZNF330Q9Y3S2 320 aaPredicted RBP12.77□□□□□ -0.37
CELF1-219ENST00000539254 QSER1Q2KHR3 1735 aa12.76□□□□□ -0.37
CELF1-219ENST00000539254 PRAMEF22A3QJZ6 481 aa12.76□□□□□ -0.37
CELF1-219ENST00000539254 HTATSF1O43719 755 aaKnown RBP12.76□□□□□ -0.37
CELF1-219ENST00000539254 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
CELF1-219ENST00000539254 FMNL2Q96PY5 1086 aa12.76□□□□□ -0.37
CELF1-219ENST00000539254 SRP68Q9UHB9 627 aaKnown RBP12.76□□□□□ -0.37
CELF1-219ENST00000539254 ZBTB1Q9Y2K1 713 aa12.76□□□□□ -0.37
CELF1-219ENST00000539254 CEMIPQ8WUJ3 1361 aa12.76□□□□□ -0.37
CELF1-219ENST00000539254 KCPQ6ZWJ8 1503 aa12.76□□□□□ -0.37
CELF1-219ENST00000539254 UBR3Q6ZT12 1888 aa12.76□□□□□ -0.37
CELF1-219ENST00000539254 TMPOP42166 694 aaKnown RBP12.75□□□□□ -0.37
CELF1-219ENST00000539254 PIP4K2AP48426 406 aaPredicted RBP12.75□□□□□ -0.37
CELF1-219ENST00000539254 TAF7Q15545 349 aaPredicted RBP12.75□□□□□ -0.37
CELF1-219ENST00000539254 PELP1Q8IZL8 1130 aaKnown RBP12.75□□□□□ -0.37
CELF1-219ENST00000539254 RUNDC1Q96C34 613 aa12.75□□□□□ -0.37
CELF1-219ENST00000539254 ADAMTS7Q9UKP4 1686 aa12.75□□□□□ -0.37
CELF1-219ENST00000539254 TJP1Q07157 1748 aa12.74□□□□□ -0.37
CELF1-219ENST00000539254 HEG1Q9ULI3 1381 aa12.74□□□□□ -0.37
CELF1-219ENST00000539254 DCAF8L1A6NGE4 600 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms