RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 NECTIN2Q92692 538 aa17.44■□□□□ 0.38
LIMK1-208ENST00000538333 C19orf44Q9H6X5 657 aa17.44■□□□□ 0.38
LIMK1-208ENST00000538333 RGPD5Q99666 1765 aa17.44■□□□□ 0.38
LIMK1-208ENST00000538333 TTC22Q5TAA0 569 aa17.43■□□□□ 0.38
LIMK1-208ENST00000538333 KRT28Q7Z3Y7 464 aa17.43■□□□□ 0.38
LIMK1-208ENST00000538333 STRCP1A6NGW2 1772 aa17.43■□□□□ 0.38
LIMK1-208ENST00000538333 PXDNQ92626 1479 aa17.43■□□□□ 0.38
LIMK1-208ENST00000538333 HMMRO75330 724 aa17.43■□□□□ 0.38
LIMK1-208ENST00000538333 AKAP4Q5JQC9 854 aa17.43■□□□□ 0.38
LIMK1-208ENST00000538333 CDC45O75419 566 aa17.42■□□□□ 0.38
LIMK1-208ENST00000538333 GNAI2P04899 355 aa17.42■□□□□ 0.38
LIMK1-208ENST00000538333 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
LIMK1-208ENST00000538333 OTUD7AQ8TE49 926 aaPredicted RBP17.42■□□□□ 0.38
LIMK1-208ENST00000538333 HSPA2P54652 639 aa17.42■□□□□ 0.38
LIMK1-208ENST00000538333 HDGFL1Q5TGJ6 251 aa17.42■□□□□ 0.38
LIMK1-208ENST00000538333 HOXB7P09629 217 aa17.41■□□□□ 0.38
LIMK1-208ENST00000538333 PLEKHO1Q53GL0 409 aaPredicted RBP17.41■□□□□ 0.38
LIMK1-208ENST00000538333 ZNF530Q6P9A1 599 aaPredicted RBP17.41■□□□□ 0.38
LIMK1-208ENST00000538333 ANKRD24Q8TF21 1146 aa17.41■□□□□ 0.38
LIMK1-208ENST00000538333 KIF2CQ99661 725 aa17.41■□□□□ 0.38
LIMK1-208ENST00000538333 OVOS2A0A0G2JMS6 1433 aa17.41■□□□□ 0.38
LIMK1-208ENST00000538333 SMARCA5O60264 1052 aaPredicted RBP17.4■□□□□ 0.38
LIMK1-208ENST00000538333 GNAI3P08754 354 aa17.4■□□□□ 0.38
LIMK1-208ENST00000538333 AMOTQ4VCS5 1084 aa17.4■□□□□ 0.38
LIMK1-208ENST00000538333 AXIN2Q9Y2T1 843 aa17.4■□□□□ 0.38
LIMK1-208ENST00000538333 LMTK3Q96Q04 1460 aa17.4■□□□□ 0.38
LIMK1-208ENST00000538333 LMOD2Q6P5Q4 547 aa17.4■□□□□ 0.38
LIMK1-208ENST00000538333 SNX21Q969T3 373 aa17.4■□□□□ 0.38
LIMK1-208ENST00000538333 SIPA1L3O60292 1781 aaPredicted RBP17.39■□□□□ 0.38
LIMK1-208ENST00000538333 ADAMTS7Q9UKP4 1686 aa17.39■□□□□ 0.37
LIMK1-208ENST00000538333 PHAXQ9H814 394 aaKnown RBP17.39■□□□□ 0.37
LIMK1-208ENST00000538333 DCCP43146 1447 aa17.38■□□□□ 0.37
LIMK1-208ENST00000538333 NCOA3Q9Y6Q9 1424 aa17.38■□□□□ 0.37
LIMK1-208ENST00000538333 KCNQ3O43525 872 aa17.38■□□□□ 0.37
LIMK1-208ENST00000538333 TUBGCP6Q96RT7 1819 aa17.38■□□□□ 0.37
LIMK1-208ENST00000538333 MPRIPQ6WCQ1 1025 aa17.38■□□□□ 0.37
LIMK1-208ENST00000538333 APBB1O00213 710 aa17.37■□□□□ 0.37
LIMK1-208ENST00000538333 RNMTO43148 476 aaKnown RBP17.37■□□□□ 0.37
LIMK1-208ENST00000538333 TEFQ10587 303 aa17.37■□□□□ 0.37
LIMK1-208ENST00000538333 HSCBQ8IWL3 235 aa17.37■□□□□ 0.37
LIMK1-208ENST00000538333 USP44Q9H0E7 712 aa17.37■□□□□ 0.37
LIMK1-208ENST00000538333 TMEM94Q12767 1356 aa17.37■□□□□ 0.37
LIMK1-208ENST00000538333 CRYBG1Q9Y4K1 1723 aa17.37■□□□□ 0.37
LIMK1-208ENST00000538333 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
LIMK1-208ENST00000538333 ATP8B2P98198 1209 aa17.36■□□□□ 0.37
LIMK1-208ENST00000538333 OSBPL3Q9H4L5 887 aa17.36■□□□□ 0.37
LIMK1-208ENST00000538333 ERBB3P21860 1342 aa17.36■□□□□ 0.37
LIMK1-208ENST00000538333 PNMA6EA0A0J9YXQ4 647 aa17.36■□□□□ 0.37
LIMK1-208ENST00000538333 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
LIMK1-208ENST00000538333 COL18A1P39060 1754 aa17.35■□□□□ 0.37
LIMK1-208ENST00000538333 SDSP20132 328 aa17.35■□□□□ 0.37
LIMK1-208ENST00000538333 SALL3Q9BXA9 1300 aa17.35■□□□□ 0.37
LIMK1-208ENST00000538333 EIF5BO60841 1220 aaKnown RBP17.35■□□□□ 0.37
LIMK1-208ENST00000538333 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
LIMK1-208ENST00000538333 GSE1Q14687 1217 aa17.35■□□□□ 0.37
LIMK1-208ENST00000538333 C1orf141Q5JVX7 400 aa17.35■□□□□ 0.37
LIMK1-208ENST00000538333 CHPF2Q9P2E5 772 aa17.35■□□□□ 0.37
LIMK1-208ENST00000538333 LRRFIP2Q9Y608 721 aaKnown RBP17.35■□□□□ 0.37
LIMK1-208ENST00000538333 HEG1Q9ULI3 1381 aa17.35■□□□□ 0.37
LIMK1-208ENST00000538333 SPRYD3Q8NCJ5 442 aa17.34■□□□□ 0.37
LIMK1-208ENST00000538333 CHMP4AQ9BY43 222 aa17.34■□□□□ 0.37
LIMK1-208ENST00000538333 BCL11AQ9H165 835 aa17.34■□□□□ 0.37
LIMK1-208ENST00000538333 EXOC6BQ9Y2D4 811 aa17.34■□□□□ 0.37
LIMK1-208ENST00000538333 IBTKQ9P2D0 1353 aaPredicted RBP17.33■□□□□ 0.37
LIMK1-208ENST00000538333 ATF3P18847 181 aa17.33■□□□□ 0.37
LIMK1-208ENST00000538333 DDIT3P35638 169 aa17.33■□□□□ 0.36
LIMK1-208ENST00000538333 PDE1AP54750 535 aa17.33■□□□□ 0.36
LIMK1-208ENST00000538333 UBTFL1P0CB47 393 aaPredicted RBP17.32■□□□□ 0.36
LIMK1-208ENST00000538333 ZC3H6P61129 1189 aaKnown RBP17.32■□□□□ 0.36
LIMK1-208ENST00000538333 LRRCC1Q9C099 1032 aa17.32■□□□□ 0.36
LIMK1-208ENST00000538333 SRCIN1Q9C0H9 1055 aa17.32■□□□□ 0.36
LIMK1-208ENST00000538333 CHMP5Q9NZZ3 219 aa17.32■□□□□ 0.36
LIMK1-208ENST00000538333 SCN11AQ9UI33 1791 aa17.31■□□□□ 0.36
LIMK1-208ENST00000538333 ABCC6O95255 1503 aa17.31■□□□□ 0.36
LIMK1-208ENST00000538333 CD2BP2O95400 341 aaKnown RBP17.3■□□□□ 0.36
LIMK1-208ENST00000538333 BEND3Q5T5X7 828 aa17.3■□□□□ 0.36
LIMK1-208ENST00000538333 SSH3Q8TE77 659 aa17.3■□□□□ 0.36
LIMK1-208ENST00000538333 DDX17Q92841 729 aaKnown RBP17.3■□□□□ 0.36
LIMK1-208ENST00000538333 USP26Q9BXU7 913 aa17.3■□□□□ 0.36
LIMK1-208ENST00000538333 ADCY9O60503 1353 aa17.3■□□□□ 0.36
LIMK1-208ENST00000538333 GIGYF1O75420 1035 aaPredicted RBP17.3■□□□□ 0.36
LIMK1-208ENST00000538333 DNAAF4Q8WXU2 420 aa17.3■□□□□ 0.36
LIMK1-208ENST00000538333 PI4KAP2A4QPH2 592 aa17.29■□□□□ 0.36
LIMK1-208ENST00000538333 PI4KAP1Q8N8J0 262 aa17.29■□□□□ 0.36
LIMK1-208ENST00000538333 ANXA1P04083 346 aa17.29■□□□□ 0.36
LIMK1-208ENST00000538333 RBM42Q9BTD8 480 aaKnown RBP17.29■□□□□ 0.36
LIMK1-208ENST00000538333 DBF4Q9UBU7 674 aaPredicted RBP17.29■□□□□ 0.36
LIMK1-208ENST00000538333 XIRP1Q702N8 1843 aaKnown RBP17.29■□□□□ 0.36
LIMK1-208ENST00000538333 TNS3Q68CZ2 1445 aa17.28■□□□□ 0.36
LIMK1-208ENST00000538333 POLA2Q14181 598 aa17.28■□□□□ 0.36
LIMK1-208ENST00000538333 NPHP3Q7Z494 1330 aa17.28■□□□□ 0.36
LIMK1-208ENST00000538333 CASC1Q6TDU7 716 aa17.28■□□□□ 0.36
LIMK1-208ENST00000538333 AEBP2Q6ZN18 517 aaPredicted RBP17.28■□□□□ 0.36
LIMK1-208ENST00000538333 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
LIMK1-208ENST00000538333 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.36
LIMK1-208ENST00000538333 KDM6AO15550 1401 aaPredicted RBP17.27■□□□□ 0.35
LIMK1-208ENST00000538333 MEGF6O75095 1541 aa17.27■□□□□ 0.35
LIMK1-208ENST00000538333 MX1P20591 662 aa17.26■□□□□ 0.35
LIMK1-208ENST00000538333 STAP2Q9UGK3 403 aa17.26■□□□□ 0.35
LIMK1-208ENST00000538333 K7ELQ4 463 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms