RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 WDR78Q5VTH9 848 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 NBPF6Q5VWK0 638 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 NBPF5PQ86XG9 351 aaPredicted RBP6.37□□□□□ -1.39
LRP6-203ENST00000538239 LRRC59Q96AG4 307 aaKnown RBP6.37□□□□□ -1.39
LRP6-203ENST00000538239 NBPF4Q96M43 638 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 GRM1Q13255 1194 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 BOLA2Q9H3K6 86 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 UHRF1BP1Q6BDS2 1440 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 MAP3K1Q13233 1512 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 DNAAF4Q8WXU2 420 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 MKNK2Q9HBH9 465 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.37□□□□□ -1.392e-7■■■■■ 120.7
LRP6-203ENST00000538239 UGGT2Q9NYU1 1516 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 PPP1R42Q7Z4L9 355 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 SDF4Q9BRK5 362 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 TEX13AQ9BXU3 409 aaPredicted RBP6.37□□□□□ -1.39
LRP6-203ENST00000538239 CCDC8Q9H0W5 538 aaPredicted RBP6.37□□□□□ -1.39
LRP6-203ENST00000538239 ZRANB1Q9UGI0 708 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 C11orf95C9JLR9 678 aaPredicted RBP6.37□□□□□ -1.39
LRP6-203ENST00000538239 PIP4K2AP48426 406 aaPredicted RBP6.37□□□□□ -1.39
LRP6-203ENST00000538239 SLFN5Q08AF3 891 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 SLC39A6Q13433 755 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 PDILTQ8N807 584 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 DBF4Q9UBU7 674 aaPredicted RBP6.37□□□□□ -1.39
LRP6-203ENST00000538239 WDR62O43379 1518 aa6.37□□□□□ -1.39
LRP6-203ENST00000538239 MATR3P43243 847 aaKnown RBP eCLIP6.36□□□□□ -1.392e-11■■□□□ 12.7
LRP6-203ENST00000538239 ABCC10Q5T3U5 1492 aa6.36□□□□□ -1.39
LRP6-203ENST00000538239 ANXA1P04083 346 aa6.36□□□□□ -1.39
LRP6-203ENST00000538239 HSP90AB2PQ58FF8 381 aa6.36□□□□□ -1.39
LRP6-203ENST00000538239 CWC25Q9NXE8 425 aaPredicted RBP6.36□□□□□ -1.39
LRP6-203ENST00000538239 LRRFIP2Q9Y608 721 aaKnown RBP6.36□□□□□ -1.39
LRP6-203ENST00000538239 STK38Q15208 465 aa6.36□□□□□ -1.39
LRP6-203ENST00000538239 IMMTQ16891 758 aaKnown RBP6.36□□□□□ -1.39
LRP6-203ENST00000538239 JAKMIP1Q96N16 626 aaKnown RBP6.36□□□□□ -1.39
LRP6-203ENST00000538239 C19orf44Q9H6X5 657 aa6.36□□□□□ -1.39
LRP6-203ENST00000538239 ABCC2Q92887 1545 aa6.36□□□□□ -1.39
LRP6-203ENST00000538239 TFCP2L1Q9NZI6 479 aa6.36□□□□□ -1.39
LRP6-203ENST00000538239 CTNNA3Q9UI47 895 aa6.36□□□□□ -1.39
LRP6-203ENST00000538239 ZNF396Q96N95 335 aaPredicted RBP6.36□□□□□ -1.39
LRP6-203ENST00000538239 FANCIQ9NVI1 1328 aa6.36□□□□□ -1.39
LRP6-203ENST00000538239 TTC21AQ8NDW8 1320 aa6.36□□□□□ -1.39
LRP6-203ENST00000538239 WDHD1O75717 1129 aaPredicted RBP6.36□□□□□ -1.39
LRP6-203ENST00000538239 SETDB2Q96T68 719 aa6.36□□□□□ -1.39
LRP6-203ENST00000538239 OFD1O75665 1012 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 SNRPA1P09661 255 aaKnown RBP6.35□□□□□ -1.39
LRP6-203ENST00000538239 KIF1BPQ96EK5 621 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 BTG4Q9NY30 223 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 CCDC96Q2M329 555 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 CDC5LQ99459 802 aaKnown RBP6.35□□□□□ -1.39
LRP6-203ENST00000538239 PDRG1Q9NUG6 133 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 KCNA6P17658 529 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 CCDC70Q6NSX1 233 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 CLEC11AQ9Y240 323 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 TSPOAP1O95153 1857 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 SSBP05455 408 aaKnown RBP eCLIP6.35□□□□□ -1.39
LRP6-203ENST00000538239 IL2RBP14784 551 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 BRPF1P55201 1214 aaPredicted RBP6.35□□□□□ -1.39
LRP6-203ENST00000538239 ANKRD1Q15327 319 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 HOMER1Q86YM7 354 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 MAP3K12Q12852 859 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 BLOC1S2Q6QNY1 142 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 SSH1Q8WYL5 1049 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 MAGEC2Q9UBF1 373 aaPredicted RBP6.35□□□□□ -1.39
LRP6-203ENST00000538239 RPAP2Q8IXW5 612 aaPredicted RBP6.35□□□□□ -1.39
LRP6-203ENST00000538239 ABCC1P33527 1531 aa6.35□□□□□ -1.39
LRP6-203ENST00000538239 ZNF287Q9HBT7 754 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 FIBPO43427 364 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 RANBP6O60518 1105 aaKnown RBP6.34□□□□□ -1.39
LRP6-203ENST00000538239 RAB11FIP3O75154 756 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 POLD1P28340 1107 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 NBPF14Q5TI25 921 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 ZNF444Q8N0Y2 327 aaPredicted RBP6.34□□□□□ -1.39
LRP6-203ENST00000538239 DDX17Q92841 729 aaKnown RBP6.34□□□□□ -1.39
LRP6-203ENST00000538239 NAPBQ9H115 298 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 SEC63Q9UGP8 760 aaKnown RBP6.34□□□□□ -1.39
LRP6-203ENST00000538239 F8W031 263 aaPredicted RBP6.34□□□□□ -1.39
LRP6-203ENST00000538239 FLIIQ13045 1269 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 RABEP1Q15276 862 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 TTLL5Q6EMB2 1281 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 LDHAL6AQ6ZMR3 332 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 NSD2O96028 1365 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 ANKRD36BQ8N2N9 1353 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 SLF2Q8IX21 1173 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 PAF1Q8N7H5 531 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 NAT10Q9H0A0 1025 aaKnown RBP6.34□□□□□ -1.39
LRP6-203ENST00000538239 NOL7Q9UMY1 257 aaKnown RBP6.34□□□□□ -1.39
LRP6-203ENST00000538239 UBE3BQ7Z3V4 1068 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 MBIPQ9NS73 344 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 PARP3Q9Y6F1 533 aa6.34□□□□□ -1.39
LRP6-203ENST00000538239 KINO60870 393 aaKnown RBP6.34□□□□□ -1.4
LRP6-203ENST00000538239 SIRT1Q96EB6 747 aa6.34□□□□□ -1.4
LRP6-203ENST00000538239 RPRD2Q5VT52 1461 aaKnown RBP6.34□□□□□ -1.4
LRP6-203ENST00000538239 MX1P20591 662 aa6.34□□□□□ -1.4
LRP6-203ENST00000538239 CHPF2Q9P2E5 772 aa6.34□□□□□ -1.4
LRP6-203ENST00000538239 NPATQ14207 1427 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 ABCC11Q96J66 1382 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 CASTP20810 708 aaKnown RBP6.33□□□□□ -1.4
LRP6-203ENST00000538239 CCDC152Q4G0S7 254 aa6.33□□□□□ -1.4
LRP6-203ENST00000538239 C16orf71Q8IYS4 520 aaPredicted RBP6.33□□□□□ -1.4
LRP6-203ENST00000538239 NIP7Q9Y221 180 aaKnown RBP eCLIP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms