RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 GAS2L2Q8NHY3 880 aa17.43■□□□□ 0.38
CHFR-216ENST00000538235 LRRC4BQ9NT99 713 aa17.43■□□□□ 0.38
CHFR-216ENST00000538235 RRP7AQ9Y3A4 280 aaKnown RBP17.43■□□□□ 0.38
CHFR-216ENST00000538235 UBR3Q6ZT12 1888 aa17.43■□□□□ 0.38
CHFR-216ENST00000538235 C4BP0C0L5 1744 aa17.42■□□□□ 0.38
CHFR-216ENST00000538235 BAG6P46379 1132 aa17.42■□□□□ 0.38
CHFR-216ENST00000538235 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
CHFR-216ENST00000538235 ANO8Q9HCE9 1232 aaPredicted RBP17.42■□□□□ 0.38
CHFR-216ENST00000538235 ASAP1Q9ULH1 1129 aa17.42■□□□□ 0.38
CHFR-216ENST00000538235 PALLDQ8WX93 1383 aa17.41■□□□□ 0.38
CHFR-216ENST00000538235 WDR43Q15061 677 aaKnown RBP eCLIP17.41■□□□□ 0.38
CHFR-216ENST00000538235 NFE2L2Q16236 605 aa17.41■□□□□ 0.38
CHFR-216ENST00000538235 MCM10Q7L590 875 aa17.41■□□□□ 0.38
CHFR-216ENST00000538235 SLC4A9Q96Q91 983 aa17.41■□□□□ 0.38
CHFR-216ENST00000538235 GNAT3A8MTJ3 354 aa17.4■□□□□ 0.38
CHFR-216ENST00000538235 PLSCR1O15162 318 aa17.4■□□□□ 0.38
CHFR-216ENST00000538235 ATG3Q9NT62 314 aa17.4■□□□□ 0.38
CHFR-216ENST00000538235 LAMB4A4D0S4 1761 aa17.39■□□□□ 0.37
CHFR-216ENST00000538235 ERVV-2B6SEH9 535 aa17.39■□□□□ 0.37
CHFR-216ENST00000538235 TMPOP42166 694 aaKnown RBP17.39■□□□□ 0.37
CHFR-216ENST00000538235 TXNRD1Q16881 649 aa17.39■□□□□ 0.37
CHFR-216ENST00000538235 NFATC2IPQ8NCF5 419 aa17.39■□□□□ 0.37
CHFR-216ENST00000538235 SLC52A2Q9HAB3 445 aa17.39■□□□□ 0.37
CHFR-216ENST00000538235 TMOD3Q9NYL9 352 aa17.39■□□□□ 0.37
CHFR-216ENST00000538235 HSP90AB1P08238 724 aaKnown RBP17.38■□□□□ 0.37
CHFR-216ENST00000538235 SF3B2Q13435 895 aaKnown RBP17.38■□□□□ 0.37
CHFR-216ENST00000538235 RUNDC1Q96C34 613 aa17.38■□□□□ 0.37
CHFR-216ENST00000538235 TRIM35Q9UPQ4 493 aa17.38■□□□□ 0.37
CHFR-216ENST00000538235 C4AP0C0L4 1744 aa17.38■□□□□ 0.37
CHFR-216ENST00000538235 KCNQ3O43525 872 aa17.37■□□□□ 0.37
CHFR-216ENST00000538235 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
CHFR-216ENST00000538235 ZNF827Q17R98 1081 aa17.36■□□□□ 0.37
CHFR-216ENST00000538235 MAPK8IP3Q9UPT6 1336 aa17.36■□□□□ 0.37
CHFR-216ENST00000538235 APAF1O14727 1248 aa17.35■□□□□ 0.37
CHFR-216ENST00000538235 CABP4P57796 275 aa17.35■□□□□ 0.37
CHFR-216ENST00000538235 ITPK1Q13572 414 aa17.35■□□□□ 0.37
CHFR-216ENST00000538235 AMIGO3Q86WK7 504 aa17.35■□□□□ 0.37
CHFR-216ENST00000538235 RIPK4P57078 832 aa17.33■□□□□ 0.36
CHFR-216ENST00000538235 NEUROD2Q15784 382 aa17.33■□□□□ 0.36
CHFR-216ENST00000538235 FAM9BQ8IZU0 186 aa17.33■□□□□ 0.36
CHFR-216ENST00000538235 COL24A1Q17RW2 1714 aa17.33■□□□□ 0.36
CHFR-216ENST00000538235 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
CHFR-216ENST00000538235 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
CHFR-216ENST00000538235 LINC00116Q8NCU8 138 aa17.31■□□□□ 0.36
CHFR-216ENST00000538235 PDGFDQ9GZP0 370 aaPredicted RBP17.31■□□□□ 0.36
CHFR-216ENST00000538235 MIS18AQ9NYP9 233 aa17.31■□□□□ 0.36
CHFR-216ENST00000538235 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
CHFR-216ENST00000538235 LOC102724428A0A0B4J2F2 783 aa17.3■□□□□ 0.36
CHFR-216ENST00000538235 PSDA5PKW4 1024 aaPredicted RBP17.3■□□□□ 0.36
CHFR-216ENST00000538235 HTATSF1O43719 755 aaKnown RBP17.3■□□□□ 0.36
CHFR-216ENST00000538235 SIK1P57059 783 aa17.3■□□□□ 0.36
CHFR-216ENST00000538235 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
CHFR-216ENST00000538235 PRAMEF22A3QJZ6 481 aa17.28■□□□□ 0.36
CHFR-216ENST00000538235 PTCD1O75127 700 aaKnown RBP17.28■□□□□ 0.36
CHFR-216ENST00000538235 TEFQ10587 303 aa17.28■□□□□ 0.36
CHFR-216ENST00000538235 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
CHFR-216ENST00000538235 SMARCC1Q92922 1105 aaPredicted RBP17.27■□□□□ 0.36
CHFR-216ENST00000538235 PNNQ9H307 717 aaKnown RBP17.27■□□□□ 0.36
CHFR-216ENST00000538235 R3HDM1Q15032 1099 aaKnown RBP17.26■□□□□ 0.35
CHFR-216ENST00000538235 SLC27A3Q5K4L6 730 aa17.26■□□□□ 0.35
CHFR-216ENST00000538235 ZNF790Q6PG37 636 aa17.26■□□□□ 0.35
CHFR-216ENST00000538235 DNAJC10Q8IXB1 793 aa17.26■□□□□ 0.35
CHFR-216ENST00000538235 RTF1Q92541 710 aaKnown RBP17.26■□□□□ 0.35
CHFR-216ENST00000538235 RBM42Q9BTD8 480 aaKnown RBP17.26■□□□□ 0.35
CHFR-216ENST00000538235 HEG1Q9ULI3 1381 aa17.26■□□□□ 0.35
CHFR-216ENST00000538235 BCORQ6W2J9 1755 aa17.25■□□□□ 0.35
CHFR-216ENST00000538235 NEFMP07197 916 aa17.25■□□□□ 0.35
CHFR-216ENST00000538235 PNPLA7Q6ZV29 1317 aa17.24■□□□□ 0.35
CHFR-216ENST00000538235 SCN7AQ01118 1682 aa17.24■□□□□ 0.35
CHFR-216ENST00000538235 BTBD11A6QL63 1104 aa17.24■□□□□ 0.35
CHFR-216ENST00000538235 ATP6V1AP38606 617 aa17.24■□□□□ 0.35
CHFR-216ENST00000538235 KRT24Q2M2I5 525 aa17.24■□□□□ 0.35
CHFR-216ENST00000538235 LRP5O75197 1615 aa17.23■□□□□ 0.35
CHFR-216ENST00000538235 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
CHFR-216ENST00000538235 SLC15A2Q16348 729 aa17.23■□□□□ 0.35
CHFR-216ENST00000538235 ZNF521Q96K83 1311 aa17.22■□□□□ 0.35
CHFR-216ENST00000538235 ZNF853P0CG23 659 aa17.22■□□□□ 0.35
CHFR-216ENST00000538235 SPINK5Q9NQ38 1064 aaPredicted RBP17.22■□□□□ 0.35
CHFR-216ENST00000538235 SALL2Q9Y467 1007 aaPredicted RBP17.22■□□□□ 0.35
CHFR-216ENST00000538235 WWC1Q8IX03 1113 aa17.21■□□□□ 0.35
CHFR-216ENST00000538235 EIF4A1P60842 406 aaKnown RBP17.2■□□□□ 0.34
CHFR-216ENST00000538235 INTS5Q6P9B9 1019 aaKnown RBP17.2■□□□□ 0.34
CHFR-216ENST00000538235 CNTNAP4Q9C0A0 1308 aa17.2■□□□□ 0.34
CHFR-216ENST00000538235 CHL1O00533 1208 aa17.19■□□□□ 0.34
CHFR-216ENST00000538235 CYP19A1P11511 503 aaPredicted RBP17.19■□□□□ 0.34
CHFR-216ENST00000538235 LMOD3Q0VAK6 560 aa17.19■□□□□ 0.34
CHFR-216ENST00000538235 CCDC27Q2M243 656 aa17.19■□□□□ 0.34
CHFR-216ENST00000538235 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
CHFR-216ENST00000538235 PIP4K2AP48426 406 aaPredicted RBP17.18■□□□□ 0.34
CHFR-216ENST00000538235 MBIPQ9NS73 344 aa17.18■□□□□ 0.34
CHFR-216ENST00000538235 STK32BQ9NY57 414 aa17.18■□□□□ 0.34
CHFR-216ENST00000538235 ZBTB1Q9Y2K1 713 aa17.18■□□□□ 0.34
CHFR-216ENST00000538235 USP16Q9Y5T5 823 aa17.18■□□□□ 0.34
CHFR-216ENST00000538235 COL23A1Q86Y22 540 aaPredicted RBP17.17■□□□□ 0.34
CHFR-216ENST00000538235 TTC5Q8N0Z6 440 aa17.17■□□□□ 0.34
CHFR-216ENST00000538235 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
CHFR-216ENST00000538235 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
CHFR-216ENST00000538235 TSR2Q969E8 191 aaKnown RBP17.16■□□□□ 0.34
CHFR-216ENST00000538235 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
CHFR-216ENST00000538235 GNPATO15228 680 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms