RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 LARP6Q9BRS8 491 aaKnown RBP10.71□□□□□ -0.69
UBE3B-208ENST00000538070 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.71□□□□□ -0.69
UBE3B-208ENST00000538070 MYL6BP14649 208 aa10.71□□□□□ -0.69
UBE3B-208ENST00000538070 TNPO1Q92973 898 aaKnown RBP10.71□□□□□ -0.69
UBE3B-208ENST00000538070 IGSF1Q8N6C5 1336 aa10.71□□□□□ -0.69
UBE3B-208ENST00000538070 SRGAP3O43295 1099 aa10.71□□□□□ -0.7
UBE3B-208ENST00000538070 ILDR1Q86SU0 546 aaPredicted RBP10.71□□□□□ -0.7
UBE3B-208ENST00000538070 LRRCC1Q9C099 1032 aa10.71□□□□□ -0.7
UBE3B-208ENST00000538070 TECPR2O15040 1411 aa10.7□□□□□ -0.7
UBE3B-208ENST00000538070 K7ELQ4 463 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-208ENST00000538070 CHAMP1Q96JM3 812 aa10.7□□□□□ -0.7
UBE3B-208ENST00000538070 C9orf78Q9NZ63 289 aaPredicted RBP10.7□□□□□ -0.7
UBE3B-208ENST00000538070 GCP02774 474 aa10.7□□□□□ -0.7
UBE3B-208ENST00000538070 GNAI3P08754 354 aa10.7□□□□□ -0.7
UBE3B-208ENST00000538070 PDE1AP54750 535 aa10.7□□□□□ -0.7
UBE3B-208ENST00000538070 SRCIN1Q9C0H9 1055 aa10.7□□□□□ -0.7
UBE3B-208ENST00000538070 NEK4P51957 841 aa10.69□□□□□ -0.7
UBE3B-208ENST00000538070 PPP1R42Q7Z4L9 355 aa10.69□□□□□ -0.7
UBE3B-208ENST00000538070 DDX54Q8TDD1 881 aaKnown RBP10.69□□□□□ -0.7
UBE3B-208ENST00000538070 ANKRD24Q8TF21 1146 aa10.69□□□□□ -0.7
UBE3B-208ENST00000538070 UPF3BQ9BZI7 483 aaKnown RBP10.69□□□□□ -0.7
UBE3B-208ENST00000538070 ZNF330Q9Y3S2 320 aaPredicted RBP10.69□□□□□ -0.7
UBE3B-208ENST00000538070 CEP170BQ9Y4F5 1589 aaPredicted RBP10.69□□□□□ -0.7
UBE3B-208ENST00000538070 A0A0G2JS52 829 aa10.69□□□□□ -0.7
UBE3B-208ENST00000538070 GOLGA6L3A6NEY3 463 aa10.69□□□□□ -0.7
UBE3B-208ENST00000538070 NBPF7P0C2Y1 421 aaPredicted RBP10.69□□□□□ -0.7
UBE3B-208ENST00000538070 RBM25P49756 843 aaKnown RBP10.69□□□□□ -0.7
UBE3B-208ENST00000538070 ANKRD26Q9UPS8 1709 aa10.69□□□□□ -0.7
UBE3B-208ENST00000538070 CRB1P82279 1406 aa10.69□□□□□ -0.7
UBE3B-208ENST00000538070 ARHGEF10O15013 1369 aa10.69□□□□□ -0.7
UBE3B-208ENST00000538070 MAP3K5Q99683 1374 aa10.69□□□□□ -0.7
UBE3B-208ENST00000538070 KRT28Q7Z3Y7 464 aa10.69□□□□□ -0.7
UBE3B-208ENST00000538070 SIL1Q9H173 461 aa10.69□□□□□ -0.7
UBE3B-208ENST00000538070 RIMS1Q86UR5 1692 aaKnown RBP10.68□□□□□ -0.7
UBE3B-208ENST00000538070 PLEKHO1Q53GL0 409 aaPredicted RBP10.68□□□□□ -0.7
UBE3B-208ENST00000538070 IP6K1Q92551 441 aa10.68□□□□□ -0.7
UBE3B-208ENST00000538070 KIF2CQ99661 725 aa10.68□□□□□ -0.7
UBE3B-208ENST00000538070 PANK2Q9BZ23 570 aa10.68□□□□□ -0.7
UBE3B-208ENST00000538070 MX1P20591 662 aa10.68□□□□□ -0.7
UBE3B-208ENST00000538070 KIF13AQ9H1H9 1805 aa10.68□□□□□ -0.7
UBE3B-208ENST00000538070 EIF5BO60841 1220 aaKnown RBP10.68□□□□□ -0.7
UBE3B-208ENST00000538070 CWF19L2Q2TBE0 894 aaKnown RBP10.68□□□□□ -0.7
UBE3B-208ENST00000538070 MCTP1Q6DN14 999 aa10.68□□□□□ -0.7
UBE3B-208ENST00000538070 ZGPATQ8N5A5 531 aaKnown RBP10.67□□□□□ -0.7
UBE3B-208ENST00000538070 GBP4Q96PP9 640 aa10.67□□□□□ -0.7
UBE3B-208ENST00000538070 USP44Q9H0E7 712 aa10.67□□□□□ -0.7
UBE3B-208ENST00000538070 PA2G4Q9UQ80 394 aaKnown RBP10.67□□□□□ -0.7
UBE3B-208ENST00000538070 AXIN2Q9Y2T1 843 aa10.67□□□□□ -0.7
UBE3B-208ENST00000538070 USP31Q70CQ4 1352 aa10.67□□□□□ -0.7
UBE3B-208ENST00000538070 HSPA2P54652 639 aa10.67□□□□□ -0.7
UBE3B-208ENST00000538070 PROSER3Q2NL68 480 aa10.67□□□□□ -0.7
UBE3B-208ENST00000538070 UNC5CLQ8IV45 518 aa10.67□□□□□ -0.7
UBE3B-208ENST00000538070 USP26Q9BXU7 913 aa10.67□□□□□ -0.7
UBE3B-208ENST00000538070 KIAA0232Q92628 1395 aa10.67□□□□□ -0.7
UBE3B-208ENST00000538070 ERC2O15083 957 aa10.66□□□□□ -0.7
UBE3B-208ENST00000538070 REC8O95072 547 aa10.66□□□□□ -0.7
UBE3B-208ENST00000538070 PKP1Q13835 747 aa10.66□□□□□ -0.7
UBE3B-208ENST00000538070 ITSN1Q15811 1721 aa10.66□□□□□ -0.7
UBE3B-208ENST00000538070 UBR1Q8IWV7 1749 aa10.66□□□□□ -0.7
UBE3B-208ENST00000538070 DLG5Q8TDM6 1919 aa10.66□□□□□ -0.7
UBE3B-208ENST00000538070 ST18O60284 1047 aa10.66□□□□□ -0.7
UBE3B-208ENST00000538070 RAPGEF4Q8WZA2 1011 aa10.66□□□□□ -0.7
UBE3B-208ENST00000538070 DDX49Q9Y6V7 483 aaKnown RBP10.66□□□□□ -0.7
UBE3B-208ENST00000538070 REREQ9P2R6 1566 aa10.66□□□□□ -0.7
UBE3B-208ENST00000538070 ATF3P18847 181 aa10.65□□□□□ -0.7
UBE3B-208ENST00000538070 DNAAF4Q8WXU2 420 aa10.65□□□□□ -0.7
UBE3B-208ENST00000538070 MAP3K2Q9Y2U5 619 aa10.65□□□□□ -0.7
UBE3B-208ENST00000538070 SETD1AO15047 1707 aaKnown RBP10.65□□□□□ -0.7
UBE3B-208ENST00000538070 GOLGA6L22H0YM25 854 aa10.65□□□□□ -0.7
UBE3B-208ENST00000538070 ATP8B2P98198 1209 aa10.65□□□□□ -0.7
UBE3B-208ENST00000538070 KCNH5Q8NCM2 988 aa10.65□□□□□ -0.7
UBE3B-208ENST00000538070 CHMP3Q9Y3E7 222 aa10.65□□□□□ -0.7
UBE3B-208ENST00000538070 EIF4A1P60842 406 aaKnown RBP10.64□□□□□ -0.71
UBE3B-208ENST00000538070 RABEP1Q15276 862 aa10.64□□□□□ -0.71
UBE3B-208ENST00000538070 CWC27Q6UX04 472 aaKnown RBP10.64□□□□□ -0.71
UBE3B-208ENST00000538070 DIP2AQ14689 1571 aa10.64□□□□□ -0.71
UBE3B-208ENST00000538070 RGPD8O14715 1765 aaPredicted RBP10.64□□□□□ -0.71
UBE3B-208ENST00000538070 RIC3Q7Z5B4 369 aa10.64□□□□□ -0.71
UBE3B-208ENST00000538070 RGS12O14924 1447 aa10.64□□□□□ -0.71
UBE3B-208ENST00000538070 ATP10DQ9P241 1426 aa10.64□□□□□ -0.71
UBE3B-208ENST00000538070 DDX11L8A8MPP1 907 aa10.64□□□□□ -0.71
UBE3B-208ENST00000538070 KCNJ4P48050 445 aa10.64□□□□□ -0.71
UBE3B-208ENST00000538070 KLHDC4Q8TBB5 520 aa10.64□□□□□ -0.71
UBE3B-208ENST00000538070 SPG7Q9UQ90 795 aa10.64□□□□□ -0.71
UBE3B-208ENST00000538070 PALD1Q9ULE6 856 aa10.63□□□□□ -0.71
UBE3B-208ENST00000538070 PEAK1Q9H792 1746 aa10.63□□□□□ -0.71
UBE3B-208ENST00000538070 NFATC2IPQ8NCF5 419 aa10.63□□□□□ -0.71
UBE3B-208ENST00000538070 SNX21Q969T3 373 aa10.63□□□□□ -0.71
UBE3B-208ENST00000538070 MCCP23508 829 aa10.63□□□□□ -0.71
UBE3B-208ENST00000538070 RNMTO43148 476 aaKnown RBP10.62□□□□□ -0.71
UBE3B-208ENST00000538070 L1TD1Q5T7N2 865 aaKnown RBP10.62□□□□□ -0.71
UBE3B-208ENST00000538070 CCDC8Q9H0W5 538 aaPredicted RBP10.62□□□□□ -0.71
UBE3B-208ENST00000538070 SOS1Q07889 1333 aaPredicted RBP10.62□□□□□ -0.71
UBE3B-208ENST00000538070 C3P01024 1663 aa10.62□□□□□ -0.71
UBE3B-208ENST00000538070 PRPF40AO75400 957 aaKnown RBP10.62□□□□□ -0.71
UBE3B-208ENST00000538070 RHPN1Q8TCX5 695 aa10.62□□□□□ -0.71
UBE3B-208ENST00000538070 HTATSF1O43719 755 aaKnown RBP10.62□□□□□ -0.71
UBE3B-208ENST00000538070 XRCC6P12956 609 aaKnown RBP eCLIP10.62□□□□□ -0.71
UBE3B-208ENST00000538070 CPA1P15085 419 aa10.62□□□□□ -0.71
UBE3B-208ENST00000538070 AKAP4Q5JQC9 854 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms