RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 TSPYL4Q9UJ04 414 aa17.25■□□□□ 0.35
CLPB-209ENST00000538039 GADD45BO75293 160 aaPredicted RBP17.24■□□□□ 0.35
CLPB-209ENST00000538039 LARP6Q9BRS8 491 aaKnown RBP17.24■□□□□ 0.35
CLPB-209ENST00000538039 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
CLPB-209ENST00000538039 MAP4K4O95819 1239 aaPredicted RBP17.24■□□□□ 0.35
CLPB-209ENST00000538039 REC8O95072 547 aa17.24■□□□□ 0.35
CLPB-209ENST00000538039 CEP170BQ9Y4F5 1589 aaPredicted RBP17.24■□□□□ 0.35
CLPB-209ENST00000538039 PLEKHG5O94827 1062 aa17.23■□□□□ 0.35
CLPB-209ENST00000538039 MPNDQ8N594 471 aa17.23■□□□□ 0.35
CLPB-209ENST00000538039 RILPL2Q969X0 211 aa17.23■□□□□ 0.35
CLPB-209ENST00000538039 TCHHQ07283 1943 aa17.23■□□□□ 0.35
CLPB-209ENST00000538039 CHMLP26374 656 aa17.23■□□□□ 0.35
CLPB-209ENST00000538039 OFD1O75665 1012 aa17.22■□□□□ 0.35
CLPB-209ENST00000538039 EYA1Q99502 592 aa17.22■□□□□ 0.35
CLPB-209ENST00000538039 IL1RAPL2Q9NP60 686 aa17.22■□□□□ 0.35
CLPB-209ENST00000538039 BRD1O95696 1058 aa17.22■□□□□ 0.35
CLPB-209ENST00000538039 RBM10P98175 930 aaKnown RBP17.22■□□□□ 0.35
CLPB-209ENST00000538039 TPRNQ4KMQ1 711 aa17.21■□□□□ 0.35
CLPB-209ENST00000538039 CASC1Q6TDU7 716 aa17.21■□□□□ 0.35
CLPB-209ENST00000538039 MX1P20591 662 aa17.21■□□□□ 0.35
CLPB-209ENST00000538039 LRSAM1Q6UWE0 723 aa17.21■□□□□ 0.35
CLPB-209ENST00000538039 ANO2Q9NQ90 1003 aa17.21■□□□□ 0.35
CLPB-209ENST00000538039 LRRFIP2Q9Y608 721 aaKnown RBP17.21■□□□□ 0.35
CLPB-209ENST00000538039 RRP9O43818 475 aaKnown RBP17.2■□□□□ 0.34
CLPB-209ENST00000538039 GNAI2P04899 355 aa17.2■□□□□ 0.34
CLPB-209ENST00000538039 LTKP29376 864 aa17.2■□□□□ 0.34
CLPB-209ENST00000538039 FLIIQ13045 1269 aa17.2■□□□□ 0.34
CLPB-209ENST00000538039 TECPR2O15040 1411 aa17.2■□□□□ 0.34
CLPB-209ENST00000538039 TRIM6-TRIM34B2RNG4 842 aa17.2■□□□□ 0.34
CLPB-209ENST00000538039 USP6P35125 1406 aa17.2■□□□□ 0.34
CLPB-209ENST00000538039 CUL4AQ13619 759 aa17.2■□□□□ 0.34
CLPB-209ENST00000538039 NUTM1Q86Y26 1132 aa17.2■□□□□ 0.34
CLPB-209ENST00000538039 NOL7Q9UMY1 257 aaKnown RBP17.2■□□□□ 0.34
CLPB-209ENST00000538039 ZBTB7CA1YPR0 619 aa17.19■□□□□ 0.34
CLPB-209ENST00000538039 NUTM2GQ5VZR2 741 aa17.19■□□□□ 0.34
CLPB-209ENST00000538039 LRRCC1Q9C099 1032 aa17.19■□□□□ 0.34
CLPB-209ENST00000538039 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
CLPB-209ENST00000538039 VSIG10Q8N0Z9 540 aa17.19■□□□□ 0.34
CLPB-209ENST00000538039 SLC26A8Q96RN1 970 aa17.19■□□□□ 0.34
CLPB-209ENST00000538039 USP44Q9H0E7 712 aa17.19■□□□□ 0.34
CLPB-209ENST00000538039 R3HCC1Q9Y3T6 440 aaKnown RBP17.19■□□□□ 0.34
CLPB-209ENST00000538039 PHAXQ9H814 394 aaKnown RBP17.18■□□□□ 0.34
CLPB-209ENST00000538039 ADAMTS13Q76LX8 1427 aa17.18■□□□□ 0.34
CLPB-209ENST00000538039 USP31Q70CQ4 1352 aa17.18■□□□□ 0.34
CLPB-209ENST00000538039 CCT4P50991 539 aaKnown RBP17.18■□□□□ 0.34
CLPB-209ENST00000538039 JARID2Q92833 1246 aaPredicted RBP17.18■□□□□ 0.34
CLPB-209ENST00000538039 NALCNQ8IZF0 1738 aa17.17■□□□□ 0.34
CLPB-209ENST00000538039 HMMRO75330 724 aa17.17■□□□□ 0.34
CLPB-209ENST00000538039 MSNP26038 577 aaKnown RBP17.17■□□□□ 0.34
CLPB-209ENST00000538039 ATP8B2P98198 1209 aa17.17■□□□□ 0.34
CLPB-209ENST00000538039 SSH2Q76I76 1423 aa17.17■□□□□ 0.34
CLPB-209ENST00000538039 XRN1Q8IZH2 1706 aaKnown RBP17.17■□□□□ 0.34
CLPB-209ENST00000538039 PLEKHG3A1L390 1219 aa17.17■□□□□ 0.34
CLPB-209ENST00000538039 IL17REQ8NFR9 667 aa17.17■□□□□ 0.34
CLPB-209ENST00000538039 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
CLPB-209ENST00000538039 CPA1P15085 419 aa17.16■□□□□ 0.34
CLPB-209ENST00000538039 COL9A3Q14050 684 aaPredicted RBP17.15■□□□□ 0.34
CLPB-209ENST00000538039 RTF1Q92541 710 aaKnown RBP17.15■□□□□ 0.34
CLPB-209ENST00000538039 SIRT1Q96EB6 747 aa17.15■□□□□ 0.34
CLPB-209ENST00000538039 TOPAZ1Q8N9V7 1692 aa17.15■□□□□ 0.34
CLPB-209ENST00000538039 AGLP35573 1532 aa17.15■□□□□ 0.34
CLPB-209ENST00000538039 ANP32BQ92688 251 aaKnown RBP17.15■□□□□ 0.34
CLPB-209ENST00000538039 RGPD8O14715 1765 aaPredicted RBP17.15■□□□□ 0.34
CLPB-209ENST00000538039 USP48Q86UV5 1035 aa17.15■□□□□ 0.34
CLPB-209ENST00000538039 RASEFQ8IZ41 740 aa17.15■□□□□ 0.34
CLPB-209ENST00000538039 ZNF500O60304 480 aaPredicted RBP17.14■□□□□ 0.33
CLPB-209ENST00000538039 USHBP1Q8N6Y0 703 aa17.14■□□□□ 0.33
CLPB-209ENST00000538039 ZNF830Q96NB3 372 aaPredicted RBP17.14■□□□□ 0.33
CLPB-209ENST00000538039 ZMYND15Q9H091 742 aa17.14■□□□□ 0.33
CLPB-209ENST00000538039 STAP2Q9UGK3 403 aa17.14■□□□□ 0.33
CLPB-209ENST00000538039 TPM2P07951 284 aa17.13■□□□□ 0.33
CLPB-209ENST00000538039 ZKSCAN5Q9Y2L8 839 aa17.13■□□□□ 0.33
CLPB-209ENST00000538039 KDRP35968 1356 aa17.13■□□□□ 0.33
CLPB-209ENST00000538039 RPAP1Q9BWH6 1393 aaPredicted RBP17.13■□□□□ 0.33
CLPB-209ENST00000538039 ARHGEF10O15013 1369 aa17.13■□□□□ 0.33
CLPB-209ENST00000538039 IGSF1Q8N6C5 1336 aa17.12■□□□□ 0.33
CLPB-209ENST00000538039 FMN2Q9NZ56 1722 aa17.12■□□□□ 0.33
CLPB-209ENST00000538039 LTV1Q96GA3 475 aaPredicted RBP17.12■□□□□ 0.33
CLPB-209ENST00000538039 FAM208AQ9UK61 1670 aaKnown RBP17.12■□□□□ 0.33
CLPB-209ENST00000538039 TMEM2Q9UHN6 1383 aa17.12■□□□□ 0.33
CLPB-209ENST00000538039 NBPF7P0C2Y1 421 aaPredicted RBP17.12■□□□□ 0.33
CLPB-209ENST00000538039 HAP1P54257 671 aaPredicted RBP17.12■□□□□ 0.33
CLPB-209ENST00000538039 PI4K2BQ8TCG2 481 aa17.12■□□□□ 0.33
CLPB-209ENST00000538039 SOS1Q07889 1333 aaPredicted RBP17.11■□□□□ 0.33
CLPB-209ENST00000538039 LARGE1O95461 756 aa17.11■□□□□ 0.33
CLPB-209ENST00000538039 STK31Q9BXU1 1019 aa17.11■□□□□ 0.33
CLPB-209ENST00000538039 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
CLPB-209ENST00000538039 ANXA1P04083 346 aa17.11■□□□□ 0.33
CLPB-209ENST00000538039 CNPY2Q9Y2B0 182 aa17.11■□□□□ 0.33
CLPB-209ENST00000538039 DIP2BQ9P265 1576 aa17.11■□□□□ 0.33
CLPB-209ENST00000538039 HS1BP3Q53T59 392 aa17.1■□□□□ 0.33
CLPB-209ENST00000538039 PPP1R42Q7Z4L9 355 aa17.1■□□□□ 0.33
CLPB-209ENST00000538039 C17orf53Q8N3J3 647 aaPredicted RBP17.1■□□□□ 0.33
CLPB-209ENST00000538039 DDX54Q8TDD1 881 aaKnown RBP17.1■□□□□ 0.33
CLPB-209ENST00000538039 PPP6R1Q9UPN7 881 aa17.1■□□□□ 0.33
CLPB-209ENST00000538039 HSPA4P34932 840 aa17.1■□□□□ 0.33
CLPB-209ENST00000538039 AMPHP49418 695 aa17.1■□□□□ 0.33
CLPB-209ENST00000538039 CEBPAP49715 358 aaPredicted RBP17.1■□□□□ 0.33
CLPB-209ENST00000538039 KCNQ3O43525 872 aa17.1■□□□□ 0.33
CLPB-209ENST00000538039 SPG7Q9UQ90 795 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms