RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 TTC21AQ8NDW8 1320 aa13.86□□□□□ -0.19
SEMA4D-221ENST00000537934 BMP2KLQ5H9B9 411 aa13.85□□□□□ -0.19
SEMA4D-221ENST00000537934 FTSJ3Q8IY81 847 aaKnown RBP13.85□□□□□ -0.19
SEMA4D-221ENST00000537934 AATKQ6ZMQ8 1374 aa13.85□□□□□ -0.19
SEMA4D-221ENST00000537934 FOXO3O43524 673 aa13.85□□□□□ -0.19
SEMA4D-221ENST00000537934 FEZ1Q99689 392 aa13.85□□□□□ -0.19
SEMA4D-221ENST00000537934 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
SEMA4D-221ENST00000537934 DIAPH1O60610 1272 aaKnown RBP13.84□□□□□ -0.19
SEMA4D-221ENST00000537934 PRPF40AO75400 957 aaKnown RBP13.84□□□□□ -0.19
SEMA4D-221ENST00000537934 CDK11BP21127 795 aaKnown RBP13.84□□□□□ -0.19
SEMA4D-221ENST00000537934 NUCB1Q02818 461 aa13.84□□□□□ -0.19
SEMA4D-221ENST00000537934 SYCE3A1L190 88 aa13.84□□□□□ -0.19
SEMA4D-221ENST00000537934 PHF23Q9BUL5 403 aaPredicted RBP13.84□□□□□ -0.19
SEMA4D-221ENST00000537934 TMEM63CQ9P1W3 806 aa13.84□□□□□ -0.19
SEMA4D-221ENST00000537934 NLRP6P59044 892 aa13.84□□□□□ -0.19
SEMA4D-221ENST00000537934 ZNF771Q7L3S4 317 aaPredicted RBP13.84□□□□□ -0.19
SEMA4D-221ENST00000537934 ANKRD7Q92527 254 aa13.84□□□□□ -0.19
SEMA4D-221ENST00000537934 C1orf167Q5SNV9 1468 aa13.83□□□□□ -0.2
SEMA4D-221ENST00000537934 ABTB2Q8N961 1025 aa13.83□□□□□ -0.2
SEMA4D-221ENST00000537934 SPTLC3Q9NUV7 552 aa13.83□□□□□ -0.2
SEMA4D-221ENST00000537934 DDX19BQ9UMR2 479 aa13.83□□□□□ -0.2
SEMA4D-221ENST00000537934 RRP7AQ9Y3A4 280 aaKnown RBP13.83□□□□□ -0.2
SEMA4D-221ENST00000537934 ATF3P18847 181 aa13.83□□□□□ -0.2
SEMA4D-221ENST00000537934 PSME1Q06323 249 aa13.83□□□□□ -0.2
SEMA4D-221ENST00000537934 FKBP5Q13451 457 aaPredicted RBP13.83□□□□□ -0.2
SEMA4D-221ENST00000537934 NEUROD2Q15784 382 aa13.83□□□□□ -0.2
SEMA4D-221ENST00000537934 CWC22Q9HCG8 908 aaKnown RBP13.83□□□□□ -0.2
SEMA4D-221ENST00000537934 USP31Q70CQ4 1352 aa13.82□□□□□ -0.2
SEMA4D-221ENST00000537934 XIRP1Q702N8 1843 aaKnown RBP13.82□□□□□ -0.2
SEMA4D-221ENST00000537934 CDK12Q9NYV4 1490 aaPredicted RBP13.82□□□□□ -0.2
SEMA4D-221ENST00000537934 AK9Q5TCS8 1911 aa13.82□□□□□ -0.2
SEMA4D-221ENST00000537934 GABPB1Q06547 395 aaPredicted RBP13.82□□□□□ -0.2
SEMA4D-221ENST00000537934 RUNDC1Q96C34 613 aa13.82□□□□□ -0.2
SEMA4D-221ENST00000537934 OGFRQ9NZT2 677 aa13.82□□□□□ -0.2
SEMA4D-221ENST00000537934 U2AF2P26368 475 aaKnown RBP eCLIP13.81□□□□□ -0.2
SEMA4D-221ENST00000537934 SLC20A2Q08357 652 aa13.81□□□□□ -0.2
SEMA4D-221ENST00000537934 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
SEMA4D-221ENST00000537934 MST1RQ04912 1400 aa13.81□□□□□ -0.2
SEMA4D-221ENST00000537934 MARF1Q9Y4F3 1742 aaKnown RBP13.81□□□□□ -0.2
SEMA4D-221ENST00000537934 FAM177BA6PVY3 158 aa13.81□□□□□ -0.2
SEMA4D-221ENST00000537934 ZBTB22O15209 634 aa13.81□□□□□ -0.2
SEMA4D-221ENST00000537934 IGSF3O75054 1194 aa13.81□□□□□ -0.2
SEMA4D-221ENST00000537934 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
SEMA4D-221ENST00000537934 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
SEMA4D-221ENST00000537934 IQSEC2Q5JU85 1478 aa13.8□□□□□ -0.2
SEMA4D-221ENST00000537934 PEAK1Q9H792 1746 aa13.8□□□□□ -0.2
SEMA4D-221ENST00000537934 ZBTB7CA1YPR0 619 aa13.8□□□□□ -0.2
SEMA4D-221ENST00000537934 MBD3O95983 291 aa13.8□□□□□ -0.2
SEMA4D-221ENST00000537934 IRX5P78411 483 aaPredicted RBP13.8□□□□□ -0.2
SEMA4D-221ENST00000537934 RABEP1Q15276 862 aa13.8□□□□□ -0.2
SEMA4D-221ENST00000537934 CHD1LQ86WJ1 897 aa13.8□□□□□ -0.2
SEMA4D-221ENST00000537934 DDX17Q92841 729 aaKnown RBP13.8□□□□□ -0.2
SEMA4D-221ENST00000537934 LRRC7Q96NW7 1537 aa13.8□□□□□ -0.2
SEMA4D-221ENST00000537934 MAP3K19Q56UN5 1328 aa13.8□□□□□ -0.2
SEMA4D-221ENST00000537934 IL13P35225 146 aa13.79□□□□□ -0.2
SEMA4D-221ENST00000537934 CCDC27Q2M243 656 aa13.79□□□□□ -0.2
SEMA4D-221ENST00000537934 TBC1D9Q6ZT07 1266 aa13.79□□□□□ -0.2
SEMA4D-221ENST00000537934 TSPY26PQ9H489 355 aa13.79□□□□□ -0.2
SEMA4D-221ENST00000537934 DIAPH3Q9NSV4 1193 aa13.79□□□□□ -0.2
SEMA4D-221ENST00000537934 MSH6P52701 1360 aa13.79□□□□□ -0.2
SEMA4D-221ENST00000537934 HMOX1P09601 288 aa13.79□□□□□ -0.2
SEMA4D-221ENST00000537934 PKP1Q13835 747 aa13.79□□□□□ -0.2
SEMA4D-221ENST00000537934 HSP90AB2PQ58FF8 381 aa13.79□□□□□ -0.2
SEMA4D-221ENST00000537934 PLEKHF1Q96S99 279 aa13.79□□□□□ -0.2
SEMA4D-221ENST00000537934 LNPKQ9C0E8 428 aa13.79□□□□□ -0.2
SEMA4D-221ENST00000537934 DCCP43146 1447 aa13.79□□□□□ -0.2
SEMA4D-221ENST00000537934 CT47B1P0C2W7 299 aaPredicted RBP13.78□□□□□ -0.2
SEMA4D-221ENST00000537934 CTIFO43310 598 aaKnown RBP13.78□□□□□ -0.2
SEMA4D-221ENST00000537934 CADPS2Q86UW7 1296 aa13.78□□□□□ -0.2
SEMA4D-221ENST00000537934 ITPRIPQ8IWB1 547 aa13.78□□□□□ -0.2
SEMA4D-221ENST00000537934 UVSSAQ2YD98 709 aa13.77□□□□□ -0.2
SEMA4D-221ENST00000537934 TRIM27P14373 513 aa13.77□□□□□ -0.21
SEMA4D-221ENST00000537934 DNAJC2Q99543 621 aaKnown RBP13.77□□□□□ -0.21
SEMA4D-221ENST00000537934 ZBTB40Q9NUA8 1239 aa13.77□□□□□ -0.21
SEMA4D-221ENST00000537934 NSFL1CQ9UNZ2 370 aaKnown RBP13.77□□□□□ -0.21
SEMA4D-221ENST00000537934 CCDC66A2RUB6 948 aa13.77□□□□□ -0.21
SEMA4D-221ENST00000537934 LMOD2Q6P5Q4 547 aa13.77□□□□□ -0.21
SEMA4D-221ENST00000537934 KCNJ4P48050 445 aa13.76□□□□□ -0.21
SEMA4D-221ENST00000537934 CHAF1AQ13111 956 aaPredicted RBP13.76□□□□□ -0.21
SEMA4D-221ENST00000537934 EIF4A2Q14240 407 aaKnown RBP13.76□□□□□ -0.21
SEMA4D-221ENST00000537934 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
SEMA4D-221ENST00000537934 ZDHHC9Q9Y397 364 aa13.76□□□□□ -0.21
SEMA4D-221ENST00000537934 SLFN14P0C7P3 912 aa13.76□□□□□ -0.21
SEMA4D-221ENST00000537934 PRKAR2BP31323 418 aa13.76□□□□□ -0.21
SEMA4D-221ENST00000537934 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
SEMA4D-221ENST00000537934 KRT28Q7Z3Y7 464 aa13.76□□□□□ -0.21
SEMA4D-221ENST00000537934 KIF1AQ12756 1690 aa13.75□□□□□ -0.21
SEMA4D-221ENST00000537934 RIOK3O14730 519 aaKnown RBP13.75□□□□□ -0.21
SEMA4D-221ENST00000537934 FAM184AQ8NB25 1140 aa13.75□□□□□ -0.21
SEMA4D-221ENST00000537934 USP54Q70EL1 1684 aa13.75□□□□□ -0.21
SEMA4D-221ENST00000537934 ATF7IPQ6VMQ6 1270 aa13.75□□□□□ -0.21
SEMA4D-221ENST00000537934 AMPHP49418 695 aa13.74□□□□□ -0.21
SEMA4D-221ENST00000537934 C17orf53Q8N3J3 647 aaPredicted RBP13.74□□□□□ -0.21
SEMA4D-221ENST00000537934 SYAP1Q96A49 352 aaPredicted RBP13.74□□□□□ -0.21
SEMA4D-221ENST00000537934 TTC12Q9H892 705 aaPredicted RBP13.74□□□□□ -0.21
SEMA4D-221ENST00000537934 TRPM3Q9HCF6 1732 aaPredicted RBP13.74□□□□□ -0.21
SEMA4D-221ENST00000537934 FCHSD2O94868 740 aa13.74□□□□□ -0.21
SEMA4D-221ENST00000537934 SMC4Q9NTJ3 1288 aa13.74□□□□□ -0.21
SEMA4D-221ENST00000537934 SBNO1A3KN83 1393 aa13.74□□□□□ -0.21
SEMA4D-221ENST00000537934 SYCP1Q15431 976 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms