RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 ARHGEF12Q9NZN5 1544 aa3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 MAP3K4Q9Y6R4 1608 aa3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ERVH48-1M5A8F1 160 aa3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CAPN5O15484 640 aaPredicted RBP3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 RFX1P22670 979 aa3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 RELBQ01201 579 aa3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CBLBQ13191 982 aa3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 NR5A1Q13285 461 aa3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 FNBP4Q8N3X1 1017 aaPredicted RBP3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 ZNF784Q8NCA9 323 aaPredicted RBP3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PGPEP1Q9NXJ5 209 aa3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 CEP126Q9P2H0 1117 aa3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PCF11O94913 1555 aaKnown RBP3.97□□□□□ -1.77
TNFRSF1A-210ENST00000537842 PLCH2O75038 1416 aa3.96□□□□□ -1.77
TNFRSF1A-210ENST00000537842 KIF14Q15058 1648 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 USP17L5A8MUK1 530 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 AXIN1O15169 862 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 PDIA4P13667 645 aaKnown RBP3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 TIMP2P16035 220 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 SOX11P35716 441 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 GRM5P41594 1212 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 SCTRP47872 440 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 HNRNPMP52272 730 aaKnown RBP eCLIP3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 DHX9Q08211 1270 aaKnown RBP3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 LAPTM4AQ15012 233 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 PPARGC1BQ86YN6 1023 aaKnown RBP3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CCDC82Q8N4S0 544 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 PLPP7Q8NBV4 271 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 AGBL1Q96MI9 1066 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CCDC85AQ96PX6 553 aaPredicted RBP3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CDK15Q96Q40 435 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 UCN2Q96RP3 112 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 RAB6BQ9NRW1 208 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 EMILIN1Q9Y6C2 1016 aa3.96□□□□□ -1.78
TNFRSF1A-210ENST00000537842 AKNAQ7Z591 1439 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 GPATCH8Q9UKJ3 1502 aaKnown RBP3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 TTC37Q6PGP7 1564 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 UPP2O95045 317 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 MYCP01106 439 aaPredicted RBP3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 MYT1Q01538 1121 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 NCOA4Q13772 614 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CDCA8Q53HL2 280 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 RNF20Q5VTR2 975 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 EFCAB2Q5VUJ9 269 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 TBC1D9Q6ZT07 1266 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CDCA7Q9BWT1 371 aaPredicted RBP3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ALG2Q9H553 416 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CDK11AQ9UQ88 783 aaPredicted RBP3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ABCA9Q8IUA7 1624 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ARAP3Q8WWN8 1544 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 VPS8Q8N3P4 1428 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 YEATS2Q9ULM3 1422 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 TRAPPC8Q9Y2L5 1435 aa3.95□□□□□ -1.78
TNFRSF1A-210ENST00000537842 FYCO1Q9BQS8 1478 aa3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 USP17L3A6NCW0 530 aa3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 USP17L4A6NCW7 530 aa3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ESPNB1AK53 854 aa3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 MEN1O00255 615 aa3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 STAU1O95793 577 aaKnown RBP3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 BMP2P12643 396 aa3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 LMOD1P29536 600 aaPredicted RBP3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 EML3Q32P44 896 aa3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 TSGA10IPQ3SY00 556 aa3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 USP17L2Q6R6M4 530 aa3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 USP17L1Q7RTZ2 530 aa3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ZNF594Q96JF6 807 aaPredicted RBP3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 PURBQ96QR8 312 aaKnown RBP3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ZNF395Q9H8N7 513 aaPredicted RBP3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ARHGEF10LQ9HCE6 1279 aa3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 POLMQ9NP87 494 aaPredicted RBP3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 SCAPERQ9BY12 1400 aa3.94□□□□□ -1.78
TNFRSF1A-210ENST00000537842 FANCAO15360 1455 aa3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 NEO1Q92859 1461 aa3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 PHLDB1Q86UU1 1377 aa3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 PALM3A6NDB9 673 aaPredicted RBP3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 DGAT1O75907 488 aa3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 MCCD1P59942 119 aaPredicted RBP3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 TRIM26Q12899 539 aaPredicted RBP3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CC2D2BQ6DHV5 1058 aa3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 SEPT12Q8IYM1 358 aa3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 LINC00528Q8N1L1 170 aa3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 MEIOBQ8N635 442 aa3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 TFIP11Q9UBB9 837 aaKnown RBP3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 CFDP1Q9UEE9 299 aaPredicted RBP3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 DACH1Q9UI36 760 aa3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 FRMPD1Q5SYB0 1578 aa3.93□□□□□ -1.78
TNFRSF1A-210ENST00000537842 LRRC9Q6ZRR7 1453 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 TEX14Q8IWB6 1497 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 MBD5Q9P267 1494 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 HECW1Q76N89 1606 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 MTUS2Q5JR59 1369 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ATP9BO43861 1147 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 ADH1AP07327 375 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 GTF2IP78347 998 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 SCARF1Q14162 830 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 MPNDQ8N594 471 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 PPP1R12CQ9BZL4 782 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 AAASQ9NRG9 546 aa3.92□□□□□ -1.78
TNFRSF1A-210ENST00000537842 MAFBQ9Y5Q3 323 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms