RNA–Protein interactions for RNA: ENST00000537750.5

SYNE1-236, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-236ENST00000537750 TRIM6-TRIM34B2RNG4 842 aa18.04■□□□□ 0.48
SYNE1-236ENST00000537750 SLC4A10Q6U841 1118 aa18.04■□□□□ 0.48
SYNE1-236ENST00000537750 LARP6Q9BRS8 491 aaKnown RBP18.04■□□□□ 0.48
SYNE1-236ENST00000537750 PYCARDQ9ULZ3 195 aa18.04■□□□□ 0.48
SYNE1-236ENST00000537750 MCCP23508 829 aa18.04■□□□□ 0.48
SYNE1-236ENST00000537750 PDCL2Q8N4E4 241 aa18.04■□□□□ 0.48
SYNE1-236ENST00000537750 OSBPL3Q9H4L5 887 aa18.04■□□□□ 0.48
SYNE1-236ENST00000537750 F6X3S4 739 aa18.03■□□□□ 0.48
SYNE1-236ENST00000537750 KDM4AO75164 1064 aa18.03■□□□□ 0.48
SYNE1-236ENST00000537750 LMOD3Q0VAK6 560 aa18.03■□□□□ 0.48
SYNE1-236ENST00000537750 RRS1Q15050 365 aaKnown RBP18.03■□□□□ 0.48
SYNE1-236ENST00000537750 NEXMIFQ5QGS0 1516 aa18.03■□□□□ 0.48
SYNE1-236ENST00000537750 WDR33Q9C0J8 1336 aaKnown RBP18.03■□□□□ 0.48
SYNE1-236ENST00000537750 RIOK3O14730 519 aaKnown RBP18.03■□□□□ 0.48
SYNE1-236ENST00000537750 MX1P20591 662 aa18.03■□□□□ 0.48
SYNE1-236ENST00000537750 U2AF2P26368 475 aaKnown RBP eCLIP18.03■□□□□ 0.48
SYNE1-236ENST00000537750 SPC24Q8NBT2 197 aa18.03■□□□□ 0.48
SYNE1-236ENST00000537750 GIMAP6Q6P9H5 292 aa18.02■□□□□ 0.48
SYNE1-236ENST00000537750 KCNF1Q9H3M0 494 aa18.02■□□□□ 0.48
SYNE1-236ENST00000537750 PTPRMP28827 1452 aa18.02■□□□□ 0.48
SYNE1-236ENST00000537750 CHMLP26374 656 aa18.02■□□□□ 0.48
SYNE1-236ENST00000537750 NME9Q86XW9 330 aa18.02■□□□□ 0.48
SYNE1-236ENST00000537750 IL25Q9H293 177 aa18.02■□□□□ 0.48
SYNE1-236ENST00000537750 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
SYNE1-236ENST00000537750 UNC5CLQ8IV45 518 aa18.01■□□□□ 0.47
SYNE1-236ENST00000537750 GTPBP4Q9BZE4 634 aaKnown RBP18.01■□□□□ 0.47
SYNE1-236ENST00000537750 HMMRO75330 724 aa18.01■□□□□ 0.47
SYNE1-236ENST00000537750 MCM10Q7L590 875 aa18.01■□□□□ 0.47
SYNE1-236ENST00000537750 KIAA1524Q8TCG1 905 aa18.01■□□□□ 0.47
SYNE1-236ENST00000537750 FIBPO43427 364 aa18■□□□□ 0.47
SYNE1-236ENST00000537750 MAP2P11137 1827 aaKnown RBP18■□□□□ 0.47
SYNE1-236ENST00000537750 G2E3Q7L622 706 aa18■□□□□ 0.47
SYNE1-236ENST00000537750 ANAPC15P60006 121 aa17.99■□□□□ 0.47
SYNE1-236ENST00000537750 AEBP1Q8IUX7 1158 aa17.99■□□□□ 0.47
SYNE1-236ENST00000537750 MIS18AQ9NYP9 233 aa17.99■□□□□ 0.47
SYNE1-236ENST00000537750 RPAP1Q9BWH6 1393 aaPredicted RBP17.99■□□□□ 0.47
SYNE1-236ENST00000537750 DLG5Q8TDM6 1919 aa17.99■□□□□ 0.47
SYNE1-236ENST00000537750 SALL3Q9BXA9 1300 aa17.97■□□□□ 0.47
SYNE1-236ENST00000537750 WAPLQ7Z5K2 1190 aa17.97■□□□□ 0.47
SYNE1-236ENST00000537750 TMEM87AQ8NBN3 555 aa17.97■□□□□ 0.47
SYNE1-236ENST00000537750 ZSCAN22P10073 491 aaPredicted RBP17.97■□□□□ 0.47
SYNE1-236ENST00000537750 UBE2HP62256 183 aa17.97■□□□□ 0.47
SYNE1-236ENST00000537750 KIF20BQ96Q89 1820 aa17.96■□□□□ 0.47
SYNE1-236ENST00000537750 KIF20AO95235 890 aa17.96■□□□□ 0.47
SYNE1-236ENST00000537750 LRRCC1Q9C099 1032 aa17.96■□□□□ 0.47
SYNE1-236ENST00000537750 DIAPH3Q9NSV4 1193 aa17.96■□□□□ 0.47
SYNE1-236ENST00000537750 SIGLEC1Q9BZZ2 1709 aa17.96■□□□□ 0.47
SYNE1-236ENST00000537750 PTPRCP08575 1304 aa17.96■□□□□ 0.47
SYNE1-236ENST00000537750 CHL1O00533 1208 aa17.96■□□□□ 0.47
SYNE1-236ENST00000537750 CHAF1AQ13111 956 aaPredicted RBP17.96■□□□□ 0.47
SYNE1-236ENST00000537750 FUCA2Q9BTY2 467 aa17.96■□□□□ 0.47
SYNE1-236ENST00000537750 LETM1O95202 739 aaPredicted RBP17.95■□□□□ 0.46
SYNE1-236ENST00000537750 MAP4K4O95819 1239 aaPredicted RBP17.95■□□□□ 0.46
SYNE1-236ENST00000537750 SYT1P21579 422 aa17.95■□□□□ 0.46
SYNE1-236ENST00000537750 ANKRD7Q92527 254 aa17.95■□□□□ 0.46
SYNE1-236ENST00000537750 FRMPD1Q5SYB0 1578 aa17.95■□□□□ 0.46
SYNE1-236ENST00000537750 PNMA6EA0A0J9YXQ4 647 aa17.95■□□□□ 0.46
SYNE1-236ENST00000537750 CPSF1Q10570 1443 aaKnown RBP17.94■□□□□ 0.46
SYNE1-236ENST00000537750 POGZQ7Z3K3 1410 aa17.94■□□□□ 0.46
SYNE1-236ENST00000537750 STX6O43752 255 aa17.94■□□□□ 0.46
SYNE1-236ENST00000537750 SULT6B1Q6IMI4 303 aa17.94■□□□□ 0.46
SYNE1-236ENST00000537750 HECW2Q9P2P5 1572 aa17.94■□□□□ 0.46
SYNE1-236ENST00000537750 KIAA0232Q92628 1395 aa17.93■□□□□ 0.46
SYNE1-236ENST00000537750 GNAI2P04899 355 aa17.93■□□□□ 0.46
SYNE1-236ENST00000537750 PIK3C2BO00750 1634 aa17.93■□□□□ 0.46
SYNE1-236ENST00000537750 CPA1P15085 419 aa17.93■□□□□ 0.46
SYNE1-236ENST00000537750 DNM1Q05193 864 aaKnown RBP17.93■□□□□ 0.46
SYNE1-236ENST00000537750 BCL11BQ9C0K0 894 aaPredicted RBP17.93■□□□□ 0.46
SYNE1-236ENST00000537750 F13A1P00488 732 aa17.92■□□□□ 0.46
SYNE1-236ENST00000537750 PTGS1P23219 599 aa17.92■□□□□ 0.46
SYNE1-236ENST00000537750 IL1RAPL2Q9NP60 686 aa17.92■□□□□ 0.46
SYNE1-236ENST00000537750 CHMP3Q9Y3E7 222 aa17.92■□□□□ 0.46
SYNE1-236ENST00000537750 HSPA4P34932 840 aa17.92■□□□□ 0.46
SYNE1-236ENST00000537750 AK2P54819 239 aa17.92■□□□□ 0.46
SYNE1-236ENST00000537750 NCKAP5LQ9HCH0 1330 aa17.91■□□□□ 0.46
SYNE1-236ENST00000537750 CTIFO43310 598 aaKnown RBP17.91■□□□□ 0.46
SYNE1-236ENST00000537750 HAP1P54257 671 aaPredicted RBP17.91■□□□□ 0.46
SYNE1-236ENST00000537750 NAA30Q147X3 362 aaPredicted RBP17.91■□□□□ 0.46
SYNE1-236ENST00000537750 RUFY3Q7L099 469 aa17.91■□□□□ 0.46
SYNE1-236ENST00000537750 ASXL2Q76L83 1435 aa17.91■□□□□ 0.46
SYNE1-236ENST00000537750 NCBP1Q09161 790 aaKnown RBP17.9■□□□□ 0.46
SYNE1-236ENST00000537750 RASEFQ8IZ41 740 aa17.9■□□□□ 0.46
SYNE1-236ENST00000537750 LARGE1O95461 756 aa17.9■□□□□ 0.46
SYNE1-236ENST00000537750 SMC3Q9UQE7 1217 aa17.9■□□□□ 0.46
SYNE1-236ENST00000537750 SNX14Q9Y5W7 946 aa17.9■□□□□ 0.46
SYNE1-236ENST00000537750 CLTCQ00610 1675 aaKnown RBP17.89■□□□□ 0.46
SYNE1-236ENST00000537750 LRMPQ12912 555 aa17.89■□□□□ 0.46
SYNE1-236ENST00000537750 NUTM1Q86Y26 1132 aa17.89■□□□□ 0.46
SYNE1-236ENST00000537750 CDK12Q9NYV4 1490 aaPredicted RBP17.89■□□□□ 0.45
SYNE1-236ENST00000537750 CCT4P50991 539 aaKnown RBP17.89■□□□□ 0.45
SYNE1-236ENST00000537750 COG3Q96JB2 828 aa17.89■□□□□ 0.45
SYNE1-236ENST00000537750 C16orf45Q96MC5 204 aaPredicted RBP17.89■□□□□ 0.45
SYNE1-236ENST00000537750 SLC52A1Q9NWF4 448 aa17.89■□□□□ 0.45
SYNE1-236ENST00000537750 IL17RAQ96F46 866 aa17.89■□□□□ 0.45
SYNE1-236ENST00000537750 CAMK4Q16566 473 aa17.88■□□□□ 0.45
SYNE1-236ENST00000537750 TTC14Q96N46 770 aa17.88■□□□□ 0.45
SYNE1-236ENST00000537750 NRBP1Q9UHY1 535 aa17.88■□□□□ 0.45
SYNE1-236ENST00000537750 SSH2Q76I76 1423 aa17.88■□□□□ 0.45
SYNE1-236ENST00000537750 ZNF771Q7L3S4 317 aaPredicted RBP17.87■□□□□ 0.45
SYNE1-236ENST00000537750 LUZP1Q86V48 1076 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms