RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 VIRMAQ69YN4 1812 aaKnown RBP20.14■□□□□ 0.81
SRRM4-202ENST00000537597 SIPA1L3O60292 1781 aaPredicted RBP20.14■□□□□ 0.81
SRRM4-202ENST00000537597 CABP4P57796 275 aa20.14■□□□□ 0.81
SRRM4-202ENST00000537597 NFE2L2Q16236 605 aa20.14■□□□□ 0.81
SRRM4-202ENST00000537597 LOC102724428A0A0B4J2F2 783 aa20.11■□□□□ 0.81
SRRM4-202ENST00000537597 KCNQ4P56696 695 aa20.11■□□□□ 0.81
SRRM4-202ENST00000537597 SIK1P57059 783 aa20.11■□□□□ 0.81
SRRM4-202ENST00000537597 SLC15A2Q16348 729 aa20.11■□□□□ 0.81
SRRM4-202ENST00000537597 RUNDC1Q96C34 613 aa20.11■□□□□ 0.81
SRRM4-202ENST00000537597 DLG5Q8TDM6 1919 aa20.1■□□□□ 0.81
SRRM4-202ENST00000537597 TMPOP42166 694 aaKnown RBP20.1■□□□□ 0.81
SRRM4-202ENST00000537597 SRCAPQ6ZRS2 3230 aa20.1■□□□□ 0.81
SRRM4-202ENST00000537597 CICQ96RK0 1608 aaPredicted RBP20.09■□□□□ 0.81
SRRM4-202ENST00000537597 TAF1LQ8IZX4 1826 aa20.09■□□□□ 0.81
SRRM4-202ENST00000537597 ITPK1Q13572 414 aa20.09■□□□□ 0.81
SRRM4-202ENST00000537597 ZNF827Q17R98 1081 aa20.09■□□□□ 0.81
SRRM4-202ENST00000537597 CCNL1Q9UK58 526 aaPredicted RBP20.09■□□□□ 0.81
SRRM4-202ENST00000537597 KCPQ6ZWJ8 1503 aa20.08■□□□□ 0.81
SRRM4-202ENST00000537597 NBPF14Q5TI25 921 aa20.08■□□□□ 0.81
SRRM4-202ENST00000537597 DCTN1Q14203 1278 aa20.07■□□□□ 0.8
SRRM4-202ENST00000537597 R3HDM1Q15032 1099 aaKnown RBP20.07■□□□□ 0.8
SRRM4-202ENST00000537597 WDR43Q15061 677 aaKnown RBP eCLIP20.07■□□□□ 0.8
SRRM4-202ENST00000537597 MCM10Q7L590 875 aa20.07■□□□□ 0.8
SRRM4-202ENST00000537597 TRIM35Q9UPQ4 493 aa20.07■□□□□ 0.8
SRRM4-202ENST00000537597 UBR2Q8IWV8 1755 aa20.06■□□□□ 0.8
SRRM4-202ENST00000537597 SLC39A6Q13433 755 aa20.05■□□□□ 0.8
SRRM4-202ENST00000537597 CCDC146Q8IYE0 955 aa20.05■□□□□ 0.8
SRRM4-202ENST00000537597 LINC00116Q8NCU8 138 aa20.05■□□□□ 0.8
SRRM4-202ENST00000537597 QSER1Q2KHR3 1735 aa20.05■□□□□ 0.8
SRRM4-202ENST00000537597 CASZ1Q86V15 1759 aa20.04■□□□□ 0.8
SRRM4-202ENST00000537597 PSDA5PKW4 1024 aaPredicted RBP20.04■□□□□ 0.8
SRRM4-202ENST00000537597 NCBP3Q53F19 620 aaKnown RBP20.04■□□□□ 0.8
SRRM4-202ENST00000537597 PDGFDQ9GZP0 370 aaPredicted RBP20.04■□□□□ 0.8
SRRM4-202ENST00000537597 MRS2Q9HD23 443 aa20.04■□□□□ 0.8
SRRM4-202ENST00000537597 C5P01031 1676 aa20.03■□□□□ 0.8
SRRM4-202ENST00000537597 HMGB2P26583 209 aaKnown RBP20.03■□□□□ 0.8
SRRM4-202ENST00000537597 RIPK4P57078 832 aa20.03■□□□□ 0.8
SRRM4-202ENST00000537597 RC3H1Q5TC82 1133 aaKnown RBP20.03■□□□□ 0.8
SRRM4-202ENST00000537597 ZNF790Q6PG37 636 aa20.03■□□□□ 0.8
SRRM4-202ENST00000537597 AMIGO3Q86WK7 504 aa20.03■□□□□ 0.8
SRRM4-202ENST00000537597 VSIG10Q8N0Z9 540 aa20.03■□□□□ 0.8
SRRM4-202ENST00000537597 MAPK8IP3Q9UPT6 1336 aa20.02■□□□□ 0.8
SRRM4-202ENST00000537597 KCNQ3O43525 872 aa20.02■□□□□ 0.8
SRRM4-202ENST00000537597 ATP6V1AP38606 617 aa20.02■□□□□ 0.8
SRRM4-202ENST00000537597 TEFQ10587 303 aa20.02■□□□□ 0.8
SRRM4-202ENST00000537597 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
SRRM4-202ENST00000537597 RTF1Q92541 710 aaKnown RBP20.02■□□□□ 0.8
SRRM4-202ENST00000537597 STK32BQ9NY57 414 aa20.02■□□□□ 0.8
SRRM4-202ENST00000537597 HEG1Q9ULI3 1381 aa20.02■□□□□ 0.8
SRRM4-202ENST00000537597 COL5A3P25940 1745 aaPredicted RBP20.02■□□□□ 0.79
SRRM4-202ENST00000537597 NEFMP07197 916 aa20.01■□□□□ 0.79
SRRM4-202ENST00000537597 C4BP0C0L5 1744 aa20.01■□□□□ 0.79
SRRM4-202ENST00000537597 TJP1Q07157 1748 aa20.01■□□□□ 0.79
SRRM4-202ENST00000537597 PNPLA7Q6ZV29 1317 aa20.01■□□□□ 0.79
SRRM4-202ENST00000537597 CCER2I3L3R5 266 aa20■□□□□ 0.79
SRRM4-202ENST00000537597 APAF1O14727 1248 aa20■□□□□ 0.79
SRRM4-202ENST00000537597 ZNF496Q96IT1 587 aaPredicted RBP20■□□□□ 0.79
SRRM4-202ENST00000537597 TUBGCP6Q96RT7 1819 aa19.99■□□□□ 0.79
SRRM4-202ENST00000537597 MYH14Q7Z406 1995 aaKnown RBP19.99■□□□□ 0.79
SRRM4-202ENST00000537597 PTCD1O75127 700 aaKnown RBP19.99■□□□□ 0.79
SRRM4-202ENST00000537597 THUMPD2Q9BTF0 503 aaKnown RBP19.99■□□□□ 0.79
SRRM4-202ENST00000537597 BABAM1Q9NWV8 329 aa19.99■□□□□ 0.79
SRRM4-202ENST00000537597 BTBD11A6QL63 1104 aa19.98■□□□□ 0.79
SRRM4-202ENST00000537597 RBM42Q9BTD8 480 aaKnown RBP19.98■□□□□ 0.79
SRRM4-202ENST00000537597 RRP7AQ9Y3A4 280 aaKnown RBP19.98■□□□□ 0.79
SRRM4-202ENST00000537597 COL24A1Q17RW2 1714 aa19.98■□□□□ 0.79
SRRM4-202ENST00000537597 CNTNAP4Q9C0A0 1308 aa19.98■□□□□ 0.79
SRRM4-202ENST00000537597 UBR3Q6ZT12 1888 aa19.97■□□□□ 0.79
SRRM4-202ENST00000537597 CYP19A1P11511 503 aaPredicted RBP19.97■□□□□ 0.79
SRRM4-202ENST00000537597 INTS5Q6P9B9 1019 aaKnown RBP19.97■□□□□ 0.79
SRRM4-202ENST00000537597 SGIP1Q9BQI5 828 aa19.97■□□□□ 0.79
SRRM4-202ENST00000537597 KDM3BQ7LBC6 1761 aa19.96■□□□□ 0.79
SRRM4-202ENST00000537597 ZNF853P0CG23 659 aa19.96■□□□□ 0.79
SRRM4-202ENST00000537597 CCDC27Q2M243 656 aa19.96■□□□□ 0.79
SRRM4-202ENST00000537597 DIEXFQ68CQ4 756 aaKnown RBP19.96■□□□□ 0.79
SRRM4-202ENST00000537597 COL23A1Q86Y22 540 aaPredicted RBP19.96■□□□□ 0.79
SRRM4-202ENST00000537597 DNAJC10Q8IXB1 793 aa19.96■□□□□ 0.79
SRRM4-202ENST00000537597 CHL1O00533 1208 aa19.95■□□□□ 0.78
SRRM4-202ENST00000537597 LMOD3Q0VAK6 560 aa19.95■□□□□ 0.78
SRRM4-202ENST00000537597 RPS6KA4O75676 772 aa19.94■□□□□ 0.78
SRRM4-202ENST00000537597 SLC16A10Q8TF71 515 aa19.94■□□□□ 0.78
SRRM4-202ENST00000537597 MIS18AQ9NYP9 233 aa19.94■□□□□ 0.78
SRRM4-202ENST00000537597 SSFA2P28290 1259 aa19.93■□□□□ 0.78
SRRM4-202ENST00000537597 EIF4A1P60842 406 aaKnown RBP19.93■□□□□ 0.78
SRRM4-202ENST00000537597 FMNL2Q96PY5 1086 aa19.93■□□□□ 0.78
SRRM4-202ENST00000537597 TFCP2L1Q9NZI6 479 aa19.93■□□□□ 0.78
SRRM4-202ENST00000537597 LRP5O75197 1615 aa19.92■□□□□ 0.78
SRRM4-202ENST00000537597 PTGER2P43116 358 aa19.92■□□□□ 0.78
SRRM4-202ENST00000537597 CRKLP46109 303 aaKnown RBP19.92■□□□□ 0.78
SRRM4-202ENST00000537597 SMIM5Q71RC9 77 aa19.92■□□□□ 0.78
SRRM4-202ENST00000537597 NEUROD2Q15784 382 aa19.91■□□□□ 0.78
SRRM4-202ENST00000537597 TTC5Q8N0Z6 440 aa19.91■□□□□ 0.78
SRRM4-202ENST00000537597 MIER1Q8N108 512 aa19.91■□□□□ 0.78
SRRM4-202ENST00000537597 FLAD1Q8NFF5 587 aa19.91■□□□□ 0.78
SRRM4-202ENST00000537597 TEX13AQ9BXU3 409 aaPredicted RBP19.91■□□□□ 0.78
SRRM4-202ENST00000537597 PRAMEF22A3QJZ6 481 aa19.9■□□□□ 0.78
SRRM4-202ENST00000537597 USP16Q9Y5T5 823 aa19.9■□□□□ 0.78
SRRM4-202ENST00000537597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.89■□□□□ 0.77
SRRM4-202ENST00000537597 GIGYF1O75420 1035 aaPredicted RBP19.89■□□□□ 0.77
SRRM4-202ENST00000537597 WWC1Q8IX03 1113 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms