RNA–Protein interactions for RNA: ENST00000537533.1

PTPN6-209, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-209ENST00000537533 TFCP2L1Q9NZI6 479 aa16.75■□□□□ 0.27
PTPN6-209ENST00000537533 UBR3Q6ZT12 1888 aa16.75■□□□□ 0.27
PTPN6-209ENST00000537533 PTGER2P43116 358 aa16.74■□□□□ 0.27
PTPN6-209ENST00000537533 RALBP1Q15311 655 aa16.74■□□□□ 0.27
PTPN6-209ENST00000537533 SLC16A10Q8TF71 515 aa16.74■□□□□ 0.27
PTPN6-209ENST00000537533 RSPH6AQ9H0K4 717 aa16.74■□□□□ 0.27
PTPN6-209ENST00000537533 NFATC2IPQ8NCF5 419 aa16.73■□□□□ 0.27
PTPN6-209ENST00000537533 SGIP1Q9BQI5 828 aa16.73■□□□□ 0.27
PTPN6-209ENST00000537533 RNMTO43148 476 aaKnown RBP16.72■□□□□ 0.27
PTPN6-209ENST00000537533 GAS2L2Q8NHY3 880 aa16.72■□□□□ 0.27
PTPN6-209ENST00000537533 SLC52A2Q9HAB3 445 aa16.72■□□□□ 0.27
PTPN6-209ENST00000537533 LGR6Q9HBX8 967 aa16.72■□□□□ 0.27
PTPN6-209ENST00000537533 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
PTPN6-209ENST00000537533 COL5A3P25940 1745 aaPredicted RBP16.72■□□□□ 0.27
PTPN6-209ENST00000537533 CICQ96RK0 1608 aaPredicted RBP16.71■□□□□ 0.27
PTPN6-209ENST00000537533 FCHSD2O94868 740 aa16.71■□□□□ 0.27
PTPN6-209ENST00000537533 U2AF1L5P0DN76 240 aaPredicted RBP16.71■□□□□ 0.27
PTPN6-209ENST00000537533 PRKAR2BP31323 418 aa16.71■□□□□ 0.27
PTPN6-209ENST00000537533 ATP6V1AP38606 617 aa16.71■□□□□ 0.27
PTPN6-209ENST00000537533 U2AF1Q01081 240 aaKnown RBP eCLIP16.71■□□□□ 0.27
PTPN6-209ENST00000537533 ITPK1Q13572 414 aa16.71■□□□□ 0.27
PTPN6-209ENST00000537533 SIPA1L3O60292 1781 aaPredicted RBP16.7■□□□□ 0.26
PTPN6-209ENST00000537533 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
PTPN6-209ENST00000537533 LINC00116Q8NCU8 138 aa16.7■□□□□ 0.26
PTPN6-209ENST00000537533 FLAD1Q8NFF5 587 aa16.7■□□□□ 0.26
PTPN6-209ENST00000537533 PHACTR3Q96KR7 559 aa16.7■□□□□ 0.26
PTPN6-209ENST00000537533 SLC4A9Q96Q91 983 aa16.7■□□□□ 0.26
PTPN6-209ENST00000537533 MAP3K5Q99683 1374 aa16.69■□□□□ 0.26
PTPN6-209ENST00000537533 PPP1R1BQ9UD71 204 aaPredicted RBP16.69■□□□□ 0.26
PTPN6-209ENST00000537533 MYH14Q7Z406 1995 aaKnown RBP16.69■□□□□ 0.26
PTPN6-209ENST00000537533 GNAT3A8MTJ3 354 aa16.68■□□□□ 0.26
PTPN6-209ENST00000537533 AK7Q96M32 723 aa16.68■□□□□ 0.26
PTPN6-209ENST00000537533 UBR2Q8IWV8 1755 aa16.67■□□□□ 0.26
PTPN6-209ENST00000537533 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
PTPN6-209ENST00000537533 TJP1Q07157 1748 aa16.67■□□□□ 0.26
PTPN6-209ENST00000537533 CEMIPQ8WUJ3 1361 aa16.66■□□□□ 0.26
PTPN6-209ENST00000537533 SSFA2P28290 1259 aa16.66■□□□□ 0.26
PTPN6-209ENST00000537533 RC3H1Q5TC82 1133 aaKnown RBP16.66■□□□□ 0.26
PTPN6-209ENST00000537533 AMIGO3Q86WK7 504 aa16.66■□□□□ 0.26
PTPN6-209ENST00000537533 IL17REQ8NFR9 667 aa16.66■□□□□ 0.26
PTPN6-209ENST00000537533 MYBBP1AQ9BQG0 1328 aaKnown RBP16.66■□□□□ 0.26
PTPN6-209ENST00000537533 DLG5Q8TDM6 1919 aa16.65■□□□□ 0.26
PTPN6-209ENST00000537533 CNTNAP4Q9C0A0 1308 aa16.65■□□□□ 0.26
PTPN6-209ENST00000537533 KCPQ6ZWJ8 1503 aa16.65■□□□□ 0.26
PTPN6-209ENST00000537533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.64■□□□□ 0.25
PTPN6-209ENST00000537533 PTCD1O75127 700 aaKnown RBP16.64■□□□□ 0.25
PTPN6-209ENST00000537533 ARXQ96QS3 562 aa16.64■□□□□ 0.25
PTPN6-209ENST00000537533 PLEKHF1Q96S99 279 aa16.63■□□□□ 0.25
PTPN6-209ENST00000537533 GNPATO15228 680 aa16.62■□□□□ 0.25
PTPN6-209ENST00000537533 MSH5O43196 834 aa16.62■□□□□ 0.25
PTPN6-209ENST00000537533 HTATSF1O43719 755 aaKnown RBP16.62■□□□□ 0.25
PTPN6-209ENST00000537533 POLD1P28340 1107 aa16.62■□□□□ 0.25
PTPN6-209ENST00000537533 SLC39A6Q13433 755 aa16.62■□□□□ 0.25
PTPN6-209ENST00000537533 PRKRIP1Q9H875 184 aaPredicted RBP16.62■□□□□ 0.25
PTPN6-209ENST00000537533 PHF14O94880 888 aa16.61■□□□□ 0.25
PTPN6-209ENST00000537533 TEFQ10587 303 aa16.61■□□□□ 0.25
PTPN6-209ENST00000537533 VSIG10Q8N0Z9 540 aa16.61■□□□□ 0.25
PTPN6-209ENST00000537533 PNNQ9H307 717 aaKnown RBP16.61■□□□□ 0.25
PTPN6-209ENST00000537533 ADRA2BP18089 450 aa16.6■□□□□ 0.25
PTPN6-209ENST00000537533 SMIM5Q71RC9 77 aa16.6■□□□□ 0.25
PTPN6-209ENST00000537533 SYT17Q9BSW7 474 aa16.6■□□□□ 0.25
PTPN6-209ENST00000537533 FHDC1Q9C0D6 1143 aaPredicted RBP16.6■□□□□ 0.25
PTPN6-209ENST00000537533 RTCBQ9Y3I0 505 aaKnown RBP16.6■□□□□ 0.25
PTPN6-209ENST00000537533 C4AP0C0L4 1744 aa16.59■□□□□ 0.25
PTPN6-209ENST00000537533 RPS6KA4O75676 772 aa16.59■□□□□ 0.25
PTPN6-209ENST00000537533 ZNF316A6NFI3 1004 aaPredicted RBP16.58■□□□□ 0.24
PTPN6-209ENST00000537533 NEFMP07197 916 aa16.58■□□□□ 0.24
PTPN6-209ENST00000537533 CRKLP46109 303 aaKnown RBP16.58■□□□□ 0.24
PTPN6-209ENST00000537533 TRAPPC3LQ5T215 181 aa16.58■□□□□ 0.24
PTPN6-209ENST00000537533 ZNF790Q6PG37 636 aa16.58■□□□□ 0.24
PTPN6-209ENST00000537533 DNAJC10Q8IXB1 793 aa16.58■□□□□ 0.24
PTPN6-209ENST00000537533 RTF1Q92541 710 aaKnown RBP16.58■□□□□ 0.24
PTPN6-209ENST00000537533 MSL1Q68DK7 614 aa16.57■□□□□ 0.24
PTPN6-209ENST00000537533 INTS5Q6P9B9 1019 aaKnown RBP16.57■□□□□ 0.24
PTPN6-209ENST00000537533 TTC5Q8N0Z6 440 aa16.57■□□□□ 0.24
PTPN6-209ENST00000537533 CYP19A1P11511 503 aaPredicted RBP16.56■□□□□ 0.24
PTPN6-209ENST00000537533 MCM10Q7L590 875 aa16.56■□□□□ 0.24
PTPN6-209ENST00000537533 ARHGEF1Q92888 912 aaKnown RBP16.56■□□□□ 0.24
PTPN6-209ENST00000537533 HEG1Q9ULI3 1381 aa16.55■□□□□ 0.24
PTPN6-209ENST00000537533 BTBD11A6QL63 1104 aa16.55■□□□□ 0.24
PTPN6-209ENST00000537533 NFE2L2Q16236 605 aa16.55■□□□□ 0.24
PTPN6-209ENST00000537533 ZNF496Q96IT1 587 aaPredicted RBP16.55■□□□□ 0.24
PTPN6-209ENST00000537533 MAPK8IP3Q9UPT6 1336 aa16.54■□□□□ 0.24
PTPN6-209ENST00000537533 DCTN1Q14203 1278 aa16.54■□□□□ 0.24
PTPN6-209ENST00000537533 CCDC87Q9NVE4 849 aa16.54■□□□□ 0.24
PTPN6-209ENST00000537533 UTRNP46939 3433 aa16.54■□□□□ 0.24
PTPN6-209ENST00000537533 RFC4P35249 363 aa16.53■□□□□ 0.24
PTPN6-209ENST00000537533 FMNL2Q96PY5 1086 aa16.53■□□□□ 0.24
PTPN6-209ENST00000537533 TEX13AQ9BXU3 409 aaPredicted RBP16.53■□□□□ 0.24
PTPN6-209ENST00000537533 SOS1Q07889 1333 aaPredicted RBP16.52■□□□□ 0.24
PTPN6-209ENST00000537533 KDM3BQ7LBC6 1761 aa16.52■□□□□ 0.24
PTPN6-209ENST00000537533 KCNQ3O43525 872 aa16.52■□□□□ 0.24
PTPN6-209ENST00000537533 GYS1P13807 737 aa16.52■□□□□ 0.24
PTPN6-209ENST00000537533 NLGN1Q8N2Q7 840 aa16.52■□□□□ 0.24
PTPN6-209ENST00000537533 STARD3NLO95772 234 aa16.51■□□□□ 0.23
PTPN6-209ENST00000537533 TAF7Q15545 349 aaPredicted RBP16.51■□□□□ 0.23
PTPN6-209ENST00000537533 CD2APQ9Y5K6 639 aa16.51■□□□□ 0.23
PTPN6-209ENST00000537533 KIF13BQ9NQT8 1826 aa16.51■□□□□ 0.23
PTPN6-209ENST00000537533 USP42Q9H9J4 1324 aaKnown RBP16.5■□□□□ 0.23
PTPN6-209ENST00000537533 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms