RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 NUP188Q5SRE5 1749 aa25.49■■□□□ 1.67
COPS7A-205ENST00000536872 RGPD3A6NKT7 1758 aaPredicted RBP25.48■■□□□ 1.67
COPS7A-205ENST00000536872 RGPD4Q7Z3J3 1758 aa25.48■■□□□ 1.67
COPS7A-205ENST00000536872 TEFQ10587 303 aa25.47■■□□□ 1.67
COPS7A-205ENST00000536872 DCTN1Q14203 1278 aa25.47■■□□□ 1.67
COPS7A-205ENST00000536872 MCM10Q7L590 875 aa25.47■■□□□ 1.67
COPS7A-205ENST00000536872 SCN11AQ9UI33 1791 aa25.46■■□□□ 1.67
COPS7A-205ENST00000536872 NFE2L2Q16236 605 aa25.46■■□□□ 1.67
COPS7A-205ENST00000536872 LOC102724428A0A0B4J2F2 783 aa25.45■■□□□ 1.66
COPS7A-205ENST00000536872 PTCD1O75127 700 aaKnown RBP25.45■■□□□ 1.66
COPS7A-205ENST00000536872 SIK1P57059 783 aa25.45■■□□□ 1.66
COPS7A-205ENST00000536872 SLC39A6Q13433 755 aa25.45■■□□□ 1.66
COPS7A-205ENST00000536872 ATP6V1AP38606 617 aa25.44■■□□□ 1.66
COPS7A-205ENST00000536872 RRP7AQ9Y3A4 280 aaKnown RBP25.44■■□□□ 1.66
COPS7A-205ENST00000536872 NEUROD2Q15784 382 aa25.43■■□□□ 1.66
COPS7A-205ENST00000536872 SLC15A2Q16348 729 aa25.43■■□□□ 1.66
COPS7A-205ENST00000536872 RUNDC1Q96C34 613 aa25.43■■□□□ 1.66
COPS7A-205ENST00000536872 RIPK4P57078 832 aa25.42■■□□□ 1.66
COPS7A-205ENST00000536872 ZNF827Q17R98 1081 aa25.42■■□□□ 1.66
COPS7A-205ENST00000536872 LY75O60449 1722 aa25.41■■□□□ 1.66
COPS7A-205ENST00000536872 VIRMAQ69YN4 1812 aaKnown RBP25.41■■□□□ 1.66
COPS7A-205ENST00000536872 HTATSF1O43719 755 aaKnown RBP25.4■■□□□ 1.66
COPS7A-205ENST00000536872 TMPOP42166 694 aaKnown RBP25.39■■□□□ 1.66
COPS7A-205ENST00000536872 ITPK1Q13572 414 aa25.39■■□□□ 1.66
COPS7A-205ENST00000536872 THUMPD2Q9BTF0 503 aaKnown RBP25.39■■□□□ 1.66
COPS7A-205ENST00000536872 TFCP2L1Q9NZI6 479 aa25.39■■□□□ 1.66
COPS7A-205ENST00000536872 PNISRQ8TF01 805 aaKnown RBP25.38■■□□□ 1.65
COPS7A-205ENST00000536872 AKT1S1Q96B36 256 aa25.38■■□□□ 1.65
COPS7A-205ENST00000536872 SLC4A9Q96Q91 983 aa25.38■■□□□ 1.65
COPS7A-205ENST00000536872 TTC5Q8N0Z6 440 aa25.37■■□□□ 1.65
COPS7A-205ENST00000536872 PDGFDQ9GZP0 370 aaPredicted RBP25.37■■□□□ 1.65
COPS7A-205ENST00000536872 CEMIPQ8WUJ3 1361 aa25.36■■□□□ 1.65
COPS7A-205ENST00000536872 SENP3-EIF4A1A0A087X0R7 540 aa25.36■■□□□ 1.65
COPS7A-205ENST00000536872 BTBD11A6QL63 1104 aa25.36■■□□□ 1.65
COPS7A-205ENST00000536872 LINC00116Q8NCU8 138 aa25.36■■□□□ 1.65
COPS7A-205ENST00000536872 DLG5Q8TDM6 1919 aa25.35■■□□□ 1.65
COPS7A-205ENST00000536872 MRC1P22897 1456 aa25.34■■□□□ 1.65
COPS7A-205ENST00000536872 ADAMTS7Q9UKP4 1686 aa25.34■■□□□ 1.65
COPS7A-205ENST00000536872 DIEXFQ68CQ4 756 aaKnown RBP25.34■■□□□ 1.65
COPS7A-205ENST00000536872 AK7Q96M32 723 aa25.34■■□□□ 1.65
COPS7A-205ENST00000536872 MIS18AQ9NYP9 233 aa25.34■■□□□ 1.65
COPS7A-205ENST00000536872 APAF1O14727 1248 aa25.33■■□□□ 1.65
COPS7A-205ENST00000536872 MSH5O43196 834 aa25.33■■□□□ 1.65
COPS7A-205ENST00000536872 KCNQ3O43525 872 aa25.33■■□□□ 1.65
COPS7A-205ENST00000536872 HMGB2P26583 209 aaKnown RBP25.33■■□□□ 1.65
COPS7A-205ENST00000536872 TAF7Q15545 349 aaPredicted RBP25.33■■□□□ 1.65
COPS7A-205ENST00000536872 FAM9BQ8IZU0 186 aa25.33■■□□□ 1.65
COPS7A-205ENST00000536872 ZNF790Q6PG37 636 aa25.32■■□□□ 1.64
COPS7A-205ENST00000536872 SMIM5Q71RC9 77 aa25.32■■□□□ 1.64
COPS7A-205ENST00000536872 PAPPAQ13219 1627 aa25.31■■□□□ 1.64
COPS7A-205ENST00000536872 ZBTB7AO95365 584 aa25.3■■□□□ 1.64
COPS7A-205ENST00000536872 LMOD3Q0VAK6 560 aa25.3■■□□□ 1.64
COPS7A-205ENST00000536872 DNAJC10Q8IXB1 793 aa25.3■■□□□ 1.64
COPS7A-205ENST00000536872 PHF14O94880 888 aa25.29■■□□□ 1.64
COPS7A-205ENST00000536872 ZNF496Q96IT1 587 aaPredicted RBP25.29■■□□□ 1.64
COPS7A-205ENST00000536872 C5P01031 1676 aa25.29■■□□□ 1.64
COPS7A-205ENST00000536872 GNPATO15228 680 aa25.28■■□□□ 1.64
COPS7A-205ENST00000536872 PNPLA7Q6ZV29 1317 aa25.28■■□□□ 1.64
COPS7A-205ENST00000536872 TAF1LQ8IZX4 1826 aa25.28■■□□□ 1.64
COPS7A-205ENST00000536872 TRIM35Q9UPQ4 493 aa25.27■■□□□ 1.64
COPS7A-205ENST00000536872 ATF5Q9Y2D1 282 aaPredicted RBP25.27■■□□□ 1.64
COPS7A-205ENST00000536872 COL23A1Q86Y22 540 aaPredicted RBP25.26■■□□□ 1.63
COPS7A-205ENST00000536872 FMNL2Q96PY5 1086 aa25.26■■□□□ 1.63
COPS7A-205ENST00000536872 AMIGO3Q86WK7 504 aa25.25■■□□□ 1.63
COPS7A-205ENST00000536872 LAS1LQ9Y4W2 734 aaKnown RBP25.25■■□□□ 1.63
COPS7A-205ENST00000536872 C4BP0C0L5 1744 aa25.25■■□□□ 1.63
COPS7A-205ENST00000536872 SIPA1L3O60292 1781 aaPredicted RBP25.25■■□□□ 1.63
COPS7A-205ENST00000536872 CRKLP46109 303 aaKnown RBP25.24■■□□□ 1.63
COPS7A-205ENST00000536872 KCPQ6ZWJ8 1503 aa25.23■■□□□ 1.63
COPS7A-205ENST00000536872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.23■■□□□ 1.63
COPS7A-205ENST00000536872 RC3H1Q5TC82 1133 aaKnown RBP25.23■■□□□ 1.63
COPS7A-205ENST00000536872 VSIG10Q8N0Z9 540 aa25.22■■□□□ 1.63
COPS7A-205ENST00000536872 SPON1Q9HCB6 807 aa25.22■■□□□ 1.63
COPS7A-205ENST00000536872 TSPYL4Q9UJ04 414 aa25.22■■□□□ 1.63
COPS7A-205ENST00000536872 RTCBQ9Y3I0 505 aaKnown RBP25.22■■□□□ 1.63
COPS7A-205ENST00000536872 SALL2Q9Y467 1007 aaPredicted RBP25.22■■□□□ 1.63
COPS7A-205ENST00000536872 HEG1Q9ULI3 1381 aa25.21■■□□□ 1.63
COPS7A-205ENST00000536872 CNTNAP4Q9C0A0 1308 aa25.21■■□□□ 1.63
COPS7A-205ENST00000536872 CYP19A1P11511 503 aaPredicted RBP25.21■■□□□ 1.63
COPS7A-205ENST00000536872 MIER1Q8N108 512 aa25.21■■□□□ 1.63
COPS7A-205ENST00000536872 FLAD1Q8NFF5 587 aa25.21■■□□□ 1.63
COPS7A-205ENST00000536872 CCDC87Q9NVE4 849 aa25.2■■□□□ 1.62
COPS7A-205ENST00000536872 TUBGCP6Q96RT7 1819 aa25.19■■□□□ 1.62
COPS7A-205ENST00000536872 RPS6KA4O75676 772 aa25.19■■□□□ 1.62
COPS7A-205ENST00000536872 STARD3NLO95772 234 aa25.19■■□□□ 1.62
COPS7A-205ENST00000536872 TRAPPC3LQ5T215 181 aa25.19■■□□□ 1.62
COPS7A-205ENST00000536872 INTS5Q6P9B9 1019 aaKnown RBP25.19■■□□□ 1.62
COPS7A-205ENST00000536872 MTFR1LQ9H019 292 aa25.19■■□□□ 1.62
COPS7A-205ENST00000536872 PRAMEF22A3QJZ6 481 aa25.18■■□□□ 1.62
COPS7A-205ENST00000536872 SSFA2P28290 1259 aa25.18■■□□□ 1.62
COPS7A-205ENST00000536872 MSL1Q68DK7 614 aa25.18■■□□□ 1.62
COPS7A-205ENST00000536872 TEX13AQ9BXU3 409 aaPredicted RBP25.18■■□□□ 1.62
COPS7A-205ENST00000536872 MYH14Q7Z406 1995 aaKnown RBP25.17■■□□□ 1.62
COPS7A-205ENST00000536872 CCER2I3L3R5 266 aa25.17■■□□□ 1.62
COPS7A-205ENST00000536872 SNRPA1P09661 255 aaKnown RBP25.17■■□□□ 1.62
COPS7A-205ENST00000536872 CANXP27824 592 aaKnown RBP25.17■■□□□ 1.62
COPS7A-205ENST00000536872 USP16Q9Y5T5 823 aa25.17■■□□□ 1.62
COPS7A-205ENST00000536872 CASZ1Q86V15 1759 aa25.17■■□□□ 1.62
COPS7A-205ENST00000536872 TJP1Q07157 1748 aa25.17■■□□□ 1.62
COPS7A-205ENST00000536872 UBR2Q8IWV8 1755 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms