RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-213	ENST00000536843	ZBTB7B	O15156	539 aa	Predicted RBP	18.95	■□□□□ 0.62
CHFR-213	ENST00000536843	BRPF1	P55201	1214 aa	Predicted RBP	18.95	■□□□□ 0.62
CHFR-213	ENST00000536843	EID1	Q9Y6B2	187 aa		18.95	■□□□□ 0.62
CHFR-213	ENST00000536843	MON2	Q7Z3U7	1717 aa		18.95	■□□□□ 0.62
CHFR-213	ENST00000536843	FAM184A	Q8NB25	1140 aa		18.95	■□□□□ 0.62
CHFR-213	ENST00000536843	SYAP1	Q96A49	352 aa	Predicted RBP	18.95	■□□□□ 0.62
CHFR-213	ENST00000536843	TMEM51	Q9NW97	253 aa		18.95	■□□□□ 0.62
CHFR-213	ENST00000536843	PIK3R4	Q99570	1358 aa		18.95	■□□□□ 0.62
CHFR-213	ENST00000536843	ANKRD7	Q92527	254 aa		18.94	■□□□□ 0.62
CHFR-213	ENST00000536843	PLEKHG1	Q9ULL1	1385 aa		18.94	■□□□□ 0.62
CHFR-213	ENST00000536843	VAMP4	O75379	141 aa		18.94	■□□□□ 0.62
CHFR-213	ENST00000536843	TSPYL6	Q8N831	410 aa		18.93	■□□□□ 0.62
CHFR-213	ENST00000536843	SLC26A8	Q96RN1	970 aa		18.93	■□□□□ 0.62
CHFR-213	ENST00000536843	IFT57	Q9NWB7	429 aa		18.93	■□□□□ 0.62
CHFR-213	ENST00000536843	TTC21B	Q7Z4L5	1316 aa		18.93	■□□□□ 0.62
CHFR-213	ENST00000536843	GNAI1	P63096	354 aa		18.93	■□□□□ 0.62
CHFR-213	ENST00000536843	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	18.93	■□□□□ 0.62
CHFR-213	ENST00000536843	ACE	P12821	1306 aa		18.93	■□□□□ 0.62
CHFR-213	ENST00000536843	PHF14	O94880	888 aa		18.92	■□□□□ 0.62
CHFR-213	ENST00000536843	ZNF853	P0CG23	659 aa		18.92	■□□□□ 0.62
CHFR-213	ENST00000536843	MBIP	Q9NS73	344 aa		18.92	■□□□□ 0.62
CHFR-213	ENST00000536843	AKAP12	Q02952	1782 aa		18.92	■□□□□ 0.62
CHFR-213	ENST00000536843	FEZ1	Q99689	392 aa		18.92	■□□□□ 0.62
CHFR-213	ENST00000536843	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	18.91	■□□□□ 0.62
CHFR-213	ENST00000536843	ELL2	O00472	640 aa	Predicted RBP	18.91	■□□□□ 0.62
CHFR-213	ENST00000536843	SIRT2	Q8IXJ6	389 aa		18.91	■□□□□ 0.62
CHFR-213	ENST00000536843	MRPL50	Q8N5N7	158 aa	Known RBP	18.91	■□□□□ 0.62
CHFR-213	ENST00000536843	ZNF428	Q96B54	188 aa		18.91	■□□□□ 0.62
CHFR-213	ENST00000536843	INTS3	Q68E01	1043 aa	Known RBP	18.91	■□□□□ 0.62
CHFR-213	ENST00000536843	CHAMP1	Q96JM3	812 aa		18.91	■□□□□ 0.62
CHFR-213	ENST00000536843	DIAPH3	Q9NSV4	1193 aa		18.91	■□□□□ 0.62
CHFR-213	ENST00000536843	SETD1B	Q9UPS6	1966 aa	Known RBP	18.9	■□□□□ 0.62
CHFR-213	ENST00000536843	ITSN1	Q15811	1721 aa		18.9	■□□□□ 0.62
CHFR-213	ENST00000536843	FAM83G	A6ND36	823 aa		18.9	■□□□□ 0.62
CHFR-213	ENST00000536843	SPDYE4	A6NLX3	237 aa		18.9	■□□□□ 0.62
CHFR-213	ENST00000536843	PLEKHM2	Q8IWE5	1019 aa		18.9	■□□□□ 0.62
CHFR-213	ENST00000536843	PLEKHG3	A1L390	1219 aa		18.9	■□□□□ 0.62
CHFR-213	ENST00000536843	TTC22	Q5TAA0	569 aa		18.9	■□□□□ 0.62
CHFR-213	ENST00000536843	ZNF830	Q96NB3	372 aa	Predicted RBP	18.9	■□□□□ 0.62
CHFR-213	ENST00000536843	PTCH1	Q13635	1447 aa		18.89	■□□□□ 0.61
CHFR-213	ENST00000536843	PTPRU	Q92729	1446 aa		18.89	■□□□□ 0.61
CHFR-213	ENST00000536843	FAM177B	A6PVY3	158 aa		18.89	■□□□□ 0.61
CHFR-213	ENST00000536843	CTIF	O43310	598 aa	Known RBP	18.89	■□□□□ 0.61
CHFR-213	ENST00000536843	BRD1	O95696	1058 aa		18.89	■□□□□ 0.61
CHFR-213	ENST00000536843	ZBTB7C	A1YPR0	619 aa		18.89	■□□□□ 0.61
CHFR-213	ENST00000536843	LMOD3	Q0VAK6	560 aa		18.89	■□□□□ 0.61
CHFR-213	ENST00000536843	DCTN1	Q14203	1278 aa		18.89	■□□□□ 0.61
CHFR-213	ENST00000536843	EIF4A2	Q14240	407 aa	Known RBP	18.89	■□□□□ 0.61
CHFR-213	ENST00000536843	AEBP1	Q8IUX7	1158 aa		18.89	■□□□□ 0.61
CHFR-213	ENST00000536843	TTC12	Q9H892	705 aa	Predicted RBP	18.89	■□□□□ 0.61
CHFR-213	ENST00000536843	ZNF142	P52746	1687 aa	Predicted RBP	18.88	■□□□□ 0.61
CHFR-213	ENST00000536843	ARHGAP45	Q92619	1136 aa		18.88	■□□□□ 0.61
CHFR-213	ENST00000536843	U2AF2	P26368	475 aa	Known RBP eCLIP	18.87	■□□□□ 0.61
CHFR-213	ENST00000536843	C17orf53	Q8N3J3	647 aa	Predicted RBP	18.87	■□□□□ 0.61
CHFR-213	ENST00000536843	C8orf58	Q8NAV2	365 aa		18.87	■□□□□ 0.61
CHFR-213	ENST00000536843	C1orf115	Q9H7X2	142 aa		18.87	■□□□□ 0.61
CHFR-213	ENST00000536843	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.87	■□□□□ 0.61
CHFR-213	ENST00000536843	SULT6B1	Q6IMI4	303 aa		18.86	■□□□□ 0.61
CHFR-213	ENST00000536843	OGFR	Q9NZT2	677 aa		18.86	■□□□□ 0.61
CHFR-213	ENST00000536843	USP25	Q9UHP3	1055 aa		18.86	■□□□□ 0.61
CHFR-213	ENST00000536843	ADCY5	O95622	1261 aa		18.86	■□□□□ 0.61
CHFR-213	ENST00000536843	TWISTNB	Q3B726	338 aa	Predicted RBP	18.86	■□□□□ 0.61
CHFR-213	ENST00000536843	AMOTL2	Q9Y2J4	779 aa		18.86	■□□□□ 0.61
CHFR-213	ENST00000536843	GABPB1	Q06547	395 aa	Predicted RBP	18.85	■□□□□ 0.61
CHFR-213	ENST00000536843	CHAF1A	Q13111	956 aa	Predicted RBP	18.85	■□□□□ 0.61
CHFR-213	ENST00000536843	USP6	P35125	1406 aa		18.85	■□□□□ 0.61
CHFR-213	ENST00000536843	RIOK3	O14730	519 aa	Known RBP	18.85	■□□□□ 0.61
CHFR-213	ENST00000536843	OVOS2	A0A0J9YW53	1432 aa		18.85	■□□□□ 0.61
CHFR-213	ENST00000536843	OVOS2	Q6IE36	1432 aa		18.85	■□□□□ 0.61
CHFR-213	ENST00000536843	SOX12	O15370	315 aa		18.84	■□□□□ 0.61
CHFR-213	ENST00000536843	KIAA1524	Q8TCG1	905 aa		18.84	■□□□□ 0.61
CHFR-213	ENST00000536843	IPO4	Q8TEX9	1081 aa	Known RBP	18.84	■□□□□ 0.61
CHFR-213	ENST00000536843	ABCC4	O15439	1325 aa		18.84	■□□□□ 0.61
CHFR-213	ENST00000536843	HSP90AB2P	Q58FF8	381 aa		18.83	■□□□□ 0.61
CHFR-213	ENST00000536843	CASC1	Q6TDU7	716 aa		18.83	■□□□□ 0.61
CHFR-213	ENST00000536843	TBX22	Q9Y458	520 aa		18.83	■□□□□ 0.61
CHFR-213	ENST00000536843	MPND	Q8N594	471 aa		18.83	■□□□□ 0.6
CHFR-213	ENST00000536843	TOPAZ1	Q8N9V7	1692 aa		18.83	■□□□□ 0.6
CHFR-213	ENST00000536843	DLG5	Q8TDM6	1919 aa		18.83	■□□□□ 0.6
CHFR-213	ENST00000536843	NRK	Q7Z2Y5	1582 aa		18.83	■□□□□ 0.6
CHFR-213	ENST00000536843	REC8	O95072	547 aa		18.82	■□□□□ 0.6
CHFR-213	ENST00000536843	CUL4A	Q13619	759 aa		18.82	■□□□□ 0.6
CHFR-213	ENST00000536843	SYCP1	Q15431	976 aa		18.82	■□□□□ 0.6
CHFR-213	ENST00000536843	ZNF771	Q7L3S4	317 aa	Predicted RBP	18.82	■□□□□ 0.6
CHFR-213	ENST00000536843	CGN	Q9P2M7	1197 aa	Known RBP	18.82	■□□□□ 0.6
CHFR-213	ENST00000536843	MCM2	P49736	904 aa		18.82	■□□□□ 0.6
CHFR-213	ENST00000536843	FOXD4L5	Q5VV16	416 aa	Predicted RBP	18.82	■□□□□ 0.6
CHFR-213	ENST00000536843	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	18.82	■□□□□ 0.6
CHFR-213	ENST00000536843	TMX3	Q96JJ7	454 aa		18.82	■□□□□ 0.6
CHFR-213	ENST00000536843	DIP2A	Q14689	1571 aa		18.82	■□□□□ 0.6
CHFR-213	ENST00000536843	TPM3	P06753	285 aa		18.81	■□□□□ 0.6
CHFR-213	ENST00000536843	KLHL34	Q8N239	644 aa		18.81	■□□□□ 0.6
CHFR-213	ENST00000536843	DCTPP1	Q9H773	170 aa		18.81	■□□□□ 0.6
CHFR-213	ENST00000536843	ANKLE2	Q86XL3	938 aa		18.81	■□□□□ 0.6
CHFR-213	ENST00000536843	INTS4	Q96HW7	963 aa	Known RBP	18.8	■□□□□ 0.6
CHFR-213	ENST00000536843	USP31	Q70CQ4	1352 aa		18.8	■□□□□ 0.6
CHFR-213	ENST00000536843	SSH2	Q76I76	1423 aa		18.8	■□□□□ 0.6
CHFR-213	ENST00000536843	IGSF3	O75054	1194 aa		18.8	■□□□□ 0.6
CHFR-213	ENST00000536843	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.8	■□□□□ 0.6
CHFR-213	ENST00000536843	KDM4A	O75164	1064 aa		18.79	■□□□□ 0.6

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