RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SIK1P57059 783 aa17.99■□□□□ 0.47
RPAIN-205ENST00000536255 GAS2L2Q8NHY3 880 aa17.99■□□□□ 0.47
RPAIN-205ENST00000536255 TFCP2L1Q9NZI6 479 aa17.99■□□□□ 0.47
RPAIN-205ENST00000536255 SCN11AQ9UI33 1791 aa17.99■□□□□ 0.47
RPAIN-205ENST00000536255 ZBTB7AO95365 584 aa17.98■□□□□ 0.47
RPAIN-205ENST00000536255 WDR43Q15061 677 aaKnown RBP eCLIP17.98■□□□□ 0.47
RPAIN-205ENST00000536255 NFATC2IPQ8NCF5 419 aa17.98■□□□□ 0.47
RPAIN-205ENST00000536255 MRC1P22897 1456 aa17.98■□□□□ 0.47
RPAIN-205ENST00000536255 PNPLA7Q6ZV29 1317 aa17.98■□□□□ 0.47
RPAIN-205ENST00000536255 ADAMTS7Q9UKP4 1686 aa17.97■□□□□ 0.47
RPAIN-205ENST00000536255 MAP3K5Q99683 1374 aa17.97■□□□□ 0.47
RPAIN-205ENST00000536255 RNMTO43148 476 aaKnown RBP17.97■□□□□ 0.47
RPAIN-205ENST00000536255 PHACTR3Q96KR7 559 aa17.97■□□□□ 0.47
RPAIN-205ENST00000536255 LGR6Q9HBX8 967 aa17.97■□□□□ 0.47
RPAIN-205ENST00000536255 QSER1Q2KHR3 1735 aa17.97■□□□□ 0.47
RPAIN-205ENST00000536255 TAF1LQ8IZX4 1826 aa17.96■□□□□ 0.47
RPAIN-205ENST00000536255 MTFR1LQ9H019 292 aa17.96■□□□□ 0.47
RPAIN-205ENST00000536255 SLC52A2Q9HAB3 445 aa17.96■□□□□ 0.47
RPAIN-205ENST00000536255 TUBGCP6Q96RT7 1819 aa17.95■□□□□ 0.46
RPAIN-205ENST00000536255 C4BP0C0L5 1744 aa17.95■□□□□ 0.46
RPAIN-205ENST00000536255 GNAT3A8MTJ3 354 aa17.95■□□□□ 0.46
RPAIN-205ENST00000536255 ATP6V1AP38606 617 aa17.95■□□□□ 0.46
RPAIN-205ENST00000536255 ITPK1Q13572 414 aa17.94■□□□□ 0.46
RPAIN-205ENST00000536255 LINC00116Q8NCU8 138 aa17.94■□□□□ 0.46
RPAIN-205ENST00000536255 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
RPAIN-205ENST00000536255 ZNF831Q5JPB2 1677 aa17.93■□□□□ 0.46
RPAIN-205ENST00000536255 SLC16A10Q8TF71 515 aa17.93■□□□□ 0.46
RPAIN-205ENST00000536255 AK7Q96M32 723 aa17.93■□□□□ 0.46
RPAIN-205ENST00000536255 ATF5Q9Y2D1 282 aaPredicted RBP17.93■□□□□ 0.46
RPAIN-205ENST00000536255 PTGER2P43116 358 aa17.92■□□□□ 0.46
RPAIN-205ENST00000536255 SLC4A9Q96Q91 983 aa17.92■□□□□ 0.46
RPAIN-205ENST00000536255 MRS2Q9HD23 443 aa17.92■□□□□ 0.46
RPAIN-205ENST00000536255 PPP1R1BQ9UD71 204 aaPredicted RBP17.92■□□□□ 0.46
RPAIN-205ENST00000536255 MAPK8IP3Q9UPT6 1336 aa17.92■□□□□ 0.46
RPAIN-205ENST00000536255 PTCD1O75127 700 aaKnown RBP17.91■□□□□ 0.46
RPAIN-205ENST00000536255 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
RPAIN-205ENST00000536255 FLAD1Q8NFF5 587 aa17.91■□□□□ 0.46
RPAIN-205ENST00000536255 IL17REQ8NFR9 667 aa17.91■□□□□ 0.46
RPAIN-205ENST00000536255 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
RPAIN-205ENST00000536255 COL23A1Q86Y22 540 aaPredicted RBP17.9■□□□□ 0.46
RPAIN-205ENST00000536255 SGIP1Q9BQI5 828 aa17.9■□□□□ 0.46
RPAIN-205ENST00000536255 CEMIPQ8WUJ3 1361 aa17.9■□□□□ 0.46
RPAIN-205ENST00000536255 TEFQ10587 303 aa17.89■□□□□ 0.45
RPAIN-205ENST00000536255 PLEKHF1Q96S99 279 aa17.89■□□□□ 0.45
RPAIN-205ENST00000536255 SLC39A6Q13433 755 aa17.88■□□□□ 0.45
RPAIN-205ENST00000536255 AMIGO3Q86WK7 504 aa17.88■□□□□ 0.45
RPAIN-205ENST00000536255 ADAMTS8Q9UP79 889 aa17.88■□□□□ 0.45
RPAIN-205ENST00000536255 CICQ96RK0 1608 aaPredicted RBP17.87■□□□□ 0.45
RPAIN-205ENST00000536255 COL5A3P25940 1745 aaPredicted RBP17.87■□□□□ 0.45
RPAIN-205ENST00000536255 UBR3Q6ZT12 1888 aa17.87■□□□□ 0.45
RPAIN-205ENST00000536255 GNPATO15228 680 aa17.87■□□□□ 0.45
RPAIN-205ENST00000536255 PHF14O94880 888 aa17.87■□□□□ 0.45
RPAIN-205ENST00000536255 SSFA2P28290 1259 aa17.87■□□□□ 0.45
RPAIN-205ENST00000536255 RTF1Q92541 710 aaKnown RBP17.87■□□□□ 0.45
RPAIN-205ENST00000536255 CNTNAP4Q9C0A0 1308 aa17.87■□□□□ 0.45
RPAIN-205ENST00000536255 KCPQ6ZWJ8 1503 aa17.87■□□□□ 0.45
RPAIN-205ENST00000536255 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.86■□□□□ 0.45
RPAIN-205ENST00000536255 CCDC184Q52MB2 194 aa17.86■□□□□ 0.45
RPAIN-205ENST00000536255 RUNDC1Q96C34 613 aa17.86■□□□□ 0.45
RPAIN-205ENST00000536255 TJP1Q07157 1748 aa17.86■□□□□ 0.45
RPAIN-205ENST00000536255 HTATSF1O43719 755 aaKnown RBP17.85■□□□□ 0.45
RPAIN-205ENST00000536255 SIPA1L3O60292 1781 aaPredicted RBP17.85■□□□□ 0.45
RPAIN-205ENST00000536255 NFE2L2Q16236 605 aa17.85■□□□□ 0.45
RPAIN-205ENST00000536255 RC3H1Q5TC82 1133 aaKnown RBP17.85■□□□□ 0.45
RPAIN-205ENST00000536255 SMIM5Q71RC9 77 aa17.85■□□□□ 0.45
RPAIN-205ENST00000536255 COL24A1Q17RW2 1714 aa17.84■□□□□ 0.45
RPAIN-205ENST00000536255 POLD1P28340 1107 aa17.84■□□□□ 0.45
RPAIN-205ENST00000536255 MCM10Q7L590 875 aa17.84■□□□□ 0.45
RPAIN-205ENST00000536255 TTC5Q8N0Z6 440 aa17.84■□□□□ 0.45
RPAIN-205ENST00000536255 PNISRQ8TF01 805 aaKnown RBP17.84■□□□□ 0.45
RPAIN-205ENST00000536255 UBR2Q8IWV8 1755 aa17.84■□□□□ 0.45
RPAIN-205ENST00000536255 CRKLP46109 303 aaKnown RBP17.83■□□□□ 0.44
RPAIN-205ENST00000536255 ZNF790Q6PG37 636 aa17.83■□□□□ 0.44
RPAIN-205ENST00000536255 CCDC146Q8IYE0 955 aa17.83■□□□□ 0.44
RPAIN-205ENST00000536255 ARXQ96QS3 562 aa17.83■□□□□ 0.44
RPAIN-205ENST00000536255 RTCBQ9Y3I0 505 aaKnown RBP17.83■□□□□ 0.44
RPAIN-205ENST00000536255 CCER2I3L3R5 266 aa17.82■□□□□ 0.44
RPAIN-205ENST00000536255 MSL1Q68DK7 614 aa17.82■□□□□ 0.44
RPAIN-205ENST00000536255 VSIG10Q8N0Z9 540 aa17.82■□□□□ 0.44
RPAIN-205ENST00000536255 BTBD11A6QL63 1104 aa17.81■□□□□ 0.44
RPAIN-205ENST00000536255 RPS6KA4O75676 772 aa17.81■□□□□ 0.44
RPAIN-205ENST00000536255 ADRA2BP18089 450 aa17.81■□□□□ 0.44
RPAIN-205ENST00000536255 LMOD3Q0VAK6 560 aa17.81■□□□□ 0.44
RPAIN-205ENST00000536255 DCTN1Q14203 1278 aa17.81■□□□□ 0.44
RPAIN-205ENST00000536255 DNAJC10Q8IXB1 793 aa17.81■□□□□ 0.44
RPAIN-205ENST00000536255 TMPOP42166 694 aaKnown RBP17.8■□□□□ 0.44
RPAIN-205ENST00000536255 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
RPAIN-205ENST00000536255 ZNF496Q96IT1 587 aaPredicted RBP17.8■□□□□ 0.44
RPAIN-205ENST00000536255 FHDC1Q9C0D6 1143 aaPredicted RBP17.8■□□□□ 0.44
RPAIN-205ENST00000536255 CYP19A1P11511 503 aaPredicted RBP17.79■□□□□ 0.44
RPAIN-205ENST00000536255 RIPK4P57078 832 aa17.79■□□□□ 0.44
RPAIN-205ENST00000536255 INTS5Q6P9B9 1019 aaKnown RBP17.79■□□□□ 0.44
RPAIN-205ENST00000536255 CCDC87Q9NVE4 849 aa17.79■□□□□ 0.44
RPAIN-205ENST00000536255 MYH14Q7Z406 1995 aaKnown RBP17.79■□□□□ 0.44
RPAIN-205ENST00000536255 HEG1Q9ULI3 1381 aa17.79■□□□□ 0.44
RPAIN-205ENST00000536255 ARHGEF1Q92888 912 aaKnown RBP17.78■□□□□ 0.44
RPAIN-205ENST00000536255 FMNL2Q96PY5 1086 aa17.78■□□□□ 0.44
RPAIN-205ENST00000536255 DLG5Q8TDM6 1919 aa17.77■□□□□ 0.44
RPAIN-205ENST00000536255 FAM9BQ8IZU0 186 aa17.77■□□□□ 0.44
RPAIN-205ENST00000536255 SYT17Q9BSW7 474 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms