RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 C20orf194Q5TEA3 1177 aa7.46□□□□□ -1.22
VPS33A-203ENST00000536212 BLOC1S3Q6QNY0 202 aa7.46□□□□□ -1.22
VPS33A-203ENST00000536212 CRIPAKQ8N1N5 446 aa7.46□□□□□ -1.22
VPS33A-203ENST00000536212 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.46□□□□□ -1.22
VPS33A-203ENST00000536212 USP35Q9P2H5 1018 aa7.46□□□□□ -1.22
VPS33A-203ENST00000536212 FANCAO15360 1455 aa7.46□□□□□ -1.22
VPS33A-203ENST00000536212 POLR3AO14802 1390 aaPredicted RBP7.46□□□□□ -1.22
VPS33A-203ENST00000536212 KDM5AP29375 1690 aaKnown RBP7.45□□□□□ -1.22
VPS33A-203ENST00000536212 RBM46Q8TBY0 533 aaKnown RBP7.45□□□□□ -1.22
VPS33A-203ENST00000536212 PCMTD1Q96MG8 357 aaPredicted RBP7.45□□□□□ -1.22
VPS33A-203ENST00000536212 EFCAB6Q5THR3 1501 aa7.45□□□□□ -1.22
VPS33A-203ENST00000536212 SETBP1Q9Y6X0 1596 aa7.45□□□□□ -1.22
VPS33A-203ENST00000536212 ABCA6Q8N139 1617 aa7.45□□□□□ -1.22
VPS33A-203ENST00000536212 NKTRP30414 1462 aaKnown RBP7.44□□□□□ -1.22
VPS33A-203ENST00000536212 E9PSI1 815 aa7.44□□□□□ -1.22
VPS33A-203ENST00000536212 KIF3BO15066 747 aa7.44□□□□□ -1.22
VPS33A-203ENST00000536212 WIPF1O43516 503 aa7.44□□□□□ -1.22
VPS33A-203ENST00000536212 TLL1O43897 1013 aa7.44□□□□□ -1.22
VPS33A-203ENST00000536212 SH3D19Q5HYK7 790 aa7.44□□□□□ -1.22
VPS33A-203ENST00000536212 CFAP70Q5T0N1 1121 aa7.44□□□□□ -1.22
VPS33A-203ENST00000536212 NLRP7Q8WX94 980 aa7.44□□□□□ -1.22
VPS33A-203ENST00000536212 BEGAINQ9BUH8 593 aa7.44□□□□□ -1.22
VPS33A-203ENST00000536212 CARD14Q9BXL6 1004 aa7.44□□□□□ -1.22
VPS33A-203ENST00000536212 C1orf115Q9H7X2 142 aa7.44□□□□□ -1.22
VPS33A-203ENST00000536212 FAM217BQ9NTX9 383 aaPredicted RBP7.44□□□□□ -1.22
VPS33A-203ENST00000536212 ADGRF5Q8IZF2 1346 aa7.44□□□□□ -1.22
VPS33A-203ENST00000536212 IFT172Q9UG01 1749 aa7.44□□□□□ -1.22
VPS33A-203ENST00000536212 ADGRL1O94910 1474 aa7.43□□□□□ -1.22
VPS33A-203ENST00000536212 ADGRB3O60242 1522 aa7.43□□□□□ -1.22
VPS33A-203ENST00000536212 PPEF1O14829 653 aaPredicted RBP7.43□□□□□ -1.22
VPS33A-203ENST00000536212 PPM1GO15355 546 aaPredicted RBP7.43□□□□□ -1.22
VPS33A-203ENST00000536212 S1PR4O95977 384 aa7.43□□□□□ -1.22
VPS33A-203ENST00000536212 RTL5Q5HYW3 569 aaPredicted RBP7.43□□□□□ -1.22
VPS33A-203ENST00000536212 PUS7Q96PZ0 661 aaKnown RBP7.43□□□□□ -1.22
VPS33A-203ENST00000536212 NINLQ9Y2I6 1382 aa7.43□□□□□ -1.22
VPS33A-203ENST00000536212 ZBTB7CA1YPR0 619 aa7.42□□□□□ -1.22
VPS33A-203ENST00000536212 APAF1O14727 1248 aa7.42□□□□□ -1.22
VPS33A-203ENST00000536212 PDE3AQ14432 1141 aa7.42□□□□□ -1.22
VPS33A-203ENST00000536212 UBE2Q2Q8WVN8 375 aa7.42□□□□□ -1.22
VPS33A-203ENST00000536212 EYA1Q99502 592 aa7.42□□□□□ -1.22
VPS33A-203ENST00000536212 CCDC9Q9Y3X0 531 aaKnown RBP7.42□□□□□ -1.22
VPS33A-203ENST00000536212 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.41□□□□□ -1.22
VPS33A-203ENST00000536212 PDIA4P13667 645 aaKnown RBP7.41□□□□□ -1.22
VPS33A-203ENST00000536212 INSM1Q01101 510 aaPredicted RBP7.41□□□□□ -1.22
VPS33A-203ENST00000536212 NFX1Q12986 1120 aaKnown RBP7.41□□□□□ -1.22
VPS33A-203ENST00000536212 SKIV2LQ15477 1246 aaKnown RBP7.41□□□□□ -1.22
VPS33A-203ENST00000536212 C8orf34Q49A92 452 aa7.41□□□□□ -1.22
VPS33A-203ENST00000536212 C14orf93Q9H972 538 aaKnown RBP7.41□□□□□ -1.22
VPS33A-203ENST00000536212 RPGRIP1LQ68CZ1 1315 aa7.41□□□□□ -1.22
VPS33A-203ENST00000536212 UGGT1Q9NYU2 1555 aa7.41□□□□□ -1.22
VPS33A-203ENST00000536212 PPRC1Q5VV67 1664 aaKnown RBP7.41□□□□□ -1.22
VPS33A-203ENST00000536212 APBB1O00213 710 aa7.4□□□□□ -1.22
VPS33A-203ENST00000536212 AVPP01185 164 aa7.4□□□□□ -1.22
VPS33A-203ENST00000536212 FLIIQ13045 1269 aa7.4□□□□□ -1.22
VPS33A-203ENST00000536212 AAMPQ13685 434 aa7.4□□□□□ -1.22
VPS33A-203ENST00000536212 CCDC146Q8IYE0 955 aa7.4□□□□□ -1.22
VPS33A-203ENST00000536212 CGNL1Q0VF96 1302 aa7.4□□□□□ -1.22
VPS33A-203ENST00000536212 CENPJQ9HC77 1338 aaPredicted RBP7.4□□□□□ -1.22
VPS33A-203ENST00000536212 ASXL2Q76L83 1435 aa7.4□□□□□ -1.22
VPS33A-203ENST00000536212 IQSEC2Q5JU85 1478 aa7.4□□□□□ -1.22
VPS33A-203ENST00000536212 MLH3Q9UHC1 1453 aa7.4□□□□□ -1.22
VPS33A-203ENST00000536212 ADGRB1O14514 1584 aa7.4□□□□□ -1.22
VPS33A-203ENST00000536212 USP32Q8NFA0 1604 aa7.4□□□□□ -1.22
VPS33A-203ENST00000536212 KIDINS220Q9ULH0 1771 aa7.4□□□□□ -1.23
VPS33A-203ENST00000536212 MROH2AA6NES4 1674 aa7.39□□□□□ -1.23
VPS33A-203ENST00000536212 ZNF518AQ6AHZ1 1483 aa7.39□□□□□ -1.23
VPS33A-203ENST00000536212 NOS1P29475 1434 aa7.39□□□□□ -1.23
VPS33A-203ENST00000536212 RCCD1A6NED2 376 aa7.39□□□□□ -1.23
VPS33A-203ENST00000536212 SKAP1Q86WV1 359 aa7.39□□□□□ -1.23
VPS33A-203ENST00000536212 WWC1Q8IX03 1113 aa7.39□□□□□ -1.23
VPS33A-203ENST00000536212 PKD2L1Q9P0L9 805 aa7.39□□□□□ -1.23
VPS33A-203ENST00000536212 KIF1BO60333 1816 aa7.38□□□□□ -1.23
VPS33A-203ENST00000536212 NPATQ14207 1427 aa7.38□□□□□ -1.23
VPS33A-203ENST00000536212 NSD3Q9BZ95 1437 aa7.38□□□□□ -1.23
VPS33A-203ENST00000536212 ZMYM3Q14202 1370 aa7.38□□□□□ -1.23
VPS33A-203ENST00000536212 ACTN4O43707 911 aaKnown RBP7.38□□□□□ -1.23
VPS33A-203ENST00000536212 ADH1BP00325 375 aa7.38□□□□□ -1.23
VPS33A-203ENST00000536212 CCDC27Q2M243 656 aa7.38□□□□□ -1.23
VPS33A-203ENST00000536212 PLA2G2CQ5R387 149 aa7.38□□□□□ -1.23
VPS33A-203ENST00000536212 WDR63Q8IWG1 891 aa7.38□□□□□ -1.23
VPS33A-203ENST00000536212 RUNDC1Q96C34 613 aa7.38□□□□□ -1.23
VPS33A-203ENST00000536212 DACH1Q9UI36 760 aa7.38□□□□□ -1.23
VPS33A-203ENST00000536212 FRMPD1Q5SYB0 1578 aa7.37□□□□□ -1.23
VPS33A-203ENST00000536212 NSD2O96028 1365 aa7.37□□□□□ -1.23
VPS33A-203ENST00000536212 BCAR3O75815 825 aa7.37□□□□□ -1.23
VPS33A-203ENST00000536212 NEFMP07197 916 aa7.37□□□□□ -1.23
VPS33A-203ENST00000536212 DIXDC1Q155Q3 683 aa7.37□□□□□ -1.23
VPS33A-203ENST00000536212 GMPR2Q9P2T1 348 aaKnown RBP7.37□□□□□ -1.23
VPS33A-203ENST00000536212 SHPRHQ149N8 1683 aa7.37□□□□□ -1.23
VPS33A-203ENST00000536212 ZC3H13Q5T200 1668 aaKnown RBP7.37□□□□□ -1.23
VPS33A-203ENST00000536212 POGZQ7Z3K3 1410 aa7.36□□□□□ -1.23
VPS33A-203ENST00000536212 PPLO60437 1756 aa7.36□□□□□ -1.23
VPS33A-203ENST00000536212 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
VPS33A-203ENST00000536212 IGHDP01880 384 aa7.36□□□□□ -1.23
VPS33A-203ENST00000536212 DNAJB2P25686 324 aa7.36□□□□□ -1.23
VPS33A-203ENST00000536212 CTC1Q2NKJ3 1217 aa7.36□□□□□ -1.23
VPS33A-203ENST00000536212 MYSM1Q5VVJ2 828 aa7.36□□□□□ -1.23
VPS33A-203ENST00000536212 MORC1Q86VD1 984 aa7.36□□□□□ -1.23
VPS33A-203ENST00000536212 SULF1Q8IWU6 871 aa7.36□□□□□ -1.23
VPS33A-203ENST00000536212 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms