RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 POGZQ7Z3K3 1410 aa8.38□□□□□ -1.07
CPSF7-215ENST00000536145 MSH6P52701 1360 aa8.38□□□□□ -1.07
CPSF7-215ENST00000536145 WDR33Q9C0J8 1336 aaKnown RBP8.38□□□□□ -1.07
CPSF7-215ENST00000536145 RIOK3O14730 519 aaKnown RBP8.38□□□□□ -1.07
CPSF7-215ENST00000536145 CHGAP10645 457 aaKnown RBP8.38□□□□□ -1.07
CPSF7-215ENST00000536145 LMOD3Q0VAK6 560 aa8.38□□□□□ -1.07
CPSF7-215ENST00000536145 KRT24Q2M2I5 525 aa8.38□□□□□ -1.07
CPSF7-215ENST00000536145 FEZ1Q99689 392 aa8.38□□□□□ -1.07
CPSF7-215ENST00000536145 DIAPH3Q9NSV4 1193 aa8.38□□□□□ -1.07
CPSF7-215ENST00000536145 STAP2Q9UGK3 403 aa8.38□□□□□ -1.07
CPSF7-215ENST00000536145 PREX1Q8TCU6 1659 aa8.37□□□□□ -1.07
CPSF7-215ENST00000536145 PTPRCP08575 1304 aa8.37□□□□□ -1.07
CPSF7-215ENST00000536145 CHMLP26374 656 aa8.37□□□□□ -1.07
CPSF7-215ENST00000536145 FGD1P98174 961 aa8.37□□□□□ -1.07
CPSF7-215ENST00000536145 FOXD4L5Q5VV16 416 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-215ENST00000536145 HDGFL2Q7Z4V5 671 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-215ENST00000536145 PDCL2Q8N4E4 241 aa8.37□□□□□ -1.07
CPSF7-215ENST00000536145 FOXD4L4Q8WXT5 416 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-215ENST00000536145 TTC14Q96N46 770 aa8.37□□□□□ -1.07
CPSF7-215ENST00000536145 MEIS3Q99687 375 aa8.37□□□□□ -1.07
CPSF7-215ENST00000536145 SRCIN1Q9C0H9 1055 aa8.37□□□□□ -1.07
CPSF7-215ENST00000536145 FAM53CQ9NYF3 392 aa8.37□□□□□ -1.07
CPSF7-215ENST00000536145 TMEM131LA2VDJ0 1609 aa8.36□□□□□ -1.07
CPSF7-215ENST00000536145 AOX1Q06278 1338 aa8.36□□□□□ -1.07
CPSF7-215ENST00000536145 ELL2O00472 640 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-215ENST00000536145 CHL1O00533 1208 aa8.36□□□□□ -1.07
CPSF7-215ENST00000536145 HCLS1P14317 486 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-215ENST00000536145 ADRA2BP18089 450 aa8.36□□□□□ -1.07
CPSF7-215ENST00000536145 UBE2HP62256 183 aa8.36□□□□□ -1.07
CPSF7-215ENST00000536145 SRPK2P78362 688 aaKnown RBP8.36□□□□□ -1.07
CPSF7-215ENST00000536145 GABPB1Q06547 395 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-215ENST00000536145 ARID3AQ99856 593 aa8.36□□□□□ -1.07
CPSF7-215ENST00000536145 GDPD2Q9HCC8 539 aa8.36□□□□□ -1.07
CPSF7-215ENST00000536145 OGFRQ9NZT2 677 aa8.36□□□□□ -1.07
CPSF7-215ENST00000536145 MAP2P11137 1827 aaKnown RBP8.36□□□□□ -1.07
CPSF7-215ENST00000536145 CRYBG1Q9Y4K1 1723 aa8.35□□□□□ -1.07
CPSF7-215ENST00000536145 FAM177BA6PVY3 158 aa8.35□□□□□ -1.07
CPSF7-215ENST00000536145 HMOX1P09601 288 aa8.35□□□□□ -1.07
CPSF7-215ENST00000536145 ZSCAN22P10073 491 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-215ENST00000536145 KCNA4P22459 653 aa8.35□□□□□ -1.07
CPSF7-215ENST00000536145 U2AF2P26368 475 aaKnown RBP eCLIP8.35□□□□□ -1.079e-9■■■□□ 15
CPSF7-215ENST00000536145 HSPA4P34932 840 aa8.35□□□□□ -1.07
CPSF7-215ENST00000536145 NCBP1Q09161 790 aaKnown RBP8.35□□□□□ -1.07
CPSF7-215ENST00000536145 DNTTIP2Q5QJE6 756 aaKnown RBP8.35□□□□□ -1.07
CPSF7-215ENST00000536145 CTNNA3Q9UI47 895 aa8.35□□□□□ -1.07
CPSF7-215ENST00000536145 CNPY2Q9Y2B0 182 aa8.35□□□□□ -1.07
CPSF7-215ENST00000536145 MORC2Q9Y6X9 1032 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-215ENST00000536145 ALKQ9UM73 1620 aa8.35□□□□□ -1.07
CPSF7-215ENST00000536145 CRB1P82279 1406 aa8.35□□□□□ -1.07
CPSF7-215ENST00000536145 N4BP2Q86UW6 1770 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-215ENST00000536145 SLFN14P0C7P3 912 aa8.34□□□□□ -1.07
CPSF7-215ENST00000536145 MCCP23508 829 aa8.34□□□□□ -1.07
CPSF7-215ENST00000536145 GTF2E1P29083 439 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-215ENST00000536145 TAF3Q5VWG9 929 aa8.34□□□□□ -1.07
CPSF7-215ENST00000536145 MPNDQ8N594 471 aa8.34□□□□□ -1.07
CPSF7-215ENST00000536145 CDK19Q9BWU1 502 aa8.34□□□□□ -1.07
CPSF7-215ENST00000536145 TMEM51Q9NW97 253 aa8.34□□□□□ -1.07
CPSF7-215ENST00000536145 DDX41Q9UJV9 622 aaKnown RBP8.34□□□□□ -1.07
CPSF7-215ENST00000536145 EDC4Q6P2E9 1401 aaKnown RBP8.34□□□□□ -1.07
CPSF7-215ENST00000536145 RGPD1P0DJD0 1748 aa8.34□□□□□ -1.07
CPSF7-215ENST00000536145 MINK1Q8N4C8 1332 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-215ENST00000536145 A0A0U1RQG5 324 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-215ENST00000536145 FAM83GA6ND36 823 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 SMTNL1A8MU46 457 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 SETD1AO15047 1707 aaKnown RBP8.33□□□□□ -1.08
CPSF7-215ENST00000536145 HMMRO75330 724 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 F13A1P00488 732 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 FBLN1P23142 703 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 MON2Q7Z3U7 1717 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 KCNB2Q92953 911 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 PRAM1Q96QH2 718 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 IL25Q9H293 177 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 CABP1Q9NZU7 370 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 EMILIN1Q9Y6C2 1016 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 CPS1P31327 1500 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 ARHGEF10O15013 1369 aa8.33□□□□□ -1.08
CPSF7-215ENST00000536145 XRN1Q8IZH2 1706 aaKnown RBP8.32□□□□□ -1.08
CPSF7-215ENST00000536145 MYO5BQ9ULV0 1848 aa8.32□□□□□ -1.08
CPSF7-215ENST00000536145 SPDYE4A6NLX3 237 aa8.32□□□□□ -1.08
CPSF7-215ENST00000536145 HAP1P54257 671 aaPredicted RBP8.32□□□□□ -1.08
CPSF7-215ENST00000536145 ATP8B2P98198 1209 aa8.32□□□□□ -1.08
CPSF7-215ENST00000536145 RBM43Q6ZSC3 357 aaKnown RBP8.32□□□□□ -1.08
CPSF7-215ENST00000536145 MTMR6Q9Y217 621 aa8.32□□□□□ -1.08
CPSF7-215ENST00000536145 C3P01024 1663 aa8.31□□□□□ -1.08
CPSF7-215ENST00000536145 SYT1P21579 422 aa8.31□□□□□ -1.08
CPSF7-215ENST00000536145 CCT4P50991 539 aaKnown RBP8.31□□□□□ -1.08
CPSF7-215ENST00000536145 ST3GAL1Q11201 340 aa8.31□□□□□ -1.08
CPSF7-215ENST00000536145 IDI1Q13907 227 aa8.31□□□□□ -1.08
CPSF7-215ENST00000536145 SAFB2Q14151 953 aaKnown RBP eCLIP8.31□□□□□ -1.08
CPSF7-215ENST00000536145 DCTN1Q14203 1278 aa8.31□□□□□ -1.08
CPSF7-215ENST00000536145 GIMAP6Q6P9H5 292 aa8.31□□□□□ -1.08
CPSF7-215ENST00000536145 RUFY3Q7L099 469 aa8.31□□□□□ -1.08
CPSF7-215ENST00000536145 UNC5CLQ8IV45 518 aa8.31□□□□□ -1.08
CPSF7-215ENST00000536145 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.31□□□□□ -1.08
CPSF7-215ENST00000536145 LSG1Q9H089 658 aaKnown RBP8.31□□□□□ -1.08
CPSF7-215ENST00000536145 SNX14Q9Y5W7 946 aa8.31□□□□□ -1.08
CPSF7-215ENST00000536145 ITSN1Q15811 1721 aa8.31□□□□□ -1.08
CPSF7-215ENST00000536145 DIP2CQ9Y2E4 1556 aa8.31□□□□□ -1.08
CPSF7-215ENST00000536145 ERBB3P21860 1342 aa8.3□□□□□ -1.08
CPSF7-215ENST00000536145 RAD50Q92878 1312 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms