RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 SLC52A2Q9HAB3 445 aa16.97■□□□□ 0.31
VPS37C-203ENST00000536000 ZBTB7AO95365 584 aa16.96■□□□□ 0.31
VPS37C-203ENST00000536000 PNNQ9H307 717 aaKnown RBP16.96■□□□□ 0.31
VPS37C-203ENST00000536000 ATF5Q9Y2D1 282 aaPredicted RBP16.96■□□□□ 0.31
VPS37C-203ENST00000536000 PRKRIP1Q9H875 184 aaPredicted RBP16.95■□□□□ 0.3
VPS37C-203ENST00000536000 MSH5O43196 834 aa16.94■□□□□ 0.3
VPS37C-203ENST00000536000 IL17REQ8NFR9 667 aa16.94■□□□□ 0.3
VPS37C-203ENST00000536000 SLC16A10Q8TF71 515 aa16.94■□□□□ 0.3
VPS37C-203ENST00000536000 PTCD1O75127 700 aaKnown RBP16.93■□□□□ 0.3
VPS37C-203ENST00000536000 TEFQ10587 303 aa16.93■□□□□ 0.3
VPS37C-203ENST00000536000 FLAD1Q8NFF5 587 aa16.93■□□□□ 0.3
VPS37C-203ENST00000536000 AK7Q96M32 723 aa16.93■□□□□ 0.3
VPS37C-203ENST00000536000 MTFR1LQ9H019 292 aa16.93■□□□□ 0.3
VPS37C-203ENST00000536000 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
VPS37C-203ENST00000536000 PNPLA7Q6ZV29 1317 aa16.93■□□□□ 0.3
VPS37C-203ENST00000536000 PAPPAQ13219 1627 aa16.92■□□□□ 0.3
VPS37C-203ENST00000536000 MAP3K5Q99683 1374 aa16.92■□□□□ 0.3
VPS37C-203ENST00000536000 ITPK1Q13572 414 aa16.92■□□□□ 0.3
VPS37C-203ENST00000536000 LINC00116Q8NCU8 138 aa16.92■□□□□ 0.3
VPS37C-203ENST00000536000 RTF1Q92541 710 aaKnown RBP16.92■□□□□ 0.3
VPS37C-203ENST00000536000 SLC39A6Q13433 755 aa16.91■□□□□ 0.3
VPS37C-203ENST00000536000 COL23A1Q86Y22 540 aaPredicted RBP16.91■□□□□ 0.3
VPS37C-203ENST00000536000 SLC4A9Q96Q91 983 aa16.91■□□□□ 0.3
VPS37C-203ENST00000536000 SCN11AQ9UI33 1791 aa16.91■□□□□ 0.3
VPS37C-203ENST00000536000 LRP5O75197 1615 aa16.89■□□□□ 0.29
VPS37C-203ENST00000536000 HTATSF1O43719 755 aaKnown RBP16.89■□□□□ 0.29
VPS37C-203ENST00000536000 PLEKHF1Q96S99 279 aa16.89■□□□□ 0.29
VPS37C-203ENST00000536000 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
VPS37C-203ENST00000536000 RC3H1Q5TC82 1133 aaKnown RBP16.88■□□□□ 0.29
VPS37C-203ENST00000536000 TTC5Q8N0Z6 440 aa16.88■□□□□ 0.29
VPS37C-203ENST00000536000 MAPK8IP3Q9UPT6 1336 aa16.88■□□□□ 0.29
VPS37C-203ENST00000536000 CASZ1Q86V15 1759 aa16.87■□□□□ 0.29
VPS37C-203ENST00000536000 TAF1LQ8IZX4 1826 aa16.87■□□□□ 0.29
VPS37C-203ENST00000536000 GNPATO15228 680 aa16.87■□□□□ 0.29
VPS37C-203ENST00000536000 PTGER2P43116 358 aa16.87■□□□□ 0.29
VPS37C-203ENST00000536000 MCM10Q7L590 875 aa16.87■□□□□ 0.29
VPS37C-203ENST00000536000 C5P01031 1676 aa16.86■□□□□ 0.29
VPS37C-203ENST00000536000 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.86■□□□□ 0.29
VPS37C-203ENST00000536000 PHF14O94880 888 aa16.86■□□□□ 0.29
VPS37C-203ENST00000536000 SSFA2P28290 1259 aa16.86■□□□□ 0.29
VPS37C-203ENST00000536000 POLD1P28340 1107 aa16.86■□□□□ 0.29
VPS37C-203ENST00000536000 RTCBQ9Y3I0 505 aaKnown RBP16.86■□□□□ 0.29
VPS37C-203ENST00000536000 BTBD11A6QL63 1104 aa16.85■□□□□ 0.29
VPS37C-203ENST00000536000 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
VPS37C-203ENST00000536000 NFE2L2Q16236 605 aa16.85■□□□□ 0.29
VPS37C-203ENST00000536000 TRAPPC3LQ5T215 181 aa16.85■□□□□ 0.29
VPS37C-203ENST00000536000 SMIM5Q71RC9 77 aa16.85■□□□□ 0.29
VPS37C-203ENST00000536000 C4BP0C0L5 1744 aa16.84■□□□□ 0.29
VPS37C-203ENST00000536000 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
VPS37C-203ENST00000536000 ANP32CO43423 234 aa16.84■□□□□ 0.29
VPS37C-203ENST00000536000 RPS6KA4O75676 772 aa16.84■□□□□ 0.29
VPS37C-203ENST00000536000 ZNF790Q6PG37 636 aa16.84■□□□□ 0.29
VPS37C-203ENST00000536000 DNAJC10Q8IXB1 793 aa16.84■□□□□ 0.29
VPS37C-203ENST00000536000 ARXQ96QS3 562 aa16.84■□□□□ 0.29
VPS37C-203ENST00000536000 SGIP1Q9BQI5 828 aa16.84■□□□□ 0.29
VPS37C-203ENST00000536000 CNTNAP4Q9C0A0 1308 aa16.84■□□□□ 0.29
VPS37C-203ENST00000536000 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
VPS37C-203ENST00000536000 MRC1P22897 1456 aa16.83■□□□□ 0.28
VPS37C-203ENST00000536000 CRKLP46109 303 aaKnown RBP16.83■□□□□ 0.28
VPS37C-203ENST00000536000 QSER1Q2KHR3 1735 aa16.83■□□□□ 0.28
VPS37C-203ENST00000536000 AMIGO3Q86WK7 504 aa16.83■□□□□ 0.28
VPS37C-203ENST00000536000 VSIG10Q8N0Z9 540 aa16.83■□□□□ 0.28
VPS37C-203ENST00000536000 ADAMTS8Q9UP79 889 aa16.83■□□□□ 0.28
VPS37C-203ENST00000536000 ADAMTS7Q9UKP4 1686 aa16.82■□□□□ 0.28
VPS37C-203ENST00000536000 RIPK4P57078 832 aa16.82■□□□□ 0.28
VPS37C-203ENST00000536000 TAF7Q15545 349 aaPredicted RBP16.82■□□□□ 0.28
VPS37C-203ENST00000536000 ADRA2BP18089 450 aa16.81■□□□□ 0.28
VPS37C-203ENST00000536000 MSL1Q68DK7 614 aa16.81■□□□□ 0.28
VPS37C-203ENST00000536000 CCDC146Q8IYE0 955 aa16.81■□□□□ 0.28
VPS37C-203ENST00000536000 RUNDC1Q96C34 613 aa16.81■□□□□ 0.28
VPS37C-203ENST00000536000 ZNF496Q96IT1 587 aaPredicted RBP16.81■□□□□ 0.28
VPS37C-203ENST00000536000 FMNL2Q96PY5 1086 aa16.81■□□□□ 0.28
VPS37C-203ENST00000536000 TEX13AQ9BXU3 409 aaPredicted RBP16.81■□□□□ 0.28
VPS37C-203ENST00000536000 TUBGCP6Q96RT7 1819 aa16.81■□□□□ 0.28
VPS37C-203ENST00000536000 KCNQ3O43525 872 aa16.8■□□□□ 0.28
VPS37C-203ENST00000536000 CYP19A1P11511 503 aaPredicted RBP16.8■□□□□ 0.28
VPS37C-203ENST00000536000 RFC4P35249 363 aa16.8■□□□□ 0.28
VPS37C-203ENST00000536000 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
VPS37C-203ENST00000536000 ARHGEF1Q92888 912 aaKnown RBP16.8■□□□□ 0.28
VPS37C-203ENST00000536000 CCDC87Q9NVE4 849 aa16.8■□□□□ 0.28
VPS37C-203ENST00000536000 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
VPS37C-203ENST00000536000 STARD3NLO95772 234 aa16.79■□□□□ 0.28
VPS37C-203ENST00000536000 INTS5Q6P9B9 1019 aaKnown RBP16.79■□□□□ 0.28
VPS37C-203ENST00000536000 UBR3Q6ZT12 1888 aa16.78■□□□□ 0.28
VPS37C-203ENST00000536000 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
VPS37C-203ENST00000536000 PNISRQ8TF01 805 aaKnown RBP16.78■□□□□ 0.28
VPS37C-203ENST00000536000 FHDC1Q9C0D6 1143 aaPredicted RBP16.78■□□□□ 0.28
VPS37C-203ENST00000536000 HEG1Q9ULI3 1381 aa16.77■□□□□ 0.28
VPS37C-203ENST00000536000 MYH14Q7Z406 1995 aaKnown RBP16.77■□□□□ 0.28
VPS37C-203ENST00000536000 LMOD3Q0VAK6 560 aa16.77■□□□□ 0.28
VPS37C-203ENST00000536000 KLHL34Q8N239 644 aa16.77■□□□□ 0.28
VPS37C-203ENST00000536000 SYT17Q9BSW7 474 aa16.77■□□□□ 0.28
VPS37C-203ENST00000536000 THUMPD2Q9BTF0 503 aaKnown RBP16.77■□□□□ 0.28
VPS37C-203ENST00000536000 MIS18AQ9NYP9 233 aa16.77■□□□□ 0.28
VPS37C-203ENST00000536000 RRP7AQ9Y3A4 280 aaKnown RBP16.77■□□□□ 0.28
VPS37C-203ENST00000536000 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
VPS37C-203ENST00000536000 CCDC184Q52MB2 194 aa16.76■□□□□ 0.27
VPS37C-203ENST00000536000 NLGN1Q8N2Q7 840 aa16.76■□□□□ 0.27
VPS37C-203ENST00000536000 KCPQ6ZWJ8 1503 aa16.75■□□□□ 0.27
VPS37C-203ENST00000536000 SNRPA1P09661 255 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms