RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 FOXO3O43524 673 aa5.71□□□□□ -1.5
SNHG1-202ENST00000535689 PTGIRP43119 386 aa5.71□□□□□ -1.5
SNHG1-202ENST00000535689 CLDN10P78369 228 aa5.71□□□□□ -1.5
SNHG1-202ENST00000535689 HIF1AQ16665 826 aa5.71□□□□□ -1.5
SNHG1-202ENST00000535689 Q6ZVU0 165 aa5.71□□□□□ -1.5
SNHG1-202ENST00000535689 AEBP1Q8IUX7 1158 aa5.71□□□□□ -1.5
SNHG1-202ENST00000535689 C1orf216Q8TAB5 229 aa5.71□□□□□ -1.5
SNHG1-202ENST00000535689 HPS1Q92902 700 aa5.71□□□□□ -1.5
SNHG1-202ENST00000535689 ESYT1Q9BSJ8 1104 aa5.71□□□□□ -1.5
SNHG1-202ENST00000535689 OSBPL3Q9H4L5 887 aa5.71□□□□□ -1.5
SNHG1-202ENST00000535689 AAASQ9NRG9 546 aa5.71□□□□□ -1.5
SNHG1-202ENST00000535689 IGFBP4P22692 258 aa5.7□□□□□ -1.5
SNHG1-202ENST00000535689 CLN3Q13286 438 aa5.7□□□□□ -1.5
SNHG1-202ENST00000535689 GNASQ5JWF2 1037 aa5.7□□□□□ -1.5
SNHG1-202ENST00000535689 TMEM164Q5U3C3 297 aa5.7□□□□□ -1.5
SNHG1-202ENST00000535689 XAGE2Q96GT9 111 aa5.7□□□□□ -1.5
SNHG1-202ENST00000535689 SLC4A9Q96Q91 983 aa5.7□□□□□ -1.5
SNHG1-202ENST00000535689 TMPRSS4Q9NRS4 437 aa5.7□□□□□ -1.5
SNHG1-202ENST00000535689 LILRA1O75019 489 aa5.69□□□□□ -1.5
SNHG1-202ENST00000535689 ATP2B4P23634 1241 aa5.69□□□□□ -1.5
SNHG1-202ENST00000535689 SMTNP53814 917 aa5.69□□□□□ -1.5
SNHG1-202ENST00000535689 TSGA10IPQ3SY00 556 aa5.69□□□□□ -1.5
SNHG1-202ENST00000535689 STAG2Q8N3U4 1231 aa5.69□□□□□ -1.5
SNHG1-202ENST00000535689 CNKSR1Q969H4 720 aa5.69□□□□□ -1.5
SNHG1-202ENST00000535689 COL26A1Q96A83 441 aa5.69□□□□□ -1.5
SNHG1-202ENST00000535689 A6NJY4 79 aa5.68□□□□□ -1.5
SNHG1-202ENST00000535689 TMEM88BA6NKF7 163 aa5.68□□□□□ -1.5
SNHG1-202ENST00000535689 CDK2AP1O14519 115 aa5.68□□□□□ -1.5
SNHG1-202ENST00000535689 NR3C2P08235 984 aa5.68□□□□□ -1.5
SNHG1-202ENST00000535689 TIMP2P16035 220 aa5.68□□□□□ -1.5
SNHG1-202ENST00000535689 SMCPP49901 116 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-202ENST00000535689 PSMA6P60900 246 aaKnown RBP5.68□□□□□ -1.5
SNHG1-202ENST00000535689 SLC27A3Q5K4L6 730 aa5.68□□□□□ -1.5
SNHG1-202ENST00000535689 ZNF787Q6DD87 383 aa5.68□□□□□ -1.5
SNHG1-202ENST00000535689 TMEM214Q6NUQ4 689 aaKnown RBP5.68□□□□□ -1.5
SNHG1-202ENST00000535689 MEIOBQ8N635 442 aa5.68□□□□□ -1.5
SNHG1-202ENST00000535689 ITPKCQ96DU7 683 aa5.68□□□□□ -1.5
SNHG1-202ENST00000535689 ZSCAN10Q96SZ4 725 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-202ENST00000535689 ZNF358Q9NW07 568 aa5.68□□□□□ -1.5
SNHG1-202ENST00000535689 MEN1O00255 615 aa5.67□□□□□ -1.5
SNHG1-202ENST00000535689 AVPP01185 164 aa5.67□□□□□ -1.5
SNHG1-202ENST00000535689 TLR1Q15399 786 aa5.67□□□□□ -1.5
SNHG1-202ENST00000535689 WDR44Q5JSH3 913 aa5.67□□□□□ -1.5
SNHG1-202ENST00000535689 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.67□□□□□ -1.5
SNHG1-202ENST00000535689 NIFKQ9BYG3 293 aaKnown RBP5.67□□□□□ -1.5
SNHG1-202ENST00000535689 BCL11AQ9H165 835 aa5.67□□□□□ -1.5
SNHG1-202ENST00000535689 ZMIZ1Q9ULJ6 1067 aa5.67□□□□□ -1.5
SNHG1-202ENST00000535689 A0A1W2PRU2 124 aa5.66□□□□□ -1.5
SNHG1-202ENST00000535689 SFI1A8K8P3 1242 aa5.66□□□□□ -1.5
SNHG1-202ENST00000535689 AXIN1O15169 862 aa5.66□□□□□ -1.5
SNHG1-202ENST00000535689 BMP2P12643 396 aa5.66□□□□□ -1.5
SNHG1-202ENST00000535689 SSFA2P28290 1259 aa5.66□□□□□ -1.5
SNHG1-202ENST00000535689 SCTRP47872 440 aa5.66□□□□□ -1.5
SNHG1-202ENST00000535689 MTFR1Q15390 333 aa5.66□□□□□ -1.5
SNHG1-202ENST00000535689 STK32AQ8WU08 396 aa5.66□□□□□ -1.5
SNHG1-202ENST00000535689 KIFC2Q96AC6 838 aa5.66□□□□□ -1.5
SNHG1-202ENST00000535689 SENP2Q9HC62 589 aa5.66□□□□□ -1.5
SNHG1-202ENST00000535689 ARHGEF10LQ9HCE6 1279 aa5.66□□□□□ -1.5
SNHG1-202ENST00000535689 GMPR2Q9P2T1 348 aaKnown RBP5.66□□□□□ -1.5
SNHG1-202ENST00000535689 GNEQ9Y223 722 aaKnown RBP5.66□□□□□ -1.5
SNHG1-202ENST00000535689 CCDC9Q9Y3X0 531 aaKnown RBP5.66□□□□□ -1.5
SNHG1-202ENST00000535689 GPC6Q9Y625 555 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-202ENST00000535689 ATAD2Q6PL18 1390 aa5.66□□□□□ -1.5
SNHG1-202ENST00000535689 ZCCHC6Q5VYS8 1495 aaKnown RBP5.65□□□□□ -1.5
SNHG1-202ENST00000535689 TMEM229AB2RXF0 380 aa5.65□□□□□ -1.5
SNHG1-202ENST00000535689 PPP1R12BO60237 982 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-202ENST00000535689 BMP1P13497 986 aa5.65□□□□□ -1.5
SNHG1-202ENST00000535689 ADD1P35611 737 aaKnown RBP5.65□□□□□ -1.5
SNHG1-202ENST00000535689 RNF144AP50876 292 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-202ENST00000535689 RELBQ01201 579 aa5.65□□□□□ -1.5
SNHG1-202ENST00000535689 CENPCQ03188 943 aa5.65□□□□□ -1.5
SNHG1-202ENST00000535689 SF3B2Q13435 895 aaKnown RBP5.65□□□□□ -1.5
SNHG1-202ENST00000535689 NBPF1Q3BBV0 1214 aa5.65□□□□□ -1.5
SNHG1-202ENST00000535689 LINC00528Q8N1L1 170 aa5.65□□□□□ -1.5
SNHG1-202ENST00000535689 RHBDD1Q8TEB9 315 aa5.65□□□□□ -1.5
SNHG1-202ENST00000535689 KLF16Q9BXK1 252 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-202ENST00000535689 ETNK1Q9HBU6 452 aa5.65□□□□□ -1.5
SNHG1-202ENST00000535689 NEUROD4Q9HD90 331 aa5.65□□□□□ -1.5
SNHG1-202ENST00000535689 POLMQ9NP87 494 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-202ENST00000535689 FAM13BQ9NYF5 915 aa5.65□□□□□ -1.5
SNHG1-202ENST00000535689 CXXC1Q9P0U4 656 aaPredicted RBP5.65□□□□□ -1.5
SNHG1-202ENST00000535689 EGFL7Q9UHF1 273 aa5.65□□□□□ -1.5
SNHG1-202ENST00000535689 SERTAD1Q9UHV2 236 aa5.65□□□□□ -1.5
SNHG1-202ENST00000535689 SERTM1A2A2V5 107 aa5.64□□□□□ -1.51
SNHG1-202ENST00000535689 SPINT1O43278 529 aa5.64□□□□□ -1.51
SNHG1-202ENST00000535689 TATP17735 454 aaPredicted RBP5.64□□□□□ -1.51
SNHG1-202ENST00000535689 WEE1P30291 646 aa5.64□□□□□ -1.51
SNHG1-202ENST00000535689 SCNN1DP51172 638 aa5.64□□□□□ -1.51
SNHG1-202ENST00000535689 ALKBH2Q6NS38 261 aa5.64□□□□□ -1.51
SNHG1-202ENST00000535689 MRPL14Q6P1L8 145 aaKnown RBP5.64□□□□□ -1.51
SNHG1-202ENST00000535689 PPARGC1BQ86YN6 1023 aaKnown RBP5.64□□□□□ -1.51
SNHG1-202ENST00000535689 CRIPAKQ8N1N5 446 aa5.64□□□□□ -1.51
SNHG1-202ENST00000535689 TSEN2Q8NCE0 465 aaKnown RBP5.64□□□□□ -1.51
SNHG1-202ENST00000535689 SCG3Q8WXD2 468 aaKnown RBP5.64□□□□□ -1.51
SNHG1-202ENST00000535689 CABP1Q9NZU7 370 aa5.64□□□□□ -1.51
SNHG1-202ENST00000535689 SCHIP1Q9P0W5 487 aaPredicted RBP5.64□□□□□ -1.51
SNHG1-202ENST00000535689 ANKIB1Q9P2G1 1089 aa5.64□□□□□ -1.51
SNHG1-202ENST00000535689 KIAA1024Q9UPX6 916 aa5.64□□□□□ -1.51
SNHG1-202ENST00000535689 NCAPD3P42695 1498 aa5.64□□□□□ -1.51
SNHG1-202ENST00000535689 PRMT3O60678 531 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms