RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 MTFR1LQ9H019 292 aa12.74□□□□□ -0.37
CDCA3-204ENST00000535406 TFCP2L1Q9NZI6 479 aa12.74□□□□□ -0.37
CDCA3-204ENST00000535406 HMOX1P09601 288 aa12.73□□□□□ -0.37
CDCA3-204ENST00000535406 HMGB2P26583 209 aaKnown RBP12.73□□□□□ -0.37
CDCA3-204ENST00000535406 C4BP0C0L5 1744 aa12.72□□□□□ -0.37
CDCA3-204ENST00000535406 PNPLA7Q6ZV29 1317 aa12.72□□□□□ -0.37
CDCA3-204ENST00000535406 ERVV-2B6SEH9 535 aa12.72□□□□□ -0.37
CDCA3-204ENST00000535406 CFAP53Q96M91 514 aa12.71□□□□□ -0.37
CDCA3-204ENST00000535406 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.37
CDCA3-204ENST00000535406 LOC102724428A0A0B4J2F2 783 aa12.7□□□□□ -0.38
CDCA3-204ENST00000535406 U2SURPO15042 1029 aaKnown RBP12.7□□□□□ -0.38
CDCA3-204ENST00000535406 PTGER2P43116 358 aa12.7□□□□□ -0.38
CDCA3-204ENST00000535406 SIK1P57059 783 aa12.7□□□□□ -0.38
CDCA3-204ENST00000535406 CABP4P57796 275 aa12.7□□□□□ -0.38
CDCA3-204ENST00000535406 ASAP1Q9ULH1 1129 aa12.7□□□□□ -0.38
CDCA3-204ENST00000535406 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
CDCA3-204ENST00000535406 AKAP4Q5JQC9 854 aa12.69□□□□□ -0.38
CDCA3-204ENST00000535406 SLC16A10Q8TF71 515 aa12.69□□□□□ -0.38
CDCA3-204ENST00000535406 ATG3Q9NT62 314 aa12.69□□□□□ -0.38
CDCA3-204ENST00000535406 PPP2R1AP30153 589 aa12.68□□□□□ -0.38
CDCA3-204ENST00000535406 AK7Q96M32 723 aa12.68□□□□□ -0.38
CDCA3-204ENST00000535406 COL24A1Q17RW2 1714 aa12.68□□□□□ -0.38
CDCA3-204ENST00000535406 UBR3Q6ZT12 1888 aa12.68□□□□□ -0.38
CDCA3-204ENST00000535406 ZNF831Q5JPB2 1677 aa12.68□□□□□ -0.38
CDCA3-204ENST00000535406 MRC1P22897 1456 aa12.68□□□□□ -0.38
CDCA3-204ENST00000535406 ATP6V1AP38606 617 aa12.67□□□□□ -0.38
CDCA3-204ENST00000535406 SGIP1Q9BQI5 828 aa12.67□□□□□ -0.38
CDCA3-204ENST00000535406 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
CDCA3-204ENST00000535406 ADAMTS7Q9UKP4 1686 aa12.66□□□□□ -0.38
CDCA3-204ENST00000535406 POLD1P28340 1107 aa12.66□□□□□ -0.38
CDCA3-204ENST00000535406 MTHFSDQ2M296 383 aaKnown RBP12.66□□□□□ -0.38
CDCA3-204ENST00000535406 LINC00116Q8NCU8 138 aa12.66□□□□□ -0.38
CDCA3-204ENST00000535406 FLAD1Q8NFF5 587 aa12.66□□□□□ -0.38
CDCA3-204ENST00000535406 NUDCQ9Y266 331 aa12.66□□□□□ -0.38
CDCA3-204ENST00000535406 COL5A3P25940 1745 aaPredicted RBP12.66□□□□□ -0.38
CDCA3-204ENST00000535406 ITPK1Q13572 414 aa12.65□□□□□ -0.38
CDCA3-204ENST00000535406 COL23A1Q86Y22 540 aaPredicted RBP12.65□□□□□ -0.38
CDCA3-204ENST00000535406 NFATC2IPQ8NCF5 419 aa12.65□□□□□ -0.38
CDCA3-204ENST00000535406 ARXQ96QS3 562 aa12.65□□□□□ -0.38
CDCA3-204ENST00000535406 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
CDCA3-204ENST00000535406 PHF14O94880 888 aa12.64□□□□□ -0.39
CDCA3-204ENST00000535406 FHDC1Q9C0D6 1143 aaPredicted RBP12.64□□□□□ -0.39
CDCA3-204ENST00000535406 SLC52A2Q9HAB3 445 aa12.64□□□□□ -0.39
CDCA3-204ENST00000535406 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
CDCA3-204ENST00000535406 CICQ96RK0 1608 aaPredicted RBP12.64□□□□□ -0.39
CDCA3-204ENST00000535406 GNPATO15228 680 aa12.63□□□□□ -0.39
CDCA3-204ENST00000535406 RNMTO43148 476 aaKnown RBP12.63□□□□□ -0.39
CDCA3-204ENST00000535406 SSFA2P28290 1259 aa12.63□□□□□ -0.39
CDCA3-204ENST00000535406 PRKAR2BP31323 418 aa12.63□□□□□ -0.39
CDCA3-204ENST00000535406 GAS2L2Q8NHY3 880 aa12.63□□□□□ -0.39
CDCA3-204ENST00000535406 RSPH6AQ9H0K4 717 aa12.63□□□□□ -0.39
CDCA3-204ENST00000535406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.62□□□□□ -0.39
CDCA3-204ENST00000535406 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
CDCA3-204ENST00000535406 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
CDCA3-204ENST00000535406 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDCA3-204ENST00000535406 MSL1Q68DK7 614 aa12.62□□□□□ -0.39
CDCA3-204ENST00000535406 AMIGO3Q86WK7 504 aa12.62□□□□□ -0.39
CDCA3-204ENST00000535406 SLC4A9Q96Q91 983 aa12.62□□□□□ -0.39
CDCA3-204ENST00000535406 LGR6Q9HBX8 967 aa12.62□□□□□ -0.39
CDCA3-204ENST00000535406 TJP1Q07157 1748 aa12.62□□□□□ -0.39
CDCA3-204ENST00000535406 SPDYE4A6NLX3 237 aa12.62□□□□□ -0.39
CDCA3-204ENST00000535406 SYT17Q9BSW7 474 aa12.62□□□□□ -0.39
CDCA3-204ENST00000535406 CNTNAP4Q9C0A0 1308 aa12.61□□□□□ -0.39
CDCA3-204ENST00000535406 GNAT3A8MTJ3 354 aa12.61□□□□□ -0.39
CDCA3-204ENST00000535406 DDX10Q13206 875 aaKnown RBP12.61□□□□□ -0.39
CDCA3-204ENST00000535406 SMIM5Q71RC9 77 aa12.61□□□□□ -0.39
CDCA3-204ENST00000535406 KLHL34Q8N239 644 aa12.61□□□□□ -0.39
CDCA3-204ENST00000535406 UBR2Q8IWV8 1755 aa12.6□□□□□ -0.39
CDCA3-204ENST00000535406 KCPQ6ZWJ8 1503 aa12.6□□□□□ -0.39
CDCA3-204ENST00000535406 ZEB1P37275 1124 aaPredicted RBP12.6□□□□□ -0.39
CDCA3-204ENST00000535406 PHACTR3Q96KR7 559 aa12.6□□□□□ -0.39
CDCA3-204ENST00000535406 RTCBQ9Y3I0 505 aaKnown RBP12.6□□□□□ -0.39
CDCA3-204ENST00000535406 SIPA1L3O60292 1781 aaPredicted RBP12.59□□□□□ -0.39
CDCA3-204ENST00000535406 C4AP0C0L4 1744 aa12.59□□□□□ -0.39
CDCA3-204ENST00000535406 FCHSD2O94868 740 aa12.59□□□□□ -0.39
CDCA3-204ENST00000535406 TEFQ10587 303 aa12.59□□□□□ -0.39
CDCA3-204ENST00000535406 RALBP1Q15311 655 aa12.59□□□□□ -0.39
CDCA3-204ENST00000535406 RC3H1Q5TC82 1133 aaKnown RBP12.59□□□□□ -0.39
CDCA3-204ENST00000535406 MYH14Q7Z406 1995 aaKnown RBP12.59□□□□□ -0.39
CDCA3-204ENST00000535406 SLC39A6Q13433 755 aa12.58□□□□□ -0.4
CDCA3-204ENST00000535406 CEMIPQ8WUJ3 1361 aa12.57□□□□□ -0.4
CDCA3-204ENST00000535406 NEFMP07197 916 aa12.57□□□□□ -0.4
CDCA3-204ENST00000535406 CRKLP46109 303 aaKnown RBP12.57□□□□□ -0.4
CDCA3-204ENST00000535406 TRAPPC3LQ5T215 181 aa12.57□□□□□ -0.4
CDCA3-204ENST00000535406 TTC5Q8N0Z6 440 aa12.57□□□□□ -0.4
CDCA3-204ENST00000535406 IL17REQ8NFR9 667 aa12.57□□□□□ -0.4
CDCA3-204ENST00000535406 RPS6KA4O75676 772 aa12.56□□□□□ -0.4
CDCA3-204ENST00000535406 DNAJC10Q8IXB1 793 aa12.56□□□□□ -0.4
CDCA3-204ENST00000535406 RTF1Q92541 710 aaKnown RBP12.56□□□□□ -0.4
CDCA3-204ENST00000535406 UTRNP46939 3433 aa12.55□□□□□ -0.4
CDCA3-204ENST00000535406 MKRN4PQ13434 485 aaPredicted RBP12.55□□□□□ -0.4
CDCA3-204ENST00000535406 ARHGEF1Q92888 912 aaKnown RBP12.55□□□□□ -0.4
CDCA3-204ENST00000535406 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
CDCA3-204ENST00000535406 GOLGB1Q14789 3259 aaKnown RBP12.54□□□□□ -0.4
CDCA3-204ENST00000535406 RFC4P35249 363 aa12.54□□□□□ -0.4
CDCA3-204ENST00000535406 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
CDCA3-204ENST00000535406 NLGN2Q8NFZ4 835 aa12.54□□□□□ -0.4
CDCA3-204ENST00000535406 CCDC87Q9NVE4 849 aa12.54□□□□□ -0.4
CDCA3-204ENST00000535406 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
CDCA3-204ENST00000535406 INTS5Q6P9B9 1019 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms